RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 NEDD8-MDP1E9PL57 170 aa18.07■□□□□ 0.48
TPM1-214ENST00000558544 SGSHP51688 502 aa18.07■□□□□ 0.48
TPM1-214ENST00000558544 PRKCQQ04759 706 aa18.07■□□□□ 0.48
TPM1-214ENST00000558544 GAD2Q05329 585 aa18.07■□□□□ 0.48
TPM1-214ENST00000558544 GAB4Q2WGN9 574 aa18.07■□□□□ 0.48
TPM1-214ENST00000558544 MS4A13Q5J8X5 152 aa18.07■□□□□ 0.48
TPM1-214ENST00000558544 DAB2IPQ5VWQ8 1189 aa18.07■□□□□ 0.48
TPM1-214ENST00000558544 SCYL2Q6P3W7 929 aa18.07■□□□□ 0.48
TPM1-214ENST00000558544 CCDC185Q8N715 623 aa18.07■□□□□ 0.48
TPM1-214ENST00000558544 SLC35G2Q8TBE7 412 aa18.07■□□□□ 0.48
TPM1-214ENST00000558544 RFFLQ8WZ73 363 aa18.07■□□□□ 0.48
TPM1-214ENST00000558544 DDX50Q9BQ39 737 aaKnown RBP18.07■□□□□ 0.48
TPM1-214ENST00000558544 EPHX3Q9H6B9 360 aa18.07■□□□□ 0.48
TPM1-214ENST00000558544 TMEM51Q9NW97 253 aa18.07■□□□□ 0.48
TPM1-214ENST00000558544 PLK2Q9NYY3 685 aa18.07■□□□□ 0.48
TPM1-214ENST00000558544 MARK1Q9P0L2 795 aa18.07■□□□□ 0.48
TPM1-214ENST00000558544 IP6K2Q9UHH9 426 aa18.07■□□□□ 0.48
TPM1-214ENST00000558544 HS3ST4Q9Y661 456 aa18.07■□□□□ 0.48
TPM1-214ENST00000558544 HOXC11O43248 304 aaPredicted RBP18.06■□□□□ 0.48
TPM1-214ENST00000558544 CYBBP04839 570 aa18.06■□□□□ 0.48
TPM1-214ENST00000558544 TYRP14679 529 aa18.06■□□□□ 0.48
TPM1-214ENST00000558544 TACR2P21452 398 aa18.06■□□□□ 0.48
TPM1-214ENST00000558544 CD72P21854 359 aa18.06■□□□□ 0.48
TPM1-214ENST00000558544 CCZ1BP86790 482 aa18.06■□□□□ 0.48
TPM1-214ENST00000558544 CCZ1P86791 482 aaPredicted RBP18.06■□□□□ 0.48
TPM1-214ENST00000558544 ARL13BQ3SXY8 428 aa18.06■□□□□ 0.48
TPM1-214ENST00000558544 FYB2Q5VWT5 728 aa18.06■□□□□ 0.48
TPM1-214ENST00000558544 NAIF1Q69YI7 327 aaPredicted RBP18.06■□□□□ 0.48
TPM1-214ENST00000558544 TXNDC11Q6PKC3 985 aa18.06■□□□□ 0.48
TPM1-214ENST00000558544 C12orf40Q86WS4 652 aa18.06■□□□□ 0.48
TPM1-214ENST00000558544 RALGPS2Q86X27 583 aaPredicted RBP18.06■□□□□ 0.48
TPM1-214ENST00000558544 RHOT2Q8IXI1 618 aa18.06■□□□□ 0.48
TPM1-214ENST00000558544 LGI2Q8N0V4 545 aa18.06■□□□□ 0.48
TPM1-214ENST00000558544 ARFGAP1Q8N6T3 406 aa18.06■□□□□ 0.48
TPM1-214ENST00000558544 NAT16Q8N8M0 369 aa18.06■□□□□ 0.48
TPM1-214ENST00000558544 DDI1Q8WTU0 396 aa18.06■□□□□ 0.48
TPM1-214ENST00000558544 MYEOVQ96EZ4 313 aa18.06■□□□□ 0.48
TPM1-214ENST00000558544 PRICKLE1Q96MT3 831 aaPredicted RBP18.06■□□□□ 0.48
TPM1-214ENST00000558544 PRMT1Q99873 361 aaKnown RBP18.06■□□□□ 0.48
TPM1-214ENST00000558544 SIK2Q9H0K1 926 aa18.06■□□□□ 0.48
TPM1-214ENST00000558544 SNX10Q9Y5X0 201 aa18.06■□□□□ 0.48
TPM1-214ENST00000558544 RCCD1A6NED2 376 aa18.05■□□□□ 0.48
TPM1-214ENST00000558544 SHISA7A6NL88 538 aa18.05■□□□□ 0.48
TPM1-214ENST00000558544 F5H5T6 163 aa18.05■□□□□ 0.48
TPM1-214ENST00000558544 MYO1FO00160 1098 aa18.05■□□□□ 0.48
TPM1-214ENST00000558544 GFRA2O00451 464 aa18.05■□□□□ 0.48
TPM1-214ENST00000558544 ARHGAP6O43182 974 aa18.05■□□□□ 0.48
TPM1-214ENST00000558544 LRCH4O75427 683 aa18.05■□□□□ 0.48
TPM1-214ENST00000558544 RNF8O76064 485 aa18.05■□□□□ 0.48
TPM1-214ENST00000558544 PTMAP06454 111 aaKnown RBP18.05■□□□□ 0.48
TPM1-214ENST00000558544 GLULP15104 373 aa18.05■□□□□ 0.48
TPM1-214ENST00000558544 VAV2P52735 878 aa18.05■□□□□ 0.48
TPM1-214ENST00000558544 MLLT6P55198 1093 aaPredicted RBP18.05■□□□□ 0.48
TPM1-214ENST00000558544 MTA1Q13330 715 aa18.05■□□□□ 0.48
TPM1-214ENST00000558544 PIGHQ14442 188 aaPredicted RBP18.05■□□□□ 0.48
TPM1-214ENST00000558544 MPPE1Q53F39 396 aa18.05■□□□□ 0.48
TPM1-214ENST00000558544 KIAA1328Q86T90 577 aa18.05■□□□□ 0.48
TPM1-214ENST00000558544 MSANTD3Q96H12 275 aa18.05■□□□□ 0.48
TPM1-214ENST00000558544 ATG2BQ96BY7 2078 aa18.05■□□□□ 0.48
TPM1-214ENST00000558544 TMEM221A6NGB7 291 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 TMEM110-MUSTN1A8MSY1 372 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 M0R296 226 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 MTA2O94776 668 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 PDGFBP01127 241 aaPredicted RBP18.04■□□□□ 0.48
TPM1-214ENST00000558544 PENKP01210 267 aaPredicted RBP18.04■□□□□ 0.48
TPM1-214ENST00000558544 MIPP30301 263 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 ADRA1BP35368 520 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 OPRD1P41143 372 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 SLC6A11P48066 632 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 STARD6P59095 220 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 KRT83P78385 493 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 AMPD2Q01433 879 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 AUHQ13825 339 aaKnown RBP18.04■□□□□ 0.48
TPM1-214ENST00000558544 PON2Q15165 354 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 C14orf80Q86SX3 495 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 CFAP52Q8N1V2 620 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 NIPA2Q8N8Q9 360 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 HJURPQ8NCD3 748 aaPredicted RBP18.04■□□□□ 0.48
TPM1-214ENST00000558544 FAM3CQ92520 227 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 NTAN1Q96AB6 310 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 TMA16Q96EY4 203 aaKnown RBP18.04■□□□□ 0.48
TPM1-214ENST00000558544 SHDQ96IW2 340 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 HAPLN3Q96S86 360 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 PEBP4Q96S96 227 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 PPP1R9BQ96SB3 815 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 TBC1D17Q9HA65 648 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 PCSK1NQ9UHG2 260 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 VANGL2Q9ULK5 521 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 CUL9Q8IWT3 2517 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 TYW5A2RUC4 315 aaKnown RBP18.04■□□□□ 0.48
TPM1-214ENST00000558544 MAN2B1O00754 1011 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 NRDCO43847 1150 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 TBL1XO60907 577 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 TCF4P15884 667 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 HOXD9P28356 352 aaPredicted RBP18.04■□□□□ 0.48
TPM1-214ENST00000558544 RPS24P62847 133 aaKnown RBP18.04■□□□□ 0.48
TPM1-214ENST00000558544 KDSRQ06136 332 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 ACAP1Q15027 740 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 FBXL22Q6P050 247 aa18.04■□□□□ 0.48
TPM1-214ENST00000558544 ZNF852Q6ZMS4 543 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms