RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 PEX1O43933 1283 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 GLRA3O75311 464 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 PRKCGP05129 697 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 RGS2P41220 211 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 MTTPP55157 894 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 DBN1Q16643 649 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 METTL25Q8N6Q8 603 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 LENG1Q96BZ8 264 aaPredicted RBP14.13□□□□□ -0.15
HDAC7-228ENST00000548938 DGCR14Q96DF8 476 aaKnown RBP14.13□□□□□ -0.15
HDAC7-228ENST00000548938 KLRG1Q96E93 195 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 MRPL4Q9BYD3 311 aaKnown RBP14.13□□□□□ -0.15
HDAC7-228ENST00000548938 MAN1C1Q9NR34 630 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 GALNT8Q9NY28 637 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 PTTG2Q9NZH5 202 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 HSFX1Q9UBD0 423 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 G3BP2Q9UN86 482 aaKnown RBP14.13□□□□□ -0.15
HDAC7-228ENST00000548938 SPATA31C2B4DYI2 1134 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 CD1EP15812 388 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 TGM2P21980 687 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 MYBPC3Q14896 1274 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 CDR2LQ86X02 465 aaPredicted RBP14.13□□□□□ -0.15
HDAC7-228ENST00000548938 PIP4K2CQ8TBX8 421 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 PRPF31Q8WWY3 499 aaKnown RBP14.13□□□□□ -0.15
HDAC7-228ENST00000548938 NLRP4Q96MN2 994 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 OXCT2Q9BYC2 517 aaPredicted RBP14.13□□□□□ -0.15
HDAC7-228ENST00000548938 PCDH18Q9HCL0 1135 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 XPNPEP3Q9NQH7 507 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 PIH1D1Q9NWS0 290 aaKnown RBP14.13□□□□□ -0.15
HDAC7-228ENST00000548938 MOCS1Q9NZB8 636 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 NDUFA13Q9P0J0 144 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 BTBD7Q9P203 1132 aa14.13□□□□□ -0.15
HDAC7-228ENST00000548938 MYOCOSA0A1B0GUC4 107 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 WDR27A2RRH5 827 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 E9PBE3 544 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 KLHL41O60662 606 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 TNNC2P02585 160 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 COX4I1P13073 169 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 GPD2P43304 727 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 RPL26P61254 145 aaKnown RBP14.12□□□□□ -0.15
HDAC7-228ENST00000548938 NADK2Q4G0N4 442 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 PPM1JQ5JR12 505 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 DLK2Q6UY11 383 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 ILDR2Q71H61 639 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 MAP7D3Q8IWC1 876 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 PQLC1Q8N2U9 271 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 MARVELD2Q8N4S9 558 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 CDHR1Q96JP9 859 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 ACO2Q99798 780 aaKnown RBP14.12□□□□□ -0.15
HDAC7-228ENST00000548938 RNPEPQ9H4A4 650 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 NGRNQ9NPE2 291 aaKnown RBP14.12□□□□□ -0.15
HDAC7-228ENST00000548938 NR2E3Q9Y5X4 410 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 PSAT1Q9Y617 370 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 SSC5DA1L4H1 1573 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 CCDC160A6NGH7 325 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 DNAJA2O60884 412 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 CLPTM1O96005 669 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 ALOX15P16050 662 aaPredicted RBP14.12□□□□□ -0.15
HDAC7-228ENST00000548938 RPL5P46777 297 aaKnown RBP14.12□□□□□ -0.15
HDAC7-228ENST00000548938 DEUP1Q05D60 604 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 ITGA9Q13797 1035 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 GK3PQ14409 553 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 ZNF667Q5HYK9 610 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 STXBP5Q5T5C0 1151 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 OR6B2Q6IFH4 312 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 CASC4Q6P4E1 433 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 KLHDC10Q6PID8 442 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 PACS1Q6VY07 963 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 FAM183BPQ6ZVS7 135 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 BCO2Q9BYV7 579 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 GRIP2Q9C0E4 1043 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 SIX4Q9UIU6 781 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 ARHGAP26Q9UNA1 814 aa14.12□□□□□ -0.15
HDAC7-228ENST00000548938 hCG_2014768A0A024R1R8 64 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 SRGAP2CP0DJJ0 459 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 MYL4P12829 197 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 ATP6V1B1P15313 513 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 CNTFP26441 200 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 HMGCS2P54868 508 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 GBE1Q04446 702 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 PPP6R3Q5H9R7 873 aaPredicted RBP14.11□□□□□ -0.15
HDAC7-228ENST00000548938 SLC9A4Q6AI14 798 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 ANKRD36BP1Q96IX9 119 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 AS3MTQ9HBK9 375 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 ZNF358Q9NW07 568 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 TMEM216Q9P0N5 145 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 PSMD13Q9UNM6 376 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 LZTS1Q9Y250 596 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 TMCC1O94876 653 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 PRKCBP05771 671 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 TPSB2P20231 275 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 ABCE1P61221 599 aaKnown RBP14.11□□□□□ -0.15
HDAC7-228ENST00000548938 NIPAL4Q0D2K0 466 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 TPSAB1Q15661 275 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 CNGA3Q16281 694 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 B3GNT6Q6ZMB0 384 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 ACMSDQ8TDX5 336 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 ZNF668Q96K58 619 aaPredicted RBP14.11□□□□□ -0.15
HDAC7-228ENST00000548938 KCNK16Q96T55 309 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 SNRNP25Q9BV90 132 aaKnown RBP14.11□□□□□ -0.15
HDAC7-228ENST00000548938 DDX18Q9NVP1 670 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms