RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 KRT77Q7Z794 578 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 CACNA2D3Q8IZS8 1091 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 CNPY4Q8N129 248 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 OR8H2Q8N162 312 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 RNF152Q8N8N0 203 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 TRAPPC12Q8WVT3 735 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 ZSCAN31Q96LW9 406 aaPredicted RBP5.98□□□□□ -1.45
VRK1-203ENST00000555067 RSPH9Q9H1X1 276 aaPredicted RBP5.98□□□□□ -1.45
VRK1-203ENST00000555067 STK32BQ9NY57 414 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 GGA3Q9NZ52 723 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 USP19O94966 1318 aa5.98□□□□□ -1.45
VRK1-203ENST00000555067 AQP7P3A6NL99 342 aa5.97□□□□□ -1.45
VRK1-203ENST00000555067 A8MVJ9 347 aa5.97□□□□□ -1.45
VRK1-203ENST00000555067 K7ENM7 598 aa5.97□□□□□ -1.45
VRK1-203ENST00000555067 OAZ2O95190 189 aa5.97□□□□□ -1.45
VRK1-203ENST00000555067 HARSP12081 509 aaKnown RBP5.97□□□□□ -1.45
VRK1-203ENST00000555067 RPL17P18621 184 aaKnown RBP5.97□□□□□ -1.45
VRK1-203ENST00000555067 CCKARP32238 428 aa5.97□□□□□ -1.45
VRK1-203ENST00000555067 GATMP50440 423 aa5.97□□□□□ -1.45
VRK1-203ENST00000555067 ARL4CP56559 192 aa5.97□□□□□ -1.45
VRK1-203ENST00000555067 RPS13P62277 151 aaKnown RBP5.97□□□□□ -1.45
VRK1-203ENST00000555067 TAF12Q16514 161 aa5.97□□□□□ -1.45
VRK1-203ENST00000555067 ST3GAL2Q16842 350 aa5.97□□□□□ -1.45
VRK1-203ENST00000555067 MPEG1Q2M385 716 aa5.97□□□□□ -1.45
VRK1-203ENST00000555067 TRIM71Q2Q1W2 868 aaKnown RBP5.97□□□□□ -1.45
VRK1-203ENST00000555067 ZNF750Q32MQ0 723 aa5.97□□□□□ -1.45
VRK1-203ENST00000555067 GPATCH4Q5T3I0 446 aaKnown RBP5.97□□□□□ -1.45
VRK1-203ENST00000555067 KLHDC7AQ5VTJ3 777 aa5.97□□□□□ -1.45
VRK1-203ENST00000555067 TTLL5Q6EMB2 1281 aa5.97□□□□□ -1.45
VRK1-203ENST00000555067 C16orf71Q8IYS4 520 aaPredicted RBP5.97□□□□□ -1.45
VRK1-203ENST00000555067 CCDC33Q8N5R6 958 aa5.97□□□□□ -1.45
VRK1-203ENST00000555067 HDAC2Q92769 488 aaKnown RBP5.97□□□□□ -1.45
VRK1-203ENST00000555067 HIC2Q96JB3 615 aa5.97□□□□□ -1.45
VRK1-203ENST00000555067 SORBS1Q9BX66 1292 aaKnown RBP5.97□□□□□ -1.45
VRK1-203ENST00000555067 STK31Q9BXU1 1019 aa5.97□□□□□ -1.45
VRK1-203ENST00000555067 ZCWPW1Q9H0M4 648 aa5.97□□□□□ -1.45
VRK1-203ENST00000555067 MAGEH1Q9H213 219 aa5.97□□□□□ -1.45
VRK1-203ENST00000555067 UNC45AQ9H3U1 944 aa5.97□□□□□ -1.45
VRK1-203ENST00000555067 FAM83DQ9H4H8 585 aa5.97□□□□□ -1.45
VRK1-203ENST00000555067 TBC1D22BQ9NU19 505 aa5.97□□□□□ -1.45
VRK1-203ENST00000555067 CPNE7Q9UBL6 633 aa5.97□□□□□ -1.45
VRK1-203ENST00000555067 NKX1-2Q9UD57 310 aaPredicted RBP5.97□□□□□ -1.45
VRK1-203ENST00000555067 B9A039 149 aa5.96□□□□□ -1.46
VRK1-203ENST00000555067 F8W8V4 182 aa5.96□□□□□ -1.46
VRK1-203ENST00000555067 FOXN3O00409 490 aaPredicted RBP5.96□□□□□ -1.46
VRK1-203ENST00000555067 APOL1O14791 398 aa5.96□□□□□ -1.46
VRK1-203ENST00000555067 AREL1O15033 823 aa5.96□□□□□ -1.46
VRK1-203ENST00000555067 TLR2O60603 784 aa5.96□□□□□ -1.46
VRK1-203ENST00000555067 CNOT3O75175 753 aaKnown RBP5.96□□□□□ -1.46
VRK1-203ENST00000555067 SKAP2O75563 359 aaPredicted RBP5.96□□□□□ -1.46
VRK1-203ENST00000555067 GFPT2O94808 682 aa5.96□□□□□ -1.46
VRK1-203ENST00000555067 BAIAP3O94812 1187 aa5.96□□□□□ -1.46
VRK1-203ENST00000555067 HGFP14210 728 aa5.96□□□□□ -1.46
VRK1-203ENST00000555067 ATF7P17544 494 aaPredicted RBP5.96□□□□□ -1.46
VRK1-203ENST00000555067 ACVR2AP27037 513 aa5.96□□□□□ -1.46
VRK1-203ENST00000555067 PRKG1Q13976 671 aa5.96□□□□□ -1.46
VRK1-203ENST00000555067 SLC29A2Q14542 456 aa5.96□□□□□ -1.46
VRK1-203ENST00000555067 NPY5RQ15761 445 aa5.96□□□□□ -1.46
VRK1-203ENST00000555067 PFKFB4Q16877 469 aa5.96□□□□□ -1.46
VRK1-203ENST00000555067 CC2D1BQ5T0F9 858 aaKnown RBP5.96□□□□□ -1.46
VRK1-203ENST00000555067 PIP4P1Q86T03 277 aa5.96□□□□□ -1.46
VRK1-203ENST00000555067 ANKRD13BQ86YJ7 626 aa5.96□□□□□ -1.46
VRK1-203ENST00000555067 ATG16L2Q8NAA4 619 aa5.96□□□□□ -1.46
VRK1-203ENST00000555067 ZBTB10Q96DT7 871 aa5.96□□□□□ -1.46
VRK1-203ENST00000555067 LTV1Q96GA3 475 aaPredicted RBP5.96□□□□□ -1.46
VRK1-203ENST00000555067 ZBTB45Q96K62 511 aaPredicted RBP5.96□□□□□ -1.46
VRK1-203ENST00000555067 RMDN3Q96TC7 470 aa5.96□□□□□ -1.46
VRK1-203ENST00000555067 FOXP1Q9H334 677 aaPredicted RBP5.96□□□□□ -1.46
VRK1-203ENST00000555067 ZNF287Q9HBT7 754 aa5.96□□□□□ -1.46
VRK1-203ENST00000555067 RIC8AQ9NPQ8 531 aa5.96□□□□□ -1.46
VRK1-203ENST00000555067 RIMKLBQ9ULI2 386 aa5.96□□□□□ -1.46
VRK1-203ENST00000555067 PLA2G6O60733 806 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 INMTO95050 263 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 IL18RAPO95256 599 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 POLBP06746 335 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 PARP1P09874 1014 aaKnown RBP5.95□□□□□ -1.46
VRK1-203ENST00000555067 VDRP11473 427 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 CKMT1AP12532 417 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 CNTFP26441 200 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 ELF1P32519 619 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 MCM5P33992 734 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 CPT1AP50416 773 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 LINC00205P59089 165 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 HSF1Q00613 529 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 FMO1Q01740 532 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 PRKG2Q13237 762 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 DAG1Q14118 895 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 MFSD13AQ14CX5 517 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 SEC23BQ15437 767 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 CNGA2Q16280 664 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 ARL13BQ3SXY8 428 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 MIDNQ504T8 468 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 WDR45BQ5MNZ6 344 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 RFX8Q6ZV50 586 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 ANKRD23Q86SG2 305 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 TMTC1Q8IUR5 882 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 ESX1Q8N693 406 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 C12orf76Q8N812 135 aaPredicted RBP5.95□□□□□ -1.46
VRK1-203ENST00000555067 PNPLA1Q8N8W4 532 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 ASB12Q8WXK4 309 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms