RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 BST2Q10589 180 aaKnown RBP13.11□□□□□ -0.31
COPS7A-221ENST00000546229 SCAPQ12770 1279 aa13.11□□□□□ -0.31
COPS7A-221ENST00000546229 CUL2Q13617 745 aa13.11□□□□□ -0.31
COPS7A-221ENST00000546229 COL9A2Q14055 689 aaPredicted RBP13.11□□□□□ -0.31
COPS7A-221ENST00000546229 KCNT1Q5JUK3 1230 aa13.11□□□□□ -0.31
COPS7A-221ENST00000546229 LRSAM1Q6UWE0 723 aa13.11□□□□□ -0.31
COPS7A-221ENST00000546229 ZNF366Q8N895 744 aa13.11□□□□□ -0.31
COPS7A-221ENST00000546229 SPATA20Q8TB22 786 aa13.11□□□□□ -0.31
COPS7A-221ENST00000546229 CYB5D2Q8WUJ1 264 aa13.11□□□□□ -0.31
COPS7A-221ENST00000546229 KCTD13Q8WZ19 329 aa13.11□□□□□ -0.31
COPS7A-221ENST00000546229 TFAP2BQ92481 460 aa13.11□□□□□ -0.31
COPS7A-221ENST00000546229 PRCCQ92733 491 aaPredicted RBP13.11□□□□□ -0.31
COPS7A-221ENST00000546229 SLC35C1Q96A29 364 aa13.11□□□□□ -0.31
COPS7A-221ENST00000546229 PRICKLE1Q96MT3 831 aaPredicted RBP13.11□□□□□ -0.31
COPS7A-221ENST00000546229 CIPCQ9C0C6 399 aa13.11□□□□□ -0.31
COPS7A-221ENST00000546229 OSGEPQ9NPF4 335 aa13.11□□□□□ -0.31
COPS7A-221ENST00000546229 EIF2B4Q9UI10 523 aaKnown RBP13.11□□□□□ -0.31
COPS7A-221ENST00000546229 BTBD3Q9Y2F9 522 aa13.11□□□□□ -0.31
COPS7A-221ENST00000546229 PCDHGB2Q9Y5G2 931 aa13.11□□□□□ -0.31
COPS7A-221ENST00000546229 GCN1Q92616 2671 aaKnown RBP13.1□□□□□ -0.31
COPS7A-221ENST00000546229 A0A1B0GVT2 93 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 SLC16A3O15427 465 aaKnown RBP13.1□□□□□ -0.31
COPS7A-221ENST00000546229 ZBTB24O43167 697 aaPredicted RBP13.1□□□□□ -0.31
COPS7A-221ENST00000546229 ZNF202O95125 648 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 SLC6A4P31645 630 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 PRCPP42785 496 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 RPS14P62263 151 aaKnown RBP13.1□□□□□ -0.31
COPS7A-221ENST00000546229 KRT85P78386 507 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 HLA-BQ31612 363 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 MPPE1Q53F39 396 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 BSPRYQ5W0U4 402 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 NADSYN1Q6IA69 706 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 SERPINA13PQ6UXR4 307 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 SPRYD3Q8NCJ5 442 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 WFIKKN2Q8TEU8 576 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 DDI1Q8WTU0 396 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 UCMAQ8WVF2 138 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 EDEM1Q92611 657 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 NUP58Q9BVL2 599 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 LHX5Q9H2C1 402 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 GAREM1Q9H706 876 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 PRSS16Q9NQE7 514 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 TM7SF3Q9NS93 570 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 OLA1Q9NTK5 396 aaKnown RBP13.1□□□□□ -0.31
COPS7A-221ENST00000546229 ABCB8Q9NUT2 735 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 KIAA1522Q9P206 1035 aaPredicted RBP13.1□□□□□ -0.31
COPS7A-221ENST00000546229 SFMBT1Q9UHJ3 866 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 GGA2Q9UJY4 613 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 STRIP2Q9ULQ0 834 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 LHX6Q9UPM6 363 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 KALRNO60229 2985 aa13.1□□□□□ -0.31
COPS7A-221ENST00000546229 PAPSS1O43252 624 aaPredicted RBP13.09□□□□□ -0.31
COPS7A-221ENST00000546229 TIMM44O43615 452 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 SYNCRIPO60506 623 aaKnown RBP13.09□□□□□ -0.31
COPS7A-221ENST00000546229 TSPAN3O60637 253 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 CER1O95813 267 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 CYBBP04839 570 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 FYNP06241 537 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 IGHV4-34P06331 123 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 SETSIPP0DME0 302 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 CD70P32970 193 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 MATKP42679 507 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 ZNF445P59923 1031 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 PNOCQ13519 176 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 CAMK2BQ13554 666 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 KIF19Q2TAC6 998 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 SGO2Q562F6 1265 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 ADGRF1Q5T601 910 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 PIK3R6Q5UE93 754 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 LAYNQ6UX15 382 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 CHST9Q7L1S5 443 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 RSRC2Q7L4I2 434 aaKnown RBP13.09□□□□□ -0.31
COPS7A-221ENST00000546229 FMR1NBQ8N0W7 255 aaPredicted RBP13.09□□□□□ -0.31
COPS7A-221ENST00000546229 CCDC150Q8NCX0 1101 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 LMO3Q8TAP4 145 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 CLEC4CQ8WTT0 213 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 SLC35F5Q8WV83 523 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 BIRC7Q96CA5 298 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 MRGPRX3Q96LB0 322 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 TM9SF3Q9HD45 589 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 CNGB3Q9NQW8 809 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 DKK4Q9UBT3 224 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 SERGEFQ9UGK8 458 aa13.09□□□□□ -0.31
COPS7A-221ENST00000546229 INTS6Q9UL03 887 aaKnown RBP13.09□□□□□ -0.31
COPS7A-221ENST00000546229 TRIM49BA6NDI0 452 aa13.08□□□□□ -0.32
COPS7A-221ENST00000546229 RNF225M0QZC1 329 aaPredicted RBP13.08□□□□□ -0.32
COPS7A-221ENST00000546229 FLRT2O43155 660 aa13.08□□□□□ -0.32
COPS7A-221ENST00000546229 DLDP09622 509 aaKnown RBP13.08□□□□□ -0.32
COPS7A-221ENST00000546229 ATXN1LP0C7T5 689 aaKnown RBP13.08□□□□□ -0.32
COPS7A-221ENST00000546229 EPB41P11171 864 aaKnown RBP13.08□□□□□ -0.32
COPS7A-221ENST00000546229 PABPC1P11940 636 aaKnown RBP13.08□□□□□ -0.32
COPS7A-221ENST00000546229 CTSKP43235 329 aa13.08□□□□□ -0.32
COPS7A-221ENST00000546229 GRIA4P48058 902 aa13.08□□□□□ -0.32
COPS7A-221ENST00000546229 RPL34P49207 117 aaKnown RBP13.08□□□□□ -0.32
COPS7A-221ENST00000546229 CSNK1EP49674 416 aaKnown RBP13.08□□□□□ -0.32
COPS7A-221ENST00000546229 MPP7Q5T2T1 576 aa13.08□□□□□ -0.32
COPS7A-221ENST00000546229 MBLAC2Q68D91 279 aa13.08□□□□□ -0.32
COPS7A-221ENST00000546229 PMF1Q6P1K2 205 aa13.08□□□□□ -0.32
COPS7A-221ENST00000546229 RFWD3Q6PCD5 774 aa13.08□□□□□ -0.32
COPS7A-221ENST00000546229 LCLAT1Q6UWP7 414 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms