RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 PRDM12Q9H4Q4 367 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 PCDHB5Q9Y5E4 795 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 TEX264Q9Y6I9 313 aa19.75■□□□□ 0.75
BRF1-215ENST00000549655 NDUFAB1O14561 156 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 PPP1R12AO14974 1030 aaPredicted RBP19.74■□□□□ 0.75
BRF1-215ENST00000549655 HOXA2O43364 376 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 TSHRP16473 764 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 GLUD2P49448 558 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 GPR15P49685 360 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 CBLBQ13191 982 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 EIF4EBP2Q13542 120 aaPredicted RBP19.74■□□□□ 0.75
BRF1-215ENST00000549655 ANKRD20A2Q5SQ80 823 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 ANKRD20A1Q5TYW2 823 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 ANKRD20A3Q5VUR7 823 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 PDZD4Q76G19 769 aaPredicted RBP19.74■□□□□ 0.75
BRF1-215ENST00000549655 TADA2BQ86TJ2 420 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 TP53INP2Q8IXH6 220 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 STKLD1Q8NE28 680 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 MAML1Q92585 1016 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 XPO6Q96QU8 1125 aaKnown RBP19.74■□□□□ 0.75
BRF1-215ENST00000549655 EPAS1Q99814 870 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 PPCSQ9HAB8 311 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 TBKBP1A7MCY6 615 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 TRIM66O15016 1216 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 IRAK2O43187 625 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 ATP2A2P16615 1042 aaKnown RBP19.74■□□□□ 0.75
BRF1-215ENST00000549655 FGFR3P22607 806 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 ZNF135P52742 658 aaPredicted RBP19.74■□□□□ 0.75
BRF1-215ENST00000549655 ZNF280DQ6N043 979 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 DENND5BQ6ZUT9 1274 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 CAND1Q86VP6 1230 aaKnown RBP19.74■□□□□ 0.75
BRF1-215ENST00000549655 SRRM1Q8IYB3 904 aaKnown RBP19.74■□□□□ 0.75
BRF1-215ENST00000549655 AGGF1Q8N302 714 aaeCLIP19.74■□□□□ 0.75
BRF1-215ENST00000549655 MCUQ8NE86 351 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 FBF1Q8TES7 1133 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 C8orf48Q96LL4 319 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 FERMT1Q9BQL6 677 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 PPP1R12CQ9BZL4 782 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 INTS9Q9NV88 658 aaKnown RBP19.74■□□□□ 0.75
BRF1-215ENST00000549655 SFMBT1Q9UHJ3 866 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 SLC24A2Q9UI40 661 aa19.74■□□□□ 0.75
BRF1-215ENST00000549655 A0A1W2PQH9 124 aa19.73■□□□□ 0.75
BRF1-215ENST00000549655 GMNCA6NCL1 334 aa19.73■□□□□ 0.75
BRF1-215ENST00000549655 OR6C75A6NL08 312 aa19.73■□□□□ 0.75
BRF1-215ENST00000549655 RNF103O00237 685 aa19.73■□□□□ 0.75
BRF1-215ENST00000549655 STK10O94804 968 aaKnown RBP19.73■□□□□ 0.75
BRF1-215ENST00000549655 LRIG2O94898 1065 aa19.73■□□□□ 0.75
BRF1-215ENST00000549655 GEMIN4P57678 1058 aaKnown RBP19.73■□□□□ 0.75
BRF1-215ENST00000549655 FUT10Q6P4F1 479 aa19.73■□□□□ 0.75
BRF1-215ENST00000549655 SLC39A5Q6ZMH5 540 aa19.73■□□□□ 0.75
BRF1-215ENST00000549655 ANKRD33Q7Z3H0 272 aa19.73■□□□□ 0.75
BRF1-215ENST00000549655 NLRP14Q86W24 1093 aa19.73■□□□□ 0.75
BRF1-215ENST00000549655 NUP93Q8N1F7 819 aa19.73■□□□□ 0.75
BRF1-215ENST00000549655 ATAD1Q8NBU5 361 aa19.73■□□□□ 0.75
BRF1-215ENST00000549655 ATXN2LQ8WWM7 1075 aaKnown RBP19.73■□□□□ 0.75
BRF1-215ENST00000549655 MRRFQ96E11 262 aaKnown RBP19.73■□□□□ 0.75
BRF1-215ENST00000549655 CCT8L2Q96SF2 557 aa19.73■□□□□ 0.75
BRF1-215ENST00000549655 MRPL9Q9BYD2 267 aaKnown RBP19.73■□□□□ 0.75
BRF1-215ENST00000549655 SMOC2Q9H3U7 446 aa19.73■□□□□ 0.75
BRF1-215ENST00000549655 ACSS3Q9H6R3 686 aa19.73■□□□□ 0.75
BRF1-215ENST00000549655 NMUR1Q9HB89 426 aa19.73■□□□□ 0.75
BRF1-215ENST00000549655 TMEM120BA0PK00 339 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 NT5C1B-RDH14C9J2C7 533 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 CXCL10P02778 98 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 TPSB2P20231 275 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 EPHB2P29323 1055 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 PBX3P40426 434 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 CCT5P48643 541 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 SEMA5AQ13591 1074 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 EFTUD2Q15029 972 aaKnown RBP eCLIP19.72■□□□□ 0.752e-6■■■■■ 62.8
BRF1-215ENST00000549655 TPSAB1Q15661 275 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 DEFB128Q7Z7B8 93 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 TTC9BQ8N6N2 239 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 NPWQ8N729 165 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 CASP10Q92851 521 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 BEGAINQ9BUH8 593 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 OSBPL2Q9H1P3 480 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 ARHGEF38Q9NXL2 777 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 SEPT10Q9P0V9 454 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 SCML2Q9UQR0 700 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 RAD54BQ9Y620 910 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 MYO16Q9Y6X6 1858 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 MYO18AQ92614 2054 aaKnown RBP19.72■□□□□ 0.75
BRF1-215ENST00000549655 RASA4BC9J798 803 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 MSI1O43347 362 aaKnown RBP19.72■□□□□ 0.75
BRF1-215ENST00000549655 RASA4O43374 803 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 OPHN1O60890 802 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 GALTP07902 379 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 BRAFP15056 766 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 FDFT1P37268 417 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 MAGEA11P43364 429 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 ARPP19P56211 112 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 FAAP100Q0VG06 881 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 NR1H3Q13133 447 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 BRMS1LQ5PSV4 323 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 COLGALT1Q8NBJ5 622 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 FBXO44Q9H4M3 255 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 KCNK9Q9NPC2 374 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 FETUBQ9UGM5 382 aa19.72■□□□□ 0.75
BRF1-215ENST00000549655 NUDT5Q9UKK9 219 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms