RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 RPS9P46781 194 aaKnown RBP17.44■□□□□ 0.38
LTBR-215ENST00000546296 GFPT1Q06210 699 aaPredicted RBP17.44■□□□□ 0.38
LTBR-215ENST00000546296 FZD5Q13467 585 aa17.44■□□□□ 0.38
LTBR-215ENST00000546296 MAMLD1Q13495 774 aa17.44■□□□□ 0.38
LTBR-215ENST00000546296 C15orf59Q2T9L4 293 aaPredicted RBP17.44■□□□□ 0.38
LTBR-215ENST00000546296 FAM133BQ5BKY9 247 aaKnown RBP17.44■□□□□ 0.38
LTBR-215ENST00000546296 OTUD1Q5VV17 481 aaPredicted RBP17.44■□□□□ 0.38
LTBR-215ENST00000546296 FYB2Q5VWT5 728 aa17.44■□□□□ 0.38
LTBR-215ENST00000546296 RAP1GAP2Q684P5 730 aa17.44■□□□□ 0.38
LTBR-215ENST00000546296 NADSYN1Q6IA69 706 aa17.44■□□□□ 0.38
LTBR-215ENST00000546296 GRAMD4Q6IC98 578 aa17.44■□□□□ 0.38
LTBR-215ENST00000546296 ETFBKMTQ8IXQ9 262 aa17.44■□□□□ 0.38
LTBR-215ENST00000546296 LGI2Q8N0V4 545 aa17.44■□□□□ 0.38
LTBR-215ENST00000546296 DTWD2Q8NBA8 298 aa17.44■□□□□ 0.38
LTBR-215ENST00000546296 CHP1Q99653 195 aa17.44■□□□□ 0.38
LTBR-215ENST00000546296 ADAM33Q9BZ11 813 aa17.44■□□□□ 0.38
LTBR-215ENST00000546296 TKTL2Q9H0I9 626 aa17.44■□□□□ 0.38
LTBR-215ENST00000546296 NHEJ1Q9H9Q4 299 aaPredicted RBP17.44■□□□□ 0.38
LTBR-215ENST00000546296 MRPL47Q9HD33 250 aaKnown RBP17.44■□□□□ 0.38
LTBR-215ENST00000546296 STIM2Q9P246 746 aa17.44■□□□□ 0.38
LTBR-215ENST00000546296 XPO7Q9UIA9 1087 aaKnown RBP17.44■□□□□ 0.38
LTBR-215ENST00000546296 SCINQ9Y6U3 715 aa17.44■□□□□ 0.38
LTBR-215ENST00000546296 TBL1XO60907 577 aa17.43■□□□□ 0.38
LTBR-215ENST00000546296 KAT7O95251 611 aa17.43■□□□□ 0.38
LTBR-215ENST00000546296 TACR2P21452 398 aa17.43■□□□□ 0.38
LTBR-215ENST00000546296 SLC6A4P31645 630 aa17.43■□□□□ 0.38
LTBR-215ENST00000546296 PTPN9P43378 593 aa17.43■□□□□ 0.38
LTBR-215ENST00000546296 DGKGP49619 791 aa17.43■□□□□ 0.38
LTBR-215ENST00000546296 ZNF143P52747 638 aaPredicted RBP17.43■□□□□ 0.38
LTBR-215ENST00000546296 ATXN1P54253 815 aaKnown RBP17.43■□□□□ 0.38
LTBR-215ENST00000546296 RPL7AP62424 266 aaKnown RBP17.43■□□□□ 0.38
LTBR-215ENST00000546296 MAPK8IP2Q13387 824 aaPredicted RBP17.43■□□□□ 0.38
LTBR-215ENST00000546296 CCINQ13939 588 aa17.43■□□□□ 0.38
LTBR-215ENST00000546296 SLC18A3Q16572 532 aa17.43■□□□□ 0.38
LTBR-215ENST00000546296 FBXO43Q4G163 708 aa17.43■□□□□ 0.38
LTBR-215ENST00000546296 PPP1R15BQ5SWA1 713 aa17.43■□□□□ 0.38
LTBR-215ENST00000546296 PIK3R6Q5UE93 754 aa17.43■□□□□ 0.38
LTBR-215ENST00000546296 PLEKHA7Q6IQ23 1121 aa17.43■□□□□ 0.38
LTBR-215ENST00000546296 CCDC117Q8IWD4 279 aaPredicted RBP17.43■□□□□ 0.38
LTBR-215ENST00000546296 SYNPOQ8N3V7 929 aa17.43■□□□□ 0.38
LTBR-215ENST00000546296 TC2NQ8N9U0 490 aa17.43■□□□□ 0.38
LTBR-215ENST00000546296 HJURPQ8NCD3 748 aaPredicted RBP17.43■□□□□ 0.38
LTBR-215ENST00000546296 CCDC26Q8TAB7 109 aa17.43■□□□□ 0.38
LTBR-215ENST00000546296 FAM172AQ8WUF8 416 aa17.43■□□□□ 0.38
LTBR-215ENST00000546296 IRX2Q9BZI1 471 aaPredicted RBP17.43■□□□□ 0.38
LTBR-215ENST00000546296 SIK2Q9H0K1 926 aa17.43■□□□□ 0.38
LTBR-215ENST00000546296 SPATA6Q9NWH7 488 aaPredicted RBP17.43■□□□□ 0.38
LTBR-215ENST00000546296 DLGAP2Q9P1A6 1054 aa17.43■□□□□ 0.38
LTBR-215ENST00000546296 F5H5T6 163 aa17.42■□□□□ 0.38
LTBR-215ENST00000546296 PAGE1O75459 146 aa17.42■□□□□ 0.38
LTBR-215ENST00000546296 ENDOD1O94919 500 aa17.42■□□□□ 0.38
LTBR-215ENST00000546296 SEC13P55735 322 aa17.42■□□□□ 0.38
LTBR-215ENST00000546296 MS4A13Q5J8X5 152 aa17.42■□□□□ 0.38
LTBR-215ENST00000546296 SH3PXD2AQ5TCZ1 1133 aa17.42■□□□□ 0.38
LTBR-215ENST00000546296 STRADAQ7RTN6 431 aa17.42■□□□□ 0.38
LTBR-215ENST00000546296 FAM131BQ86XD5 332 aa17.42■□□□□ 0.38
LTBR-215ENST00000546296 CNPY3Q9BT09 278 aa17.42■□□□□ 0.38
LTBR-215ENST00000546296 SLC2A11Q9BYW1 496 aa17.42■□□□□ 0.38
LTBR-215ENST00000546296 THAP2Q9H0W7 228 aa17.42■□□□□ 0.38
LTBR-215ENST00000546296 ARHGEF38Q9NXL2 777 aa17.42■□□□□ 0.38
LTBR-215ENST00000546296 TMEM191CA6NGB0 347 aa17.41■□□□□ 0.38
LTBR-215ENST00000546296 GFRA2O00451 464 aa17.41■□□□□ 0.38
LTBR-215ENST00000546296 TRIM24O15164 1050 aa17.41■□□□□ 0.38
LTBR-215ENST00000546296 PSMA2P25787 234 aa17.41■□□□□ 0.38
LTBR-215ENST00000546296 CDC25BP30305 580 aa17.41■□□□□ 0.38
LTBR-215ENST00000546296 TNFRSF4P43489 277 aa17.41■□□□□ 0.38
LTBR-215ENST00000546296 SGSHP51688 502 aa17.41■□□□□ 0.38
LTBR-215ENST00000546296 NUBP1P53384 320 aa17.41■□□□□ 0.38
LTBR-215ENST00000546296 ASTE1Q2TB18 679 aaPredicted RBP17.41■□□□□ 0.38
LTBR-215ENST00000546296 ARL13BQ3SXY8 428 aa17.41■□□□□ 0.38
LTBR-215ENST00000546296 RABGAP1LQ5R372 815 aa17.41■□□□□ 0.38
LTBR-215ENST00000546296 MPP7Q5T2T1 576 aa17.41■□□□□ 0.38
LTBR-215ENST00000546296 SCYL2Q6P3W7 929 aa17.41■□□□□ 0.38
LTBR-215ENST00000546296 BNIPLQ7Z465 357 aa17.41■□□□□ 0.38
LTBR-215ENST00000546296 CFAP52Q8N1V2 620 aa17.41■□□□□ 0.38
LTBR-215ENST00000546296 SPC24Q8NBT2 197 aa17.41■□□□□ 0.38
LTBR-215ENST00000546296 CENPIQ92674 756 aaPredicted RBP17.41■□□□□ 0.38
LTBR-215ENST00000546296 P2RY11Q96G91 374 aa17.41■□□□□ 0.38
LTBR-215ENST00000546296 CHRDQ9H2X0 955 aa17.41■□□□□ 0.38
LTBR-215ENST00000546296 HS3ST4Q9Y661 456 aa17.41■□□□□ 0.38
LTBR-215ENST00000546296 F5P12259 2224 aa17.41■□□□□ 0.38
LTBR-215ENST00000546296 GOLGA6L6A8MZA4 724 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 K7EQS6 105 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 CCP110O43303 1012 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 ATG13O75143 517 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 RNF40O75150 1001 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 H2AFZP0C0S5 128 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 CISD3P0C7P0 127 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 HOXD9P28356 352 aaPredicted RBP17.4■□□□□ 0.38
LTBR-215ENST00000546296 GALCP54803 685 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 RPS24P62847 133 aaKnown RBP17.4■□□□□ 0.38
LTBR-215ENST00000546296 MESP2Q0VG99 397 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 MTAPQ13126 283 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 AUHQ13825 339 aaKnown RBP17.4■□□□□ 0.38
LTBR-215ENST00000546296 RAB6CQ53S08 254 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 C2orf27AQ580R0 203 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 C10orf76Q5T2E6 689 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 Q6ZS52 159 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 H2AFVQ71UI9 128 aa17.4■□□□□ 0.38
LTBR-215ENST00000546296 PHTF2Q8N3S3 785 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms