RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 NAGPAQ9UK23 515 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 CFAP45Q9UL16 551 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 SCML2Q9UQR0 700 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 SSUH2Q9Y2M2 353 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 PCDHA5Q9Y5H7 936 aa8.9□□□□□ -0.98
TROAP-208ENST00000548817 SPTBN1Q01082 2364 aaKnown RBP8.9□□□□□ -0.99
TROAP-208ENST00000548817 A0A1B0GTQ1 180 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 A0A1W2PQH9 124 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 H0Y8X5 98 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 PDXKO00764 312 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 IKBKBO14920 756 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 TRIM24O15164 1050 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 VNN1O95497 513 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 NR3C1P04150 777 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 SLFN14P0C7P3 912 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 ACADMP11310 421 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 KRT13P13646 458 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 GLDCP23378 1020 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 CHKAP35790 457 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 CTSKP43235 329 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 TPMTP51580 245 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 SLC8A3P57103 927 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 CLDN10P78369 228 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 COG7P83436 770 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 EHHADHQ08426 723 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 UBAP2LQ14157 1087 aaKnown RBP8.89□□□□□ -0.99
TROAP-208ENST00000548817 RESP18Q5W5W9 173 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 KLHDC10Q6PID8 442 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 C12orf29Q8N999 325 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 TSC1Q92574 1164 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 BHMTQ93088 406 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 WBP2Q969T9 261 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 CNDP2Q96KP4 475 aaKnown RBP8.89□□□□□ -0.99
TROAP-208ENST00000548817 ACOX2Q99424 681 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 SDCBP2Q9H190 292 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 CYP3A43Q9HB55 503 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 CSNK1G1Q9HCP0 422 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 CYLDQ9NQC7 956 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 MARK1Q9P0L2 795 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 STRIP2Q9ULQ0 834 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 PCDHA7Q9UN72 937 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 CLCA2Q9UQC9 943 aa8.89□□□□□ -0.99
TROAP-208ENST00000548817 PRRT4C9JH25 899 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 K7ENP7 123 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 CYP26A1O43174 497 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 BEST1O76090 585 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 ASS1P00966 412 aaKnown RBP8.88□□□□□ -0.99
TROAP-208ENST00000548817 HLA-DRAP01903 254 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 ZSCAN22P10073 491 aaPredicted RBP8.88□□□□□ -0.99
TROAP-208ENST00000548817 RPL13P26373 211 aaKnown RBP8.88□□□□□ -0.99
TROAP-208ENST00000548817 CCR10P46092 362 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 NFATC3Q12968 1075 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 STK4Q13043 487 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 ZACNQ401N2 412 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 FUT11Q495W5 492 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 INO80CQ6PI98 192 aaPredicted RBP8.88□□□□□ -0.99
TROAP-208ENST00000548817 CLEC20AQ6ZU45 233 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 SV2AQ7L0J3 742 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 RSRC2Q7L4I2 434 aaKnown RBP8.88□□□□□ -0.99
TROAP-208ENST00000548817 GRAMD1CQ8IYS0 662 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 ARHGAP18Q8N392 663 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 TTC39CQ8N584 583 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 ZMIZ2Q8NF64 920 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 PLEKHO2Q8TD55 490 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 PRCCQ92733 491 aaPredicted RBP8.88□□□□□ -0.99
TROAP-208ENST00000548817 ELMO3Q96BJ8 720 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 SIPA1Q96FS4 1042 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 HEXIM2Q96MH2 286 aaKnown RBP8.88□□□□□ -0.99
TROAP-208ENST00000548817 TRIM4Q9C037 500 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 GZF1Q9H116 711 aaPredicted RBP8.88□□□□□ -0.99
TROAP-208ENST00000548817 SLC6A17Q9H1V8 727 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 TM9SF3Q9HD45 589 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 PNPLA8Q9NP80 782 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.88□□□□□ -0.99
TROAP-208ENST00000548817 DMAC2Q9NW81 257 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 PLK2Q9NYY3 685 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 USP25Q9UHP3 1055 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 SERTAD1Q9UHV2 236 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 RASAL2Q9UJF2 1139 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 NUDT5Q9UKK9 219 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.88□□□□□ -0.99
TROAP-208ENST00000548817 RAD54BQ9Y620 910 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 STON1Q9Y6Q2 735 aa8.88□□□□□ -0.99
TROAP-208ENST00000548817 KCNJ18B7U540 433 aa8.87□□□□□ -0.99
TROAP-208ENST00000548817 MDM4O15151 490 aa8.87□□□□□ -0.99
TROAP-208ENST00000548817 MAPK13O15264 365 aa8.87□□□□□ -0.99
TROAP-208ENST00000548817 KLK10O43240 276 aa8.87□□□□□ -0.99
TROAP-208ENST00000548817 TIMM44O43615 452 aa8.87□□□□□ -0.99
TROAP-208ENST00000548817 MYL1P05976 194 aa8.87□□□□□ -0.99
TROAP-208ENST00000548817 HMBSP08397 361 aa8.87□□□□□ -0.99
TROAP-208ENST00000548817 CISD3P0C7P0 127 aa8.87□□□□□ -0.99
TROAP-208ENST00000548817 C7P10643 843 aa8.87□□□□□ -0.99
TROAP-208ENST00000548817 SFTPCP11686 197 aa8.87□□□□□ -0.99
TROAP-208ENST00000548817 CD58P19256 250 aa8.87□□□□□ -0.99
TROAP-208ENST00000548817 CR2P20023 1033 aa8.87□□□□□ -0.99
TROAP-208ENST00000548817 CD27P26842 260 aa8.87□□□□□ -0.99
TROAP-208ENST00000548817 ASPAP45381 313 aa8.87□□□□□ -0.99
TROAP-208ENST00000548817 PGFP49763 221 aa8.87□□□□□ -0.99
TROAP-208ENST00000548817 VAMP7P51809 220 aa8.87□□□□□ -0.99
TROAP-208ENST00000548817 KIF11P52732 1056 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms