RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 ZNF473Q8WTR7 871 aaKnown RBP6.36□□□□□ -1.39
LMO3-225ENST00000541295 DNAJC9Q8WXX5 260 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 KRT35Q92764 455 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 EXT2Q93063 718 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 RAD51AP1Q96B01 352 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 AKT1S1Q96B36 256 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 ZNF560Q96MR9 790 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 CCDC43Q96MW1 224 aaKnown RBP6.36□□□□□ -1.39
LMO3-225ENST00000541295 TUBB2BQ9BVA1 445 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 TRIM2Q9C040 744 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 DCLK3Q9C098 648 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 SENP6Q9GZR1 1112 aaPredicted RBP6.36□□□□□ -1.39
LMO3-225ENST00000541295 TMEM168Q9H0V1 697 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 LIN7BQ9HAP6 207 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 ZSWIM5Q9P217 1185 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 POLLQ9UGP5 575 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.36□□□□□ -1.39
LMO3-225ENST00000541295 GINS2Q9Y248 185 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 TMEM120BA0PK00 339 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 PRR5-ARHGAP8B1AHC4 643 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 GPR89AB7ZAQ6 455 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 E9PBE3 544 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 H0YIV9 168 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 CLOCKO15516 846 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 ATP2C2O75185 946 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 HEXIM1O94992 359 aaKnown RBP6.36□□□□□ -1.39
LMO3-225ENST00000541295 ESRRBO95718 433 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 OCM2P0CE71 109 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 OCMP0CE72 109 aaPredicted RBP6.36□□□□□ -1.39
LMO3-225ENST00000541295 GPR89BP0CG08 455 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 COL6A2P12110 1019 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 CPB1P15086 417 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 ATP2B4P23634 1241 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 CNTFP26441 200 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 CHRNA5P30532 468 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 HOXA6P31267 233 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 BCAP31P51572 246 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 ZNF75DP51815 510 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 ARHGDIAP52565 204 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 NKX2-5P52952 324 aaPredicted RBP6.36□□□□□ -1.39
LMO3-225ENST00000541295 SSRP1Q08945 709 aaKnown RBP6.36□□□□□ -1.39
LMO3-225ENST00000541295 C19orf57Q0VDD7 668 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 HABP2Q14520 560 aaPredicted RBP6.36□□□□□ -1.39
LMO3-225ENST00000541295 ZNF674Q2M3X9 581 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 MFSD14BQ5SR56 506 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 FAM160B2Q86V87 743 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 C2CD5Q86YS7 1000 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 MAP4K3Q8IVH8 894 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 CMTR1Q8N1G2 835 aaKnown RBP6.36□□□□□ -1.39
LMO3-225ENST00000541295 BBS5Q8N3I7 341 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 CNTD1Q8N815 330 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.36□□□□□ -1.39
LMO3-225ENST00000541295 C11orf65Q8NCR3 313 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 DENND6BQ8NEG7 585 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 DNAJB8Q8NHS0 232 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 CCDC12Q8WUD4 166 aaPredicted RBP6.36□□□□□ -1.39
LMO3-225ENST00000541295 TGFBRAP1Q8WUH2 860 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 WASF1Q92558 559 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 DNAJC1Q96KC8 554 aaKnown RBP6.36□□□□□ -1.39
LMO3-225ENST00000541295 PURBQ96QR8 312 aaKnown RBP6.36□□□□□ -1.39
LMO3-225ENST00000541295 BBS2Q9BXC9 721 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 STK33Q9BYT3 514 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 IFIH1Q9BYX4 1025 aaKnown RBP6.36□□□□□ -1.39
LMO3-225ENST00000541295 FRMD8Q9BZ67 464 aaPredicted RBP6.36□□□□□ -1.39
LMO3-225ENST00000541295 FRMD8P1Q9BZ68 369 aaPredicted RBP6.36□□□□□ -1.39
LMO3-225ENST00000541295 CRISPLD2Q9H0B8 497 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 CD209Q9NNX6 404 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 STK17AQ9UEE5 414 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 RGS17Q9UGC6 210 aaPredicted RBP6.36□□□□□ -1.39
LMO3-225ENST00000541295 ERGIC3Q9Y282 383 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 MRPS7Q9Y2R9 242 aaKnown RBP6.36□□□□□ -1.39
LMO3-225ENST00000541295 SLC12A7Q9Y666 1083 aa6.36□□□□□ -1.39
LMO3-225ENST00000541295 PVALEFA0A1B0GWK0 134 aa6.35□□□□□ -1.39
LMO3-225ENST00000541295 SH2B2O14492 632 aaPredicted RBP6.35□□□□□ -1.39
LMO3-225ENST00000541295 OPLAHO14841 1288 aa6.35□□□□□ -1.39
LMO3-225ENST00000541295 FAM13AO94988 1023 aa6.35□□□□□ -1.39
LMO3-225ENST00000541295 ALX3O95076 343 aa6.35□□□□□ -1.39
LMO3-225ENST00000541295 ZNF202O95125 648 aa6.35□□□□□ -1.39
LMO3-225ENST00000541295 CFBP00751 764 aa6.35□□□□□ -1.39
LMO3-225ENST00000541295 DBTP11182 482 aaKnown RBP6.35□□□□□ -1.39
LMO3-225ENST00000541295 CASP14P31944 242 aa6.35□□□□□ -1.39
LMO3-225ENST00000541295 NUDT1P36639 197 aa6.35□□□□□ -1.39
LMO3-225ENST00000541295 EIF4A3P38919 411 aaKnown RBP6.35□□□□□ -1.39
LMO3-225ENST00000541295 CASP5P51878 434 aa6.35□□□□□ -1.39
LMO3-225ENST00000541295 ECT2LQ008S8 904 aa6.35□□□□□ -1.39
LMO3-225ENST00000541295 RCN2Q14257 317 aa6.35□□□□□ -1.39
LMO3-225ENST00000541295 PTPAQ15257 358 aa6.35□□□□□ -1.39
LMO3-225ENST00000541295 TEAD4Q15561 434 aa6.35□□□□□ -1.39
LMO3-225ENST00000541295 NPTX1Q15818 432 aa6.35□□□□□ -1.39
LMO3-225ENST00000541295 AANATQ16613 207 aa6.35□□□□□ -1.39
LMO3-225ENST00000541295 LSM12Q3MHD2 195 aaKnown RBP6.35□□□□□ -1.39
LMO3-225ENST00000541295 CRY2Q49AN0 593 aa6.35□□□□□ -1.39
LMO3-225ENST00000541295 SLC6A19Q695T7 634 aa6.35□□□□□ -1.39
LMO3-225ENST00000541295 LRIG3Q6UXM1 1119 aa6.35□□□□□ -1.39
LMO3-225ENST00000541295 DPP8Q6V1X1 898 aaPredicted RBP6.35□□□□□ -1.39
LMO3-225ENST00000541295 MAPKAPK5Q8IW41 473 aa6.35□□□□□ -1.39
LMO3-225ENST00000541295 SLFN12Q8IYM2 578 aa6.35□□□□□ -1.39
LMO3-225ENST00000541295 AFAP1L2Q8N4X5 818 aa6.35□□□□□ -1.39
LMO3-225ENST00000541295 NKAPQ8N5F7 415 aaKnown RBP6.35□□□□□ -1.39
LMO3-225ENST00000541295 TBC1D16Q8TBP0 767 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms