RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 BCLAF3A2AJT9 711 aaKnown RBP20.49■□□□□ 0.87
BPTF-208ENST00000544778 ENTPD3O75355 529 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 KRT6AP02538 564 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 KRT6BP04259 564 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 KRT6CP48668 564 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 KIAA0408Q6ZU52 694 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 EZH2Q15910 746 aaKnown RBP20.49■□□□□ 0.87
BPTF-208ENST00000544778 A1CFQ9NQ94 594 aaKnown RBP20.49■□□□□ 0.87
BPTF-208ENST00000544778 LIMD1Q9UGP4 676 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 TNFSF13BQ9Y275 285 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 ADGRL3Q9HAR2 1447 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 SLC25A12O75746 678 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 PLEKP08567 350 aaPredicted RBP20.49■□□□□ 0.87
BPTF-208ENST00000544778 SUPT20HL2P0C7V6 817 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 POLR2EP19388 210 aaKnown RBP20.49■□□□□ 0.87
BPTF-208ENST00000544778 KPNB1Q14974 876 aaKnown RBP20.49■□□□□ 0.87
BPTF-208ENST00000544778 FAM171A1Q5VUB5 890 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 KRT74Q7RTS7 529 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.49■□□□□ 0.875e-6■■■■□ 23.6
BPTF-208ENST00000544778 NYAP2Q9P242 653 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 IDH3BO43837 385 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 CYP2A6P11509 494 aaPredicted RBP20.49■□□□□ 0.87
BPTF-208ENST00000544778 NMD3Q96D46 503 aaKnown RBP20.49■□□□□ 0.87
BPTF-208ENST00000544778 RHOBTB2Q9BYZ6 727 aa20.49■□□□□ 0.87
BPTF-208ENST00000544778 SENP6Q9GZR1 1112 aaPredicted RBP20.49■□□□□ 0.87
BPTF-208ENST00000544778 KPNA3O00505 521 aaPredicted RBP20.48■□□□□ 0.87
BPTF-208ENST00000544778 THOP1P52888 689 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 SGMS1Q86VZ5 419 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 TRAPPC5Q8IUR0 188 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 ZDHHC6Q9H6R6 413 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 MORC2Q9Y6X9 1032 aaPredicted RBP20.48■□□□□ 0.87
BPTF-208ENST00000544778 RBAK-RBAKDNI3L0D1 243 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 CES2O00748 559 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 TPH1P17752 444 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 SEC24CP53992 1094 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 COPZ1P61923 177 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 POM121L1PQ3SYA9 428 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 EPB41L4BQ9H329 900 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 IL12RB1P42701 662 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 TBX4P57082 545 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 MPP3Q13368 585 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 RIT2Q99578 217 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 SNTG2Q9NY99 539 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 ARHGAP31Q2M1Z3 1444 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 CYP2F1P24903 491 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 SRP54P61011 504 aaKnown RBP20.48■□□□□ 0.87
BPTF-208ENST00000544778 BTG3Q14201 252 aaPredicted RBP20.48■□□□□ 0.87
BPTF-208ENST00000544778 TAF5Q15542 800 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 IQCF2Q8IXL9 164 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 ENGASEQ8NFI3 743 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 SLC40A1Q9NP59 571 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 NCKIPSDQ9NZQ3 722 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 CLK3P49761 638 aaKnown RBP20.48■□□□□ 0.87
BPTF-208ENST00000544778 MAD2L1Q13257 205 aaPredicted RBP20.48■□□□□ 0.87
BPTF-208ENST00000544778 TTC23Q5W5X9 447 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 MAGEB18Q96M61 343 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 CBWD1Q9BRT8 395 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 JMJD4Q9H9V9 463 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 CYLDQ9NQC7 956 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 CHKBQ9Y259 395 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 OGTO15294 1046 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 INPP4BO15327 924 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 RAD23AP54725 363 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 NEK7Q8TDX7 302 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 TMEM120AQ9BXJ8 343 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 PIH1D1Q9NWS0 290 aaKnown RBP20.48■□□□□ 0.87
BPTF-208ENST00000544778 ZMYND8Q9ULU4 1186 aaPredicted RBP20.48■□□□□ 0.87
BPTF-208ENST00000544778 ZNF232Q9UNY5 417 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 GPSM3Q9Y4H4 160 aa20.48■□□□□ 0.87
BPTF-208ENST00000544778 AMHP03971 560 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 GSTM5P46439 218 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 MRPS35P82673 323 aaKnown RBP20.47■□□□□ 0.87
BPTF-208ENST00000544778 NR1I3Q14994 352 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 INSCQ1MX18 579 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 ESRP1Q6NXG1 681 aaKnown RBP20.47■□□□□ 0.87
BPTF-208ENST00000544778 PRKD2Q9BZL6 878 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 ADPRHL2Q9NX46 363 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 A0A088AWK7 358 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 FCGR1AP12314 374 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 ZNF10P21506 573 aaPredicted RBP20.47■□□□□ 0.87
BPTF-208ENST00000544778 HSD17B3P37058 310 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 TPGS1Q6ZTW0 290 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 OSMRQ99650 979 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 AGPAT3Q9NRZ7 376 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 GPN3Q9UHW5 284 aaPredicted RBP20.47■□□□□ 0.87
BPTF-208ENST00000544778 SPATA31A3Q5VYP0 1347 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 FBXO21O94952 628 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 CCR1P32246 355 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 DMPKQ09013 629 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 MARC1Q5VT66 337 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 FRMD8P1Q9BZ68 369 aaPredicted RBP20.47■□□□□ 0.87
BPTF-208ENST00000544778 MPOP05164 745 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 KLRC1P26715 233 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 FXR1P51114 621 aaKnown RBP eCLIP20.47■□□□□ 0.878e-7■■■□□ 15.7
BPTF-208ENST00000544778 ATP1A4Q13733 1029 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 RASA2Q15283 850 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 FAM220AQ7Z4H9 259 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 STX12Q86Y82 276 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 DSELQ8IZU8 1212 aa20.47■□□□□ 0.87
BPTF-208ENST00000544778 ARHGAP28Q9P2N2 729 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms