RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 ZNF487B1APH4 448 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 NRG2O14511 850 aaPredicted RBP11.42□□□□□ -0.58
TMEM260-208ENST00000555905 ZNF185O15231 689 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 STC2O76061 302 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 CORO1AP31146 461 aaKnown RBP11.42□□□□□ -0.58
TMEM260-208ENST00000555905 L1CAMP32004 1257 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 PTPN7P35236 360 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 CDKN2BP42772 138 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 MTHFRP42898 656 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 PAFAH1B1P43034 410 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 ARSEP51690 589 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 KCNQ1P51787 676 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 DLX2Q07687 328 aaPredicted RBP11.42□□□□□ -0.58
TMEM260-208ENST00000555905 DPYSL3Q14195 570 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 PPP2R5EQ16537 467 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 CA9Q16790 459 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 WHAMMP3Q1A5X7 153 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 TFDP3Q5H9I0 405 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 MFSD7Q6UXD7 560 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 Q7L0L9 218 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 VSIG1Q86XK7 387 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 DEFB123Q8N688 67 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 TTC16Q8NEE8 873 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 FAM71BQ8TC56 605 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 MYLIPQ8WY64 445 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 AZIN2Q96A70 460 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 ZFRQ96KR1 1074 aaKnown RBP11.42□□□□□ -0.58
TMEM260-208ENST00000555905 CAPZA3Q96KX2 299 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 C1orf74Q96LT6 269 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 KCTD15Q96SI1 283 aaPredicted RBP11.42□□□□□ -0.58
TMEM260-208ENST00000555905 DDX50Q9BQ39 737 aaKnown RBP11.42□□□□□ -0.58
TMEM260-208ENST00000555905 ZNF670Q9BS34 389 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 S1PR5Q9H228 398 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 PCDH18Q9HCL0 1135 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 RRAGDQ9NQL2 400 aaPredicted RBP11.42□□□□□ -0.58
TMEM260-208ENST00000555905 TMPRSS4Q9NRS4 437 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 RCOR3Q9P2K3 495 aaPredicted RBP11.42□□□□□ -0.58
TMEM260-208ENST00000555905 OR12D3Q9UGF7 316 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 ZNF510Q9Y2H8 683 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 SH3BP1Q9Y3L3 701 aa11.42□□□□□ -0.58
TMEM260-208ENST00000555905 NUP210Q8TEM1 1887 aaPredicted RBP11.41□□□□□ -0.58
TMEM260-208ENST00000555905 PGRMC1O00264 195 aaKnown RBP11.41□□□□□ -0.58
TMEM260-208ENST00000555905 EEF2KO00418 725 aaKnown RBP11.41□□□□□ -0.58
TMEM260-208ENST00000555905 DAPK3O43293 454 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 CREB3O43889 395 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 ACSL4O60488 711 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 TJP3O95049 919 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 LATS1O95835 1130 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 FGGP02679 453 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 CD48P09326 243 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 FOSL2P15408 326 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 WEE1P30291 646 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 HTR7P34969 479 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 LTBRP36941 435 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 HCAR3P49019 387 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 TPI1P60174 286 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 NRG1Q02297 640 aaPredicted RBP11.41□□□□□ -0.58
TMEM260-208ENST00000555905 CKAP4Q07065 602 aaKnown RBP11.41□□□□□ -0.58
TMEM260-208ENST00000555905 TFDP2Q14188 446 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 SKIV2LQ15477 1246 aaKnown RBP11.41□□□□□ -0.58
TMEM260-208ENST00000555905 TAZQ16635 292 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 LONRF2Q1L5Z9 754 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 ANKRD20A8PQ5CZ79 823 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 AADACL2Q6P093 401 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 LRRC31Q6UY01 552 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 GET4Q7L5D6 327 aaPredicted RBP11.41□□□□□ -0.58
TMEM260-208ENST00000555905 RFX6Q8HWS3 928 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 DENND1CQ8IV53 801 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 NPAS3Q8IXF0 933 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 PYROXD2Q8N2H3 581 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 RASGEF1CQ8N431 466 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 ZSCAN18Q8TBC5 510 aaPredicted RBP11.41□□□□□ -0.58
TMEM260-208ENST00000555905 ACTRT1Q8TDG2 376 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.41□□□□□ -0.58
TMEM260-208ENST00000555905 MAIP1Q8WWC4 291 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 TSC1Q92574 1164 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 MS4A14Q96JA4 679 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 MSLNLQ96KJ4 702 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 ZSWIM3Q96MP5 696 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 NECTIN4Q96NY8 510 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 OSBPL8Q9BZF1 889 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 PRDM16Q9HAZ2 1276 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 ANLNQ9NQW6 1124 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 TDP1Q9NUW8 608 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 MTMR10Q9NXD2 777 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 GDE1Q9NZC3 331 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 STIM2Q9P246 746 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 CFAP97Q9P2B7 532 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 CD207Q9UJ71 328 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 TTC7AQ9ULT0 858 aaPredicted RBP11.41□□□□□ -0.58
TMEM260-208ENST00000555905 EFR3BQ9Y2G0 817 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 MRFAP1Q9Y605 127 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 HS3ST4Q9Y661 456 aa11.41□□□□□ -0.58
TMEM260-208ENST00000555905 hCG_1818297A0A087WSY0 165 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 E2F8A0AVK6 867 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 I6L893 689 aaPredicted RBP11.4□□□□□ -0.58
TMEM260-208ENST00000555905 LEFTY2O00292 366 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 GOT1P17174 413 aa11.4□□□□□ -0.58
TMEM260-208ENST00000555905 MLLT6P55198 1093 aaPredicted RBP11.4□□□□□ -0.58
TMEM260-208ENST00000555905 MMRN1Q13201 1228 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms