RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, human

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCN1-206	ENST00000549815	WFIKKN2	Q8TEU8	576 aa		13.98	□□□□□ -0.17
GCN1-206	ENST00000549815	ZNF606	Q8WXB4	792 aa		13.98	□□□□□ -0.17
GCN1-206	ENST00000549815	MYEOV	Q96EZ4	313 aa		13.98	□□□□□ -0.17
GCN1-206	ENST00000549815	SLC39A13	Q96H72	371 aa		13.98	□□□□□ -0.17
GCN1-206	ENST00000549815	FCRL2	Q96LA5	508 aa	Predicted RBP	13.98	□□□□□ -0.17
GCN1-206	ENST00000549815	HSPA12B	Q96MM6	686 aa		13.98	□□□□□ -0.17
GCN1-206	ENST00000549815	CIPC	Q9C0C6	399 aa		13.98	□□□□□ -0.17
GCN1-206	ENST00000549815	MIS12	Q9H081	205 aa		13.98	□□□□□ -0.17
GCN1-206	ENST00000549815	TMEM245	Q9H330	911 aa		13.98	□□□□□ -0.17
GCN1-206	ENST00000549815	UBE2T	Q9NPD8	197 aa	Predicted RBP	13.98	□□□□□ -0.17
GCN1-206	ENST00000549815	ACP6	Q9NPH0	428 aa		13.98	□□□□□ -0.17
GCN1-206	ENST00000549815	ANGPTL2	Q9UKU9	493 aa		13.98	□□□□□ -0.17
GCN1-206	ENST00000549815	NAALADL1	Q9UQQ1	740 aa		13.98	□□□□□ -0.17
GCN1-206	ENST00000549815	CACNA1E	Q15878	2313 aa		13.98	□□□□□ -0.17
GCN1-206	ENST00000549815	ZFHX4	Q86UP3	3567 aa		13.98	□□□□□ -0.17
GCN1-206	ENST00000549815	BECN2	A8MW95	431 aa		13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	FGFR1OP	O95684	399 aa	Known RBP	13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	PABPC1	P11940	636 aa	Known RBP	13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	KRT5	P13647	590 aa		13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	SLC9A1	P19634	815 aa		13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	CD70	P32970	193 aa		13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	MAPK8	P45983	427 aa		13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	NNT	Q13423	1086 aa		13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	CAMK2G	Q13555	558 aa	Predicted RBP	13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	CAMK4	Q16566	473 aa		13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	RFWD3	Q6PCD5	774 aa		13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	GJB7	Q6PEY0	223 aa		13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	CHST9	Q7L1S5	443 aa		13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	TMEM110	Q86TL2	294 aa		13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	TMPRSS6	Q8IU80	811 aa		13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	UNC45B	Q8IWX7	931 aa		13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	AHI1	Q8N157	1196 aa		13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	STK32A	Q8WU08	396 aa		13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	SIPA1	Q96FS4	1042 aa		13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	TOE1	Q96GM8	510 aa	Known RBP	13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	ABCB8	Q9NUT2	735 aa		13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	GGA2	Q9UJY4	613 aa		13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	WASF3	Q9UPY6	502 aa		13.97	□□□□□ -0.17
GCN1-206	ENST00000549815	CEP295	Q9C0D2	2601 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	FRY	Q5TBA9	3013 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	PCNX2	A6NKB5	2137 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	CACNA1B	Q00975	2339 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	WDFY3	Q8IZQ1	3526 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	UPK3BL1	B0FP48	263 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	UPK3BL2	E5RIL1	263 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	IRAK2	O43187	625 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	PAPSS1	O43252	624 aa	Predicted RBP	13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	SYNCRIP	O60506	623 aa	Known RBP	13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	IGLV3-25	P01717	112 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	CFI	P05156	583 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	EPHX1	P07099	455 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	CEACAM1	P13688	526 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	HLA-E	P13747	358 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	ACADSB	P45954	432 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	TPMT	P51580	245 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	APBA1	Q02410	837 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	ZNF252P-AS1	Q0IIN9	211 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	SEMA3B	Q13214	749 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	UAP1L1	Q3KQV9	507 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	SYPL2	Q5VXT5	272 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	MBLAC2	Q68D91	279 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	SERPINA13P	Q6UXR4	307 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	ENOSF1	Q7L5Y1	443 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	RABEPK	Q7Z6M1	372 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	PIP4P1	Q86T03	277 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	TAC4	Q86UU9	113 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	WDTC1	Q8N5D0	677 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	OR2T3	Q8NH03	318 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	CYB5D2	Q8WUJ1	264 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	DNASE2B	Q8WZ79	361 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	PRCC	Q92733	491 aa	Predicted RBP	13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	GOLGA1	Q92805	767 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	FOXJ1	Q92949	421 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	SERPINB11	Q96P15	392 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	CRACR2A	Q9BSW2	395 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	TLR6	Q9Y2C9	796 aa		13.96	□□□□□ -0.17
GCN1-206	ENST00000549815	USP24	Q9UPU5	2620 aa		13.95	□□□□□ -0.18
GCN1-206	ENST00000549815	GTPBP10	A4D1E9	387 aa	Known RBP	13.95	□□□□□ -0.18
GCN1-206	ENST00000549815		E5RJQ4	531 aa		13.95	□□□□□ -0.18
GCN1-206	ENST00000549815	ARHGAP33	O14559	1287 aa		13.95	□□□□□ -0.18
GCN1-206	ENST00000549815	SART1	O43290	800 aa	Known RBP	13.95	□□□□□ -0.18
GCN1-206	ENST00000549815	TBL1X	O60907	577 aa		13.95	□□□□□ -0.18
GCN1-206	ENST00000549815	NDUFS2	O75306	463 aa		13.95	□□□□□ -0.18
GCN1-206	ENST00000549815	LETM1	O95202	739 aa	Predicted RBP	13.95	□□□□□ -0.18
GCN1-206	ENST00000549815	MAOB	P27338	520 aa		13.95	□□□□□ -0.18
GCN1-206	ENST00000549815	OXTR	P30559	389 aa		13.95	□□□□□ -0.18
GCN1-206	ENST00000549815	GNA15	P30679	374 aa		13.95	□□□□□ -0.18
GCN1-206	ENST00000549815	SLC11A2	P49281	568 aa		13.95	□□□□□ -0.18
GCN1-206	ENST00000549815	GFPT1	Q06210	699 aa	Predicted RBP	13.95	□□□□□ -0.18
GCN1-206	ENST00000549815	DEFB124	Q8NES8	71 aa		13.95	□□□□□ -0.18
GCN1-206	ENST00000549815	CADM4	Q8NFZ8	388 aa		13.95	□□□□□ -0.18
GCN1-206	ENST00000549815	ADAM32	Q8TC27	787 aa		13.95	□□□□□ -0.18
GCN1-206	ENST00000549815	SHC3	Q92529	594 aa		13.95	□□□□□ -0.18
GCN1-206	ENST00000549815	MYO19	Q96H55	970 aa		13.95	□□□□□ -0.18
GCN1-206	ENST00000549815	GPR174	Q9BXC1	333 aa		13.95	□□□□□ -0.18
GCN1-206	ENST00000549815	NUCKS1	Q9H1E3	243 aa	Known RBP	13.95	□□□□□ -0.18
GCN1-206	ENST00000549815	ST7	Q9NRC1	585 aa		13.95	□□□□□ -0.18
GCN1-206	ENST00000549815	APEX2	Q9UBZ4	518 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms