RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 AIPL1Q9NZN9 384 aa23.72■■□□□ 1.39
TDP1-216ENST00000556867 XPO7Q9UIA9 1087 aaKnown RBP23.72■■□□□ 1.39
TDP1-216ENST00000556867 TMEM59LQ9UK28 342 aa23.72■■□□□ 1.39
TDP1-216ENST00000556867 HCN2Q9UL51 889 aa23.72■■□□□ 1.39
TDP1-216ENST00000556867 CLEC4EQ9ULY5 219 aa23.72■■□□□ 1.39
TDP1-216ENST00000556867 DMDP11532 3685 aa23.72■■□□□ 1.39
TDP1-216ENST00000556867 KCNU1A8MYU2 1149 aa23.71■■□□□ 1.39
TDP1-216ENST00000556867 M0QYT0 321 aa23.71■■□□□ 1.39
TDP1-216ENST00000556867 FLT3P36888 993 aa23.71■■□□□ 1.39
TDP1-216ENST00000556867 MRE11P49959 708 aa23.71■■□□□ 1.39
TDP1-216ENST00000556867 GSCP56915 257 aaPredicted RBP23.71■■□□□ 1.39
TDP1-216ENST00000556867 ASIC2Q16515 512 aa23.71■■□□□ 1.39
TDP1-216ENST00000556867 EOGTQ5NDL2 527 aa23.71■■□□□ 1.39
TDP1-216ENST00000556867 HEATR6Q6AI08 1181 aaKnown RBP23.71■■□□□ 1.39
TDP1-216ENST00000556867 ANKS1BQ7Z6G8 1248 aa23.71■■□□□ 1.39
TDP1-216ENST00000556867 WDR5BQ86VZ2 330 aa23.71■■□□□ 1.39
TDP1-216ENST00000556867 HJURPQ8NCD3 748 aaPredicted RBP23.71■■□□□ 1.39
TDP1-216ENST00000556867 PGAP3Q96FM1 320 aaPredicted RBP23.71■■□□□ 1.39
TDP1-216ENST00000556867 HHIPQ96QV1 700 aa23.71■■□□□ 1.39
TDP1-216ENST00000556867 SEPT11Q9NVA2 429 aaKnown RBP23.71■■□□□ 1.39
TDP1-216ENST00000556867 IFNKQ9P0W0 207 aa23.71■■□□□ 1.39
TDP1-216ENST00000556867 SLC12A6Q9UHW9 1150 aa23.71■■□□□ 1.39
TDP1-216ENST00000556867 RIF1Q5UIP0 2472 aaKnown RBP23.7■■□□□ 1.38
TDP1-216ENST00000556867 SYNJ2BP-COX16A0A087WUM0 186 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 A0A1W2PQJ5 194 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 PRR23AA6NEV1 266 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 SGK1O00141 431 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 APBB3O95704 486 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 PRKCIP41743 596 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 NME3Q13232 169 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 MTA1Q13330 715 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 CRY1Q16526 586 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 GEN1Q17RS7 908 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 SLC25A52Q3SY17 297 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 MS4A13Q5J8X5 152 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 SFMBT2Q5VUG0 894 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 EGFLAMQ63HQ2 1017 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 E4F1Q66K89 784 aaPredicted RBP23.7■■□□□ 1.38
TDP1-216ENST00000556867 TRNP1Q6NT89 227 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 OLIG1Q8TAK6 271 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 RNF34Q969K3 372 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 IQCDQ96DY2 449 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 ADAM33Q9BZ11 813 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 METTL5Q9NRN9 209 aaKnown RBP23.7■■□□□ 1.38
TDP1-216ENST00000556867 TMEM51Q9NW97 253 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 ADAM22Q9P0K1 906 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 COX16Q9P0S2 106 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 CALCOCO1Q9P1Z2 691 aa23.7■■□□□ 1.38
TDP1-216ENST00000556867 EML5Q05BV3 1969 aa23.69■■□□□ 1.38
TDP1-216ENST00000556867 TYW5A2RUC4 315 aaKnown RBP23.69■■□□□ 1.38
TDP1-216ENST00000556867 TBL1XO60907 577 aa23.69■■□□□ 1.38
TDP1-216ENST00000556867 ADAM23O75077 832 aa23.69■■□□□ 1.38
TDP1-216ENST00000556867 CALB1P05937 261 aa23.69■■□□□ 1.38
TDP1-216ENST00000556867 TFE3P19532 575 aaPredicted RBP23.69■■□□□ 1.38
TDP1-216ENST00000556867 ABCB4P21439 1286 aa23.69■■□□□ 1.38
TDP1-216ENST00000556867 HOXD11P31277 338 aaPredicted RBP23.69■■□□□ 1.38
TDP1-216ENST00000556867 SULT1E1P49888 294 aa23.69■■□□□ 1.38
TDP1-216ENST00000556867 MON1BQ7L1V2 547 aa23.69■■□□□ 1.38
TDP1-216ENST00000556867 CHSY1Q86X52 802 aa23.69■■□□□ 1.38
TDP1-216ENST00000556867 ZNF557Q8N988 423 aaPredicted RBP23.69■■□□□ 1.38
TDP1-216ENST00000556867 TSTD1Q8NFU3 115 aa23.69■■□□□ 1.38
TDP1-216ENST00000556867 MYEOVQ96EZ4 313 aa23.69■■□□□ 1.38
TDP1-216ENST00000556867 EPC1Q9H2F5 836 aa23.69■■□□□ 1.38
TDP1-216ENST00000556867 ZDHHC4Q9NPG8 344 aa23.69■■□□□ 1.38
TDP1-216ENST00000556867 PIGVQ9NUD9 493 aa23.69■■□□□ 1.38
TDP1-216ENST00000556867 FAM186AA6NE01 2351 aa23.69■■□□□ 1.38
TDP1-216ENST00000556867 GPR179Q6PRD1 2367 aa23.69■■□□□ 1.38
TDP1-216ENST00000556867 F9P00740 461 aa23.68■■□□□ 1.38
TDP1-216ENST00000556867 HNRNPLP14866 589 aaKnown RBP eCLIP23.68■■□□□ 1.38
TDP1-216ENST00000556867 TACR2P21452 398 aa23.68■■□□□ 1.38
TDP1-216ENST00000556867 HLA-FP30511 346 aa23.68■■□□□ 1.38
TDP1-216ENST00000556867 CNR2P34972 360 aa23.68■■□□□ 1.38
TDP1-216ENST00000556867 CXCR3P49682 368 aa23.68■■□□□ 1.38
TDP1-216ENST00000556867 DGKEP52429 567 aa23.68■■□□□ 1.38
TDP1-216ENST00000556867 RPS24P62847 133 aaKnown RBP23.68■■□□□ 1.38
TDP1-216ENST00000556867 C1QBPQ07021 282 aaKnown RBP23.68■■□□□ 1.38
TDP1-216ENST00000556867 EIF4HQ15056 248 aaKnown RBP23.68■■□□□ 1.38
TDP1-216ENST00000556867 BRMS1LQ5PSV4 323 aa23.68■■□□□ 1.38
TDP1-216ENST00000556867 RAP1GAP2Q684P5 730 aa23.68■■□□□ 1.38
TDP1-216ENST00000556867 TMEM92Q6UXU6 159 aa23.68■■□□□ 1.38
TDP1-216ENST00000556867 ASCL5Q7RTU5 278 aa23.68■■□□□ 1.38
TDP1-216ENST00000556867 BNIPLQ7Z465 357 aa23.68■■□□□ 1.38
TDP1-216ENST00000556867 ALYREFQ86V81 257 aaKnown RBP23.68■■□□□ 1.38
TDP1-216ENST00000556867 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.68■■□□□ 1.38
TDP1-216ENST00000556867 TBCBQ99426 244 aa23.68■■□□□ 1.38
TDP1-216ENST00000556867 PRMT1Q99873 361 aaKnown RBP23.68■■□□□ 1.38
TDP1-216ENST00000556867 EBF1Q9UH73 591 aa23.68■■□□□ 1.38
TDP1-216ENST00000556867 OTOGLQ3ZCN5 2332 aa23.68■■□□□ 1.38
TDP1-216ENST00000556867 GFRA3O60609 400 aa23.67■■□□□ 1.38
TDP1-216ENST00000556867 LMNAP02545 664 aaKnown RBP23.67■■□□□ 1.38
TDP1-216ENST00000556867 TPM3P06753 285 aa23.67■■□□□ 1.38
TDP1-216ENST00000556867 TNFAIP3P21580 790 aa23.67■■□□□ 1.38
TDP1-216ENST00000556867 NTSR1P30989 418 aa23.67■■□□□ 1.38
TDP1-216ENST00000556867 PXNP49023 591 aaPredicted RBP23.67■■□□□ 1.38
TDP1-216ENST00000556867 PPP1R2P3Q6NXS1 205 aa23.67■■□□□ 1.38
TDP1-216ENST00000556867 KIAA0907Q7Z7F0 614 aaPredicted RBP23.67■■□□□ 1.38
TDP1-216ENST00000556867 RASSF3Q86WH2 238 aa23.67■■□□□ 1.38
TDP1-216ENST00000556867 LGI2Q8N0V4 545 aa23.67■■□□□ 1.38
TDP1-216ENST00000556867 SUMF1Q8NBK3 374 aa23.67■■□□□ 1.38
TDP1-216ENST00000556867 C3orf20Q8ND61 904 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms