RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 GPD1P21695 349 aa15.01□□□□□ -0.01
DDX54-203ENST00000546869 RDXP35241 583 aaKnown RBP15.01□□□□□ -0.01
DDX54-203ENST00000546869 GRIA2P42262 883 aa15.01□□□□□ -0.01
DDX54-203ENST00000546869 NME3Q13232 169 aa15.01□□□□□ -0.01
DDX54-203ENST00000546869 MS4A13Q5J8X5 152 aa15.01□□□□□ -0.01
DDX54-203ENST00000546869 CCDC122Q5T0U0 273 aa15.01□□□□□ -0.01
DDX54-203ENST00000546869 NUDT18Q6ZVK8 323 aa15.01□□□□□ -0.01
DDX54-203ENST00000546869 ZNF557Q8N988 423 aaPredicted RBP15.01□□□□□ -0.01
DDX54-203ENST00000546869 KCNV2Q8TDN2 545 aa15.01□□□□□ -0.01
DDX54-203ENST00000546869 RNF34Q969K3 372 aa15.01□□□□□ -0.01
DDX54-203ENST00000546869 CCDC42Q96M95 316 aa15.01□□□□□ -0.01
DDX54-203ENST00000546869 PANX2Q96RD6 677 aa15.01□□□□□ -0.01
DDX54-203ENST00000546869 CHP1Q99653 195 aa15.01□□□□□ -0.01
DDX54-203ENST00000546869 PRRX2Q99811 253 aa15.01□□□□□ -0.01
DDX54-203ENST00000546869 PRMT1Q99873 361 aaKnown RBP15.01□□□□□ -0.01
DDX54-203ENST00000546869 KCNH6Q9H252 994 aa15.01□□□□□ -0.01
DDX54-203ENST00000546869 NHEJ1Q9H9Q4 299 aaPredicted RBP15.01□□□□□ -0.01
DDX54-203ENST00000546869 LMAN1LQ9HAT1 526 aa15.01□□□□□ -0.01
DDX54-203ENST00000546869 DEC1Q9P2X7 70 aa15.01□□□□□ -0.01
DDX54-203ENST00000546869 CNOT8Q9UFF9 292 aaKnown RBP15.01□□□□□ -0.01
DDX54-203ENST00000546869 NDRG2Q9UN36 371 aaKnown RBP15.01□□□□□ -0.01
DDX54-203ENST00000546869 FAM170AA1A519 330 aa15□□□□□ -0.01
DDX54-203ENST00000546869 ADCY5O95622 1261 aa15□□□□□ -0.01
DDX54-203ENST00000546869 FECHP22830 423 aa15□□□□□ -0.01
DDX54-203ENST00000546869 SLC6A4P31645 630 aa15□□□□□ -0.01
DDX54-203ENST00000546869 TNFRSF4P43489 277 aa15□□□□□ -0.01
DDX54-203ENST00000546869 SLC6A11P48066 632 aa15□□□□□ -0.01
DDX54-203ENST00000546869 RPL7AP62424 266 aaKnown RBP15□□□□□ -0.01
DDX54-203ENST00000546869 C5orf22Q49AR2 442 aa15□□□□□ -0.01
DDX54-203ENST00000546869 DCUN1D2Q6PH85 259 aa15□□□□□ -0.01
DDX54-203ENST00000546869 PHLDB2Q86SQ0 1253 aa15□□□□□ -0.01
DDX54-203ENST00000546869 C12orf40Q86WS4 652 aa15□□□□□ -0.01
DDX54-203ENST00000546869 DDI1Q8WTU0 396 aa15□□□□□ -0.01
DDX54-203ENST00000546869 ZNF653Q96CK0 615 aa15□□□□□ -0.01
DDX54-203ENST00000546869 P2RY11Q96G91 374 aa15□□□□□ -0.01
DDX54-203ENST00000546869 MCEEQ96PE7 176 aa15□□□□□ -0.01
DDX54-203ENST00000546869 HAPLN3Q96S86 360 aa15□□□□□ -0.01
DDX54-203ENST00000546869 CNPY3Q9BT09 278 aa15□□□□□ -0.01
DDX54-203ENST00000546869 CHRDQ9H2X0 955 aa15□□□□□ -0.01
DDX54-203ENST00000546869 SYNJ2BP-COX16A0A087WUM0 186 aa14.99□□□□□ -0.01
DDX54-203ENST00000546869 GOLGA6L7A0A1B0GV03 622 aa14.99□□□□□ -0.01
DDX54-203ENST00000546869 CHURC1-FNTBB4DL54 471 aa14.99□□□□□ -0.01
DDX54-203ENST00000546869 AKR1B10O60218 316 aa14.99□□□□□ -0.01
DDX54-203ENST00000546869 KAT7O95251 611 aa14.99□□□□□ -0.01
DDX54-203ENST00000546869 GJB6O95452 261 aa14.99□□□□□ -0.01
DDX54-203ENST00000546869 APODP05090 189 aa14.99□□□□□ -0.01
DDX54-203ENST00000546869 CYP1A2P05177 515 aa14.99□□□□□ -0.01
DDX54-203ENST00000546869 DESP17661 470 aa14.99□□□□□ -0.01
DDX54-203ENST00000546869 TACR2P21452 398 aa14.99□□□□□ -0.01
DDX54-203ENST00000546869 HOXD9P28356 352 aaPredicted RBP14.99□□□□□ -0.01
DDX54-203ENST00000546869 VCPP55072 806 aaKnown RBP14.99□□□□□ -0.01
DDX54-203ENST00000546869 GFPT1Q06210 699 aaPredicted RBP14.99□□□□□ -0.01
DDX54-203ENST00000546869 ACAP1Q15027 740 aa14.99□□□□□ -0.01
DDX54-203ENST00000546869 C10orf76Q5T2E6 689 aa14.99□□□□□ -0.01
DDX54-203ENST00000546869 CCDC170Q8IYT3 715 aa14.99□□□□□ -0.01
DDX54-203ENST00000546869 HJURPQ8NCD3 748 aaPredicted RBP14.99□□□□□ -0.01
DDX54-203ENST00000546869 EZH1Q92800 747 aaPredicted RBP14.99□□□□□ -0.01
DDX54-203ENST00000546869 NTAN1Q96AB6 310 aa14.99□□□□□ -0.01
DDX54-203ENST00000546869 NCAPGQ9BPX3 1015 aa14.99□□□□□ -0.01
DDX54-203ENST00000546869 TKTL2Q9H0I9 626 aa14.99□□□□□ -0.01
DDX54-203ENST00000546869 DEF6Q9H4E7 631 aa14.99□□□□□ -0.01
DDX54-203ENST00000546869 COX16Q9P0S2 106 aa14.99□□□□□ -0.01
DDX54-203ENST00000546869 XPO7Q9UIA9 1087 aaKnown RBP14.99□□□□□ -0.01
DDX54-203ENST00000546869 STARD13Q9Y3M8 1113 aa14.99□□□□□ -0.01
DDX54-203ENST00000546869 COL4A3Q01955 1670 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 TYW5A2RUC4 315 aaKnown RBP14.98□□□□□ -0.01
DDX54-203ENST00000546869 K7EQS6 105 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 ATG13O75143 517 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 PAGE1O75459 146 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 MOCS2O96007 188 aaPredicted RBP14.98□□□□□ -0.01
DDX54-203ENST00000546869 EGFP01133 1207 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 DCNP07585 359 aaKnown RBP14.98□□□□□ -0.01
DDX54-203ENST00000546869 ADRA1BP35368 520 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 DGKGP49619 791 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 GALCP54803 685 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 AIF1P55008 147 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 HDAC4P56524 1084 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 ATP11AP98196 1134 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 NRG1Q02297 640 aaPredicted RBP14.98□□□□□ -0.01
DDX54-203ENST00000546869 C15orf59Q2T9L4 293 aaPredicted RBP14.98□□□□□ -0.01
DDX54-203ENST00000546869 ARL13BQ3SXY8 428 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 HSF5Q4G112 596 aaPredicted RBP14.98□□□□□ -0.01
DDX54-203ENST00000546869 TTC39BQ5VTQ0 682 aaPredicted RBP14.98□□□□□ -0.01
DDX54-203ENST00000546869 NAIF1Q69YI7 327 aaPredicted RBP14.98□□□□□ -0.01
DDX54-203ENST00000546869 GRAMD4Q6IC98 578 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 RFWD3Q6PCD5 774 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 KIAA0907Q7Z7F0 614 aaPredicted RBP14.98□□□□□ -0.01
DDX54-203ENST00000546869 SPEM1Q8N4L4 309 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.98□□□□□ -0.01
DDX54-203ENST00000546869 NAT16Q8N8M0 369 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 TERB1Q8NA31 727 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 DTWD2Q8NBA8 298 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 FAM172AQ8WUF8 416 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 THAP2Q9H0W7 228 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 OSBPL2Q9H1P3 480 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 RETREG1Q9H6L5 497 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 ARHGEF4Q9NR80 690 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 DNAJC17Q9NVM6 304 aaKnown RBP14.98□□□□□ -0.01
DDX54-203ENST00000546869 INTUQ9ULD6 942 aa14.98□□□□□ -0.01
DDX54-203ENST00000546869 HS3ST4Q9Y661 456 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms