RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 SOX5P35711 763 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 SGSHP51688 502 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 PITX1P78337 314 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-213ENST00000554600 SLC6A3Q01959 620 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 SPEM2Q0P670 501 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 NME3Q13232 169 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 NNTQ13423 1086 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 ELF2Q15723 593 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 KLHL40Q2TBA0 621 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 FILIP1LQ4L180 1135 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 FAM102AQ5T9C2 384 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-213ENST00000554600 NAA35Q5VZE5 725 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 NADSYN1Q6IA69 706 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 BEND5Q7L4P6 421 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 CHSY1Q86X52 802 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 LGI2Q8N0V4 545 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 CARNMT1Q8N4J0 409 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 ATP6V0D2Q8N8Y2 350 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 HJURPQ8NCD3 748 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-213ENST00000554600 MDGA1Q8NFP4 955 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 SLC20A1Q8WUM9 679 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 C18orf8Q96DM3 657 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 SPACA7Q96KW9 195 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 ABCB8Q9NUT2 735 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 SEPT11Q9NVA2 429 aaKnown RBP11.07□□□□□ -0.64
SHMT2-213ENST00000554600 ASNSD1Q9NWL6 643 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 STOML2Q9UJZ1 356 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 FBXO10Q9UK96 956 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 HCN2Q9UL51 889 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 SIK3Q9Y2K2 1263 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 SLC27A6Q9Y2P4 619 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 STARD13Q9Y3M8 1113 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 DAAM1Q9Y4D1 1078 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 RAD54BQ9Y620 910 aa11.07□□□□□ -0.64
SHMT2-213ENST00000554600 WASH3PC4AMC7 463 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 LSM8O95777 96 aaKnown RBP11.06□□□□□ -0.64
SHMT2-213ENST00000554600 SLC2A3P11169 496 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 ABCB4P21439 1286 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 RPS24P62847 133 aaKnown RBP11.06□□□□□ -0.64
SHMT2-213ENST00000554600 TPM4P67936 248 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 STARD3Q14849 445 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 E2F5Q15329 346 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 C2CD6Q53TS8 623 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 FAM133BQ5BKY9 247 aaKnown RBP11.06□□□□□ -0.64
SHMT2-213ENST00000554600 PIK3R6Q5UE93 754 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 RAP1GAP2Q684P5 730 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 OLFML1Q6UWY5 402 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 KIAA1324Q6UXG2 1013 aaKnown RBP11.06□□□□□ -0.64
SHMT2-213ENST00000554600 CHST9Q7L1S5 443 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 SLC26A9Q7LBE3 791 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 RASSF3Q86WH2 238 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 ZNF677Q86XU0 584 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 ZDHHC17Q8IUH5 632 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 MFN1Q8IWA4 741 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 DHX40Q8IX18 779 aaKnown RBP11.06□□□□□ -0.64
SHMT2-213ENST00000554600 CFAP52Q8N1V2 620 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 GPR161Q8N6U8 529 aaKnown RBP11.06□□□□□ -0.64
SHMT2-213ENST00000554600 EPS8L1Q8TE68 723 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 WFIKKN2Q8TEU8 576 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 RLN3Q8WXF3 142 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 CPA5Q8WXQ8 436 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 SORCS1Q8WY21 1168 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 AZIN2Q96A70 460 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 SLC39A13Q96H72 371 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 SLC2A13Q96QE2 648 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 ERGIC2Q96RQ1 377 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 BPIFA3Q9BQP9 254 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 NUCKS1Q9H1E3 243 aaKnown RBP11.06□□□□□ -0.64
SHMT2-213ENST00000554600 HSD3B7Q9H2F3 369 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 ARRDC1-AS1Q9H2J1 176 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.06□□□□□ -0.64
SHMT2-213ENST00000554600 ELOVL2Q9NXB9 296 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 STON1Q9Y6Q2 735 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 FRYLO94915 3013 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 ZFHX4Q86UP3 3567 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 KNL1Q8NG31 2342 aa11.06□□□□□ -0.64
SHMT2-213ENST00000554600 MUC22E2RYF6 1773 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-213ENST00000554600 F5H5T6 163 aa11.05□□□□□ -0.64
SHMT2-213ENST00000554600 M0QYT0 321 aa11.05□□□□□ -0.64
SHMT2-213ENST00000554600 SYNCRIPO60506 623 aaKnown RBP11.05□□□□□ -0.64
SHMT2-213ENST00000554600 RHOBTB1O94844 696 aa11.05□□□□□ -0.64
SHMT2-213ENST00000554600 CHRM1P11229 460 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-213ENST00000554600 PABPC1P11940 636 aaKnown RBP11.05□□□□□ -0.64
SHMT2-213ENST00000554600 POLR2EP19388 210 aaKnown RBP11.05□□□□□ -0.64
SHMT2-213ENST00000554600 TACR2P21452 398 aa11.05□□□□□ -0.64
SHMT2-213ENST00000554600 HLA-FP30511 346 aa11.05□□□□□ -0.64
SHMT2-213ENST00000554600 CCR1P32246 355 aa11.05□□□□□ -0.64
SHMT2-213ENST00000554600 CDH5P33151 784 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-213ENST00000554600 NOS2P35228 1153 aa11.05□□□□□ -0.64
SHMT2-213ENST00000554600 DHPSP49366 369 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-213ENST00000554600 SULT1E1P49888 294 aa11.05□□□□□ -0.64
SHMT2-213ENST00000554600 JAM2P57087 298 aa11.05□□□□□ -0.64
SHMT2-213ENST00000554600 NOMO3P69849 1222 aa11.05□□□□□ -0.64
SHMT2-213ENST00000554600 CACNA1BQ00975 2339 aa11.05□□□□□ -0.64
SHMT2-213ENST00000554600 CDR2Q01850 454 aa11.05□□□□□ -0.64
SHMT2-213ENST00000554600 CDH18Q13634 790 aa11.05□□□□□ -0.64
SHMT2-213ENST00000554600 BYSLQ13895 437 aaKnown RBP11.05□□□□□ -0.64
SHMT2-213ENST00000554600 ZNF234Q14588 700 aa11.05□□□□□ -0.64
SHMT2-213ENST00000554600 EIF4HQ15056 248 aaKnown RBP11.05□□□□□ -0.64
SHMT2-213ENST00000554600 CCDC6Q16204 474 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms