RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 GRAMD1BQ3KR37 738 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 NME8Q8N427 588 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 ARFGAP1Q8N6T3 406 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 STKLD1Q8NE28 680 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 E2F7Q96AV8 911 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 FAM167AQ96KS9 214 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 CDT1Q9H211 546 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 GPAMQ9HCL2 828 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 MRPL47Q9HD33 250 aaKnown RBP9.42□□□□□ -0.9
THBS3-211ENST00000541990 ZDHHC7Q9NXF8 308 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 SLC17A6Q9P2U8 582 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 NXF1Q9UBU9 619 aaKnown RBP9.42□□□□□ -0.9
THBS3-211ENST00000541990 AK5Q9Y6K8 562 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 IQANK1A0A1B0GTG1 560 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 I3L4J1 428 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 HCRTO43612 131 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 PFDN1O60925 122 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 MAP3K6O95382 1288 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 PROCP04070 461 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 ASGR1P07306 291 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 PSEN2P49810 448 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 GALK1P51570 392 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 MYL6P60660 151 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 HPCAP84074 193 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 PURAQ00577 322 aaKnown RBP9.42□□□□□ -0.9
THBS3-211ENST00000541990 TUBB3Q13509 450 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 NADK2Q4G0N4 442 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 DNAL1Q4LDG9 190 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 KLHDC10Q6PID8 442 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 C15orf39Q6ZRI6 1047 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 TMC7Q7Z402 723 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 POLNQ7Z5Q5 900 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 ZNF467Q7Z7K2 595 aaPredicted RBP9.42□□□□□ -0.9
THBS3-211ENST00000541990 SDCCAG8Q86SQ7 713 aaPredicted RBP9.42□□□□□ -0.9
THBS3-211ENST00000541990 RNF169Q8NCN4 708 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 TMEM174Q8WUU8 243 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 ABTB1Q969K4 478 aaPredicted RBP9.42□□□□□ -0.9
THBS3-211ENST00000541990 PRICKLE1Q96MT3 831 aaPredicted RBP9.42□□□□□ -0.9
THBS3-211ENST00000541990 PLEKHG4BQ96PX9 1271 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 KLHL4Q9C0H6 718 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 GOLGA2P5Q9HBQ8 144 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 IP6K2Q9UHH9 426 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 POLIQ9UNA4 740 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 PPME1Q9Y570 386 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 NUB1Q9Y5A7 615 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 EYSQ5T1H1 3165 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 TRPM7Q96QT4 1865 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.42□□□□□ -0.9
THBS3-211ENST00000541990 SDR42E2A6NKP2 422 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 H3BNX3 289 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 PPEF2O14830 753 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 SERPINB6P35237 376 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 FOLH1Q04609 750 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 AMHR2Q16671 573 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 PPP6R3Q5H9R7 873 aaPredicted RBP9.42□□□□□ -0.9
THBS3-211ENST00000541990 VWA5B1Q5TIE3 1220 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 GDF6Q6KF10 455 aaPredicted RBP9.42□□□□□ -0.9
THBS3-211ENST00000541990 C16orf46Q6P387 395 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 KYAT3Q6YP21 454 aaKnown RBP9.42□□□□□ -0.9
THBS3-211ENST00000541990 MAVSQ7Z434 540 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 PHF13Q86YI8 300 aaPredicted RBP9.42□□□□□ -0.9
THBS3-211ENST00000541990 ZBTB8OSQ8IWT0 167 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 PDIK1LQ8N165 341 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 C7orf31Q8N865 590 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 RAET1EQ8TD07 263 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 FBXL18Q96ME1 805 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 C7orf26Q96N11 449 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 LPIN3Q9BQK8 851 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 MRPL4Q9BYD3 311 aaKnown RBP9.42□□□□□ -0.9
THBS3-211ENST00000541990 IQCGQ9H095 443 aaKnown RBP9.42□□□□□ -0.9
THBS3-211ENST00000541990 ST6GALNAC4Q9H4F1 302 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 PPCSQ9HAB8 311 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 XPNPEP3Q9NQH7 507 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 PARVAQ9NVD7 372 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 IL1RAPL1Q9NZN1 696 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 FETUBQ9UGM5 382 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 SOX13Q9UN79 622 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 PLLPQ9Y342 182 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 TTLL3Q9Y4R7 772 aa9.42□□□□□ -0.9
THBS3-211ENST00000541990 LOC100653049A0A140TA62 436 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 TCRBV5S1A1TA0A578 114 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 LRRC37A2A6NM11 1700 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 EXTL3O43909 919 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 RFPL1O75677 317 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 KRT34O76011 436 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 HOXC6P09630 235 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 CSH1P0DML2 217 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 CSH2P0DML3 217 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 IMPDH2P12268 514 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 CYBAP13498 195 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 MMP8P22894 467 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 TPP2P29144 1249 aaPredicted RBP9.41□□□□□ -0.9
THBS3-211ENST00000541990 GTF2H1P32780 548 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 CHN2P52757 468 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 CUL2Q13617 745 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 MYLK3Q32MK0 819 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 ANKRD20A4Q4UJ75 823 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 DCUN1D2Q6PH85 259 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 TMC2Q8TDI7 906 aa9.41□□□□□ -0.9
THBS3-211ENST00000541990 RSAD2Q8WXG1 361 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms