RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 CDK16Q00536 496 aa14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 AP1B1Q10567 949 aa14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 SF3A3Q12874 501 aaKnown RBP eCLIP14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 MAPRE1Q15691 268 aaKnown RBP14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 SLC1A5Q15758 541 aa14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 ARL13BQ3SXY8 428 aa14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 LACTB2Q53H82 288 aaPredicted RBP14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 DENND5BQ6ZUT9 1274 aa14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 COLGALT1Q8NBJ5 622 aa14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 NETO2Q8NC67 525 aa14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 ALKBH8Q96BT7 664 aaKnown RBP14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 EBNA1BP2Q99848 306 aaKnown RBP14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 FERMT1Q9BQL6 677 aa14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 COLEC11Q9BWP8 271 aa14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 PRDM12Q9H4Q4 367 aa14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 USP15Q9Y4E8 981 aaPredicted RBP14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 IKBKGQ9Y6K9 419 aa14.46□□□□□ -0.09
RAB3IP-216ENST00000552199 NLRC5Q86WI3 1866 aa14.46□□□□□ -0.1
RAB3IP-216ENST00000552199 CENPFP49454 3210 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 MOXD2PA6NHM9 499 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 RNF103O00237 685 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 OPHN1O60890 802 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 ZWINTO95229 277 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 EOMESO95936 686 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 CPP00450 1065 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 MT-ND3P03897 115 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 AMHP03971 560 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 INHBAP08476 426 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 PRKCHP24723 683 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 CXCR3P49682 368 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 TPI1P60174 286 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 SARNPP82979 210 aaKnown RBP14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 FAAP100Q0VG06 881 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 BSPRYQ5W0U4 402 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 TRAF7Q6Q0C0 670 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 PDZD4Q76G19 769 aaPredicted RBP14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 CCNYQ8ND76 341 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 CD99L2Q8TCZ2 262 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 GLT1D1Q96MS3 346 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 TRPV6Q9H1D0 765 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 PCDHB8Q9UN66 801 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 RAD54BQ9Y620 910 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 PATJQ8NI35 1801 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 F8W810 466 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 TSPY1Q01534 308 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 WASHC5Q12768 1159 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 GLB1LQ6UWU2 654 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 UNC5AQ6ZN44 842 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 RGS9BPQ6ZS82 235 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 SLC26A11Q86WA9 606 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 REM2Q8IYK8 340 aaPredicted RBP14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 MICALL1Q8N3F8 863 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 MPP5Q8N3R9 675 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 BANPQ8N9N5 519 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 WDCPQ9H6R7 721 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 ACTR5Q9H9F9 607 aaPredicted RBP14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 EIF2B3Q9NR50 452 aaKnown RBP14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 GRID1Q9ULK0 1009 aa14.45□□□□□ -0.1
RAB3IP-216ENST00000552199 ZNF189O75820 626 aaPredicted RBP14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 APOEP02649 317 aa14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 MLNP12872 115 aa14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 GRIA1P42261 906 aa14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 ZNF135P52742 658 aaPredicted RBP14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 FAM189BP81408 668 aa14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 ACTN3Q08043 901 aaPredicted RBP14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 MBTPS1Q14703 1052 aa14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 MTFR1Q15390 333 aa14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 ZKSCAN8Q15776 578 aaPredicted RBP14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 PDK4Q16654 411 aa14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 PARP6Q2NL67 630 aa14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 HHATQ5VTY9 493 aa14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 SLC24A5Q71RS6 500 aa14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 BEND5Q7L4P6 421 aa14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 SPATA21Q7Z572 469 aa14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 TAC4Q86UU9 113 aa14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 LRRC6Q86X45 466 aa14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 TP53INP2Q8IXH6 220 aa14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 PPM1NQ8N819 430 aa14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 GRAMD1AQ96CP6 724 aa14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 TSEN34Q9BSV6 310 aaKnown RBP14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 SEPT10Q9P0V9 454 aa14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 ZNF180Q9UJW8 692 aa14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 MAD1L1Q9Y6D9 718 aa14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 MYO18AQ92614 2054 aaKnown RBP14.44□□□□□ -0.1
RAB3IP-216ENST00000552199 CXorf49A8MYA2 514 aaPredicted RBP14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 DNM1LO00429 736 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 KIF3CO14782 793 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 B4GALT3O60512 393 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 DDHD2O94830 711 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 SUN1O94901 812 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 TTC39BQ5VTQ0 682 aaPredicted RBP14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 CGB2Q6NT52 195 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 LRRC8BQ6P9F7 803 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 LVRNQ6Q4G3 990 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 ZNF280BQ86YH2 543 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 CTAGE3PQ8IX95 158 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 ZNF567Q8N184 647 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 SLC43A3Q8NBI5 491 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 RAET1EQ8TD07 263 aa14.43□□□□□ -0.1
RAB3IP-216ENST00000552199 LINC01599Q8WXQ3 324 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms