RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 E2F5Q15329 346 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 ANGPT1Q15389 498 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 NFKBIBQ15653 356 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 C11orf91Q3C1V1 193 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 NUGGCQ68CJ6 796 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 PPP1R2P3Q6NXS1 205 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 ZC3H14Q6PJT7 736 aaKnown RBP8.69□□□□□ -1.02
PSEN1-209ENST00000553855 TRIM72Q6ZMU5 477 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 TPGS1Q6ZTW0 290 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 TMEM110Q86TL2 294 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 LUZP1Q86V48 1076 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 ATCAYQ86WG3 371 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 C1orf210Q8IVY1 113 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 BBS7Q8IWZ6 715 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 ZNF295-AS1Q8N0V1 137 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 C1orf131Q8NDD1 294 aaKnown RBP8.69□□□□□ -1.02
PSEN1-209ENST00000553855 SNIP1Q8TAD8 396 aaKnown RBP8.69□□□□□ -1.02
PSEN1-209ENST00000553855 NDRG1Q92597 394 aaKnown RBP8.69□□□□□ -1.02
PSEN1-209ENST00000553855 CLDN23Q96B33 292 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 C18orf8Q96DM3 657 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 IQCDQ96DY2 449 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 PNKPQ96T60 521 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 ZSWIM1Q9BR11 485 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 FUCA2Q9BTY2 467 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 NUP58Q9BVL2 599 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 BBS2Q9BXC9 721 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 NAA15Q9BXJ9 866 aaKnown RBP8.69□□□□□ -1.02
PSEN1-209ENST00000553855 ACP6Q9NPH0 428 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 SPHK2Q9NRA0 654 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 TMEM51Q9NW97 253 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 ASNSD1Q9NWL6 643 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 DEC1Q9P2X7 70 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 SIK3Q9Y2K2 1263 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 PTPRDP23468 1912 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 TECTAO75443 2155 aa8.69□□□□□ -1.02
PSEN1-209ENST00000553855 A0A1B0GTH6 734 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 TBC1D3BA6NDS4 549 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 NEDD8-MDP1E9PL57 170 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 MEN1O00255 615 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 HSF2BPO75031 334 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 STC2O76061 302 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 LATS1O95835 1130 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 SLC2A3P11169 496 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 CHRNB1P11230 501 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 NSFP46459 744 aaKnown RBP8.68□□□□□ -1.02
PSEN1-209ENST00000553855 CXCL12P48061 93 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 RPL34P49207 117 aaKnown RBP8.68□□□□□ -1.02
PSEN1-209ENST00000553855 PGFP49763 221 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 KLK7P49862 253 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 NRLP54845 237 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 ZXDBP98169 803 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 FANCCQ00597 558 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 CDR2Q01850 454 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 CSTF1Q05048 431 aaKnown RBP8.68□□□□□ -1.02
PSEN1-209ENST00000553855 MTA1Q13330 715 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 TRIP4Q15650 581 aaPredicted RBP8.68□□□□□ -1.02
PSEN1-209ENST00000553855 TMEM196Q5HYL7 178 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 LY6G5CQ5SRR4 150 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 GRAMD4Q6IC98 578 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 RHBDF2Q6PJF5 856 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 LRSAM1Q6UWE0 723 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 BEND5Q7L4P6 421 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 DENND1CQ8IV53 801 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 SPEM1Q8N4L4 309 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 ATP6V0D2Q8N8Y2 350 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 ZNF557Q8N988 423 aaPredicted RBP8.68□□□□□ -1.02
PSEN1-209ENST00000553855 RIN3Q8TB24 985 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 DDI1Q8WTU0 396 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 ACDQ96AP0 544 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 EDEM3Q9BZQ6 932 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 NUCKS1Q9H1E3 243 aaKnown RBP8.68□□□□□ -1.02
PSEN1-209ENST00000553855 CHRDQ9H2X0 955 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 FAM204AQ9H8W3 233 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 ARHGEF4Q9NR80 690 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 RRN3Q9NYV6 651 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 SFMBT1Q9UHJ3 866 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 AJAP1Q9UKB5 411 aaPredicted RBP8.68□□□□□ -1.02
PSEN1-209ENST00000553855 FBXO4Q9UKT5 387 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 STAP1Q9ULZ2 295 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 MYO6Q9UM54 1294 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 SLC8A2Q9UPR5 921 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 MTF2Q9Y483 593 aaPredicted RBP8.68□□□□□ -1.02
PSEN1-209ENST00000553855 PAXBP1Q9Y5B6 917 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 MYH10P35580 1976 aa8.68□□□□□ -1.02
PSEN1-209ENST00000553855 ANKRD62A6NC57 917 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 H0Y858 1186 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 TEX33O43247 280 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 HOXC11O43248 304 aaPredicted RBP8.67□□□□□ -1.02
PSEN1-209ENST00000553855 PAPSS1O43252 624 aaPredicted RBP8.67□□□□□ -1.02
PSEN1-209ENST00000553855 MMEP08473 750 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 TYRP14679 529 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 ABCB4P21439 1286 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 TNFAIP3P21580 790 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 MZF1P28698 734 aaPredicted RBP8.67□□□□□ -1.02
PSEN1-209ENST00000553855 GRIA2P42262 883 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 JAM2P57087 298 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 SLC6A3Q01959 620 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 RING1Q06587 406 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 ASIC2Q16515 512 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 MPPE1Q53F39 396 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms