RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 GJB7Q6PEY0 223 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 TMEM110Q86TL2 294 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 WDTC1Q8N5D0 677 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 OR2I1PQ8NGU4 316 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 C1orf216Q8TAB5 229 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 CEP76Q8TAP6 659 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 STK32AQ8WU08 396 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 ZNF606Q8WXB4 792 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 TOE1Q96GM8 510 aaKnown RBP12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 MYO19Q96H55 970 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 HSPA12BQ96MM6 686 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 NUSAP1Q9BXS6 441 aaKnown RBP12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 MIS12Q9H081 205 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 UBE2TQ9NPD8 197 aaPredicted RBP12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 KIAA1468Q9P260 1216 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 NAALADL1Q9UQQ1 740 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 FRYQ5TBA9 3013 aa12.3□□□□□ -0.44
CLSTN3-211ENST00000541667 SPEGQ15772 3267 aa12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 NUMA1Q14980 2115 aa12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 ASPMQ8IZT6 3477 aa12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 UPK3BL1B0FP48 263 aa12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 UPK3BL2E5RIL1 263 aa12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 PAPSS1O43252 624 aaPredicted RBP12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 ACSL4O60488 711 aa12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 HLA-EP13747 358 aa12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 CD59P13987 128 aa12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 SLC9A1P19634 815 aa12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 KCNA4P22459 653 aa12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 CD70P32970 193 aa12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 DPP6P42658 865 aa12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 MAPK8P45983 427 aa12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 CETN1Q12798 172 aa12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 UAP1L1Q3KQV9 507 aa12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 KIAA1324Q6UXG2 1013 aaKnown RBP12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 BEND5Q7L4P6 421 aa12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 DQX1Q8TE96 717 aaKnown RBP12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 CYB5D2Q8WUJ1 264 aa12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 UCMAQ8WVF2 138 aa12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 PRICKLE1Q96MT3 831 aaPredicted RBP12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 IRX2Q9BZI1 471 aaPredicted RBP12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 CIPCQ9C0C6 399 aa12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 ABCB8Q9NUT2 735 aa12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 RWDD2AQ9UIY3 292 aa12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 ANGPTL2Q9UKU9 493 aa12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 INTS6Q9UL03 887 aaKnown RBP12.29□□□□□ -0.44
CLSTN3-211ENST00000541667 KNL1Q8NG31 2342 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 ZFHX4Q86UP3 3567 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 METTL12A8MUP2 240 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 ARHGAP33O14559 1287 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 FBXO21O94952 628 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 IGLV3-25P01717 112 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 TBX4P57082 545 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 ZNF445P59923 1031 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 FAM193AP78312 1265 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 PITX1P78337 314 aaPredicted RBP12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 STARD3Q14849 445 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 TAF5Q15542 800 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 CAMK4Q16566 473 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 MEA1Q16626 185 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 FSCBQ5H9T9 825 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 CHST9Q7L1S5 443 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 UNC45BQ8IWX7 931 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 DEFB124Q8NES8 71 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 CADM4Q8NFZ8 388 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 FIBINQ8TAL6 211 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 TTC17Q96AE7 1141 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 SIPA1Q96FS4 1042 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 CRACR2AQ9BSW2 395 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 GPR174Q9BXC1 333 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 TMEM121BQ9BXQ6 578 aaPredicted RBP12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 SIX2Q9NPC8 291 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 PRSS16Q9NQE7 514 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 TJP2Q9UDY2 1190 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 XPO7Q9UIA9 1087 aaKnown RBP12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 GGA2Q9UJY4 613 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 AJAP1Q9UKB5 411 aaPredicted RBP12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 NFE2L3Q9Y4A8 694 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 SLCO1B1Q9Y6L6 691 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 USP24Q9UPU5 2620 aa12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 MUC22E2RYF6 1773 aaPredicted RBP12.28□□□□□ -0.44
CLSTN3-211ENST00000541667 C10orf142B7Z368 130 aa12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 ZBTB24O43167 697 aaPredicted RBP12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 SYNCRIPO60506 623 aaKnown RBP12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 TBL1XO60907 577 aa12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 NDUFS2O75306 463 aa12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 CFIP05156 583 aa12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 EPHX1P07099 455 aa12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 PABPC1P11940 636 aaKnown RBP12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 PON1P27169 355 aa12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 UBE2HP62256 183 aa12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 RPS24P62847 133 aaKnown RBP12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 BNC1Q01954 994 aa12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 GFPT1Q06210 699 aaPredicted RBP12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 NNTQ13423 1086 aa12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 MS4A13Q5J8X5 152 aa12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 NUGGCQ68CJ6 796 aa12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 MBLAC2Q68D91 279 aa12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 TRIM65Q6PJ69 517 aa12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 ZNF366Q8N895 744 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms