RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 STXBP5Q5T5C0 1151 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 CHSY1Q86X52 802 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 CPNE8Q86YQ8 564 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 ITFG1Q8TB96 612 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 ZSCAN18Q8TBC5 510 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-210ENST00000553950 ING5Q8WYH8 240 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 FGF13Q92913 245 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 OTUB2Q96DC9 234 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 TBC1D31Q96DN5 1066 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 GUCD1Q96NT3 240 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 APOL5Q9BWW9 433 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 TRPV4Q9HBA0 871 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 PCDH18Q9HCL0 1135 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 SMPD4Q9NXE4 827 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 STIM2Q9P246 746 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 TBC1D14Q9P2M4 693 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 STOML2Q9UJZ1 356 aa15.01□□□□□ -0.01
SHMT2-210ENST00000553950 GOLGA6L10A0A0M3HER8 536 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 LEFTY2O00292 366 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 EEF2KO00418 725 aaKnown RBP15□□□□□ -0.01
SHMT2-210ENST00000553950 ACSL4O60488 711 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 ZNF189O75820 626 aaPredicted RBP15□□□□□ -0.01
SHMT2-210ENST00000553950 URI1O94763 535 aaPredicted RBP15□□□□□ -0.01
SHMT2-210ENST00000553950 TJP3O95049 919 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 SERPINB6P35237 376 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 CHKAP35790 457 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 LTBRP36941 435 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 SEMA3BQ13214 749 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 DPYSL3Q14195 570 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 WHAMMP3Q1A5X7 153 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 PUS10Q3MIT2 529 aaKnown RBP15□□□□□ -0.01
SHMT2-210ENST00000553950 TXNRD3NBQ6F5E7 133 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 SPOCD1Q6ZMY3 1216 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 HTR3DQ70Z44 454 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 MTSS1LQ765P7 747 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 Q7L0L9 218 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 OTOP3Q7RTS5 596 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 ACTRT1Q8TDG2 376 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 SH3RF2Q8TEC5 729 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 SUSD6Q92537 303 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 SMARCD2Q92925 531 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 ACSF2Q96CM8 615 aaPredicted RBP15□□□□□ -0.01
SHMT2-210ENST00000553950 FAF2Q96CS3 445 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 SLC22A12Q96S37 553 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 PSMB7Q99436 277 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 MAK16Q9BXY0 300 aaKnown RBP15□□□□□ -0.01
SHMT2-210ENST00000553950 CATSPERBQ9H7T0 1116 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 KLHL11Q9NVR0 708 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 MTMR10Q9NXD2 777 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 CFAP97Q9P2B7 532 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 OR12D3Q9UGF7 316 aa15□□□□□ -0.01
SHMT2-210ENST00000553950 TTC7AQ9ULT0 858 aaPredicted RBP15□□□□□ -0.01
SHMT2-210ENST00000553950 DAPK3O43293 454 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 CEP104O60308 925 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 HOXC13P31276 330 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 CDKN2BP42772 138 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 ARSEP51690 589 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 DLX2Q07687 328 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-210ENST00000553950 ZNF77Q15935 545 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 TAZQ16635 292 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 RAB6CQ53S08 254 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 MS4A13Q5J8X5 152 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 ADGRF1Q5T601 910 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 DCAF12L1Q5VU92 463 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 Q6ZNB5 142 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 ARID3BQ8IVW6 561 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-210ENST00000553950 FAM217AQ8IXS0 508 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 RASGEF1CQ8N431 466 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 CPXM2Q8N436 756 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 ZNF557Q8N988 423 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-210ENST00000553950 TTC13Q8NBP0 860 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 MNS1Q8NEH6 495 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 USP13Q92995 863 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-210ENST00000553950 HLA-CQ95604 372 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 ASB16Q96NS5 453 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 KCTD15Q96SI1 283 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-210ENST00000553950 CYP2S1Q96SQ9 504 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 FRMD8P1Q9BZ68 369 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-210ENST00000553950 OSBPL8Q9BZF1 889 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 RAB6CQ9H0N0 254 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 GPATCH2LQ9NWQ4 482 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 PPARGC1AQ9UBK2 798 aaKnown RBP14.99□□□□□ -0.01
SHMT2-210ENST00000553950 CDC23Q9UJX2 597 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 USP15Q9Y4E8 981 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-210ENST00000553950 HS3ST4Q9Y661 456 aa14.99□□□□□ -0.01
SHMT2-210ENST00000553950 hCG_1818297A0A087WSY0 165 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-210ENST00000553950 E9PAM4 449 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 FANCGO15287 622 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 CREB3O43889 395 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 PRAMEF12O95522 483 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 CYBBP04839 570 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 PYGMP11217 842 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 TACR2P21452 398 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 TGM2P21980 687 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 KCNA5P22460 613 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 GBP2P32456 591 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-210ENST00000553950 KCNQ1P51787 676 aa14.98□□□□□ -0.01
SHMT2-210ENST00000553950 MLLT6P55198 1093 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-210ENST00000553950 PIK3R6Q5UE93 754 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms