RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 GJB6O95452 261 aa18.98■□□□□ 0.63
SNRPA1-203ENST00000540017 APOEP02649 317 aa18.98■□□□□ 0.63
SNRPA1-203ENST00000540017 NRLP54845 237 aa18.98■□□□□ 0.63
SNRPA1-203ENST00000540017 ZNF445P59923 1031 aa18.98■□□□□ 0.63
SNRPA1-203ENST00000540017 RPS24P62847 133 aaKnown RBP18.98■□□□□ 0.63
SNRPA1-203ENST00000540017 NME3Q13232 169 aa18.98■□□□□ 0.63
SNRPA1-203ENST00000540017 SRSF5Q13243 272 aaKnown RBP18.98■□□□□ 0.63
SNRPA1-203ENST00000540017 FIGNQ5HY92 759 aa18.98■□□□□ 0.63
SNRPA1-203ENST00000540017 RAP1GAP2Q684P5 730 aa18.98■□□□□ 0.63
SNRPA1-203ENST00000540017 ZC3H14Q6PJT7 736 aaKnown RBP18.98■□□□□ 0.63
SNRPA1-203ENST00000540017 ZNF513Q8N8E2 541 aaPredicted RBP18.98■□□□□ 0.63
SNRPA1-203ENST00000540017 MSANTD4Q8NCY6 345 aa18.98■□□□□ 0.63
SNRPA1-203ENST00000540017 RNF214Q8ND24 703 aa18.98■□□□□ 0.63
SNRPA1-203ENST00000540017 NKD2Q969F2 451 aaPredicted RBP18.98■□□□□ 0.63
SNRPA1-203ENST00000540017 TBCBQ99426 244 aa18.98■□□□□ 0.63
SNRPA1-203ENST00000540017 SLC2A11Q9BYW1 496 aa18.98■□□□□ 0.63
SNRPA1-203ENST00000540017 ANLNQ9NQW6 1124 aa18.98■□□□□ 0.63
SNRPA1-203ENST00000540017 METTL5Q9NRN9 209 aaKnown RBP18.98■□□□□ 0.63
SNRPA1-203ENST00000540017 PIGVQ9NUD9 493 aa18.98■□□□□ 0.63
SNRPA1-203ENST00000540017 SEPT11Q9NVA2 429 aaKnown RBP18.98■□□□□ 0.63
SNRPA1-203ENST00000540017 AIPL1Q9NZN9 384 aa18.98■□□□□ 0.63
SNRPA1-203ENST00000540017 MYO18AQ92614 2054 aaKnown RBP18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 PRR23AA6NEV1 266 aa18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 HRO43593 1189 aa18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 GBP1P32455 592 aa18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 WASP42768 502 aa18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 SULT1E1P49888 294 aa18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 ATXN1P54253 815 aaKnown RBP18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 ASIC2Q16515 512 aa18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 CRY1Q16526 586 aa18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 MS4A13Q5J8X5 152 aa18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 TMEM215Q68D42 235 aa18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 NUDT18Q6ZVK8 323 aa18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 MON1BQ7L1V2 547 aa18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 LONP2Q86WA8 852 aa18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 PHF13Q86YI8 300 aaPredicted RBP18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 CFAP52Q8N1V2 620 aa18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 EMC1Q8N766 993 aa18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 SUMF1Q8NBK3 374 aa18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 BTN2A3PQ96KV6 586 aa18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 PRMT1Q99873 361 aaKnown RBP18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 EDEM3Q9BZQ6 932 aa18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 XPO4Q9C0E2 1151 aaKnown RBP18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 TAS2R14Q9NYV8 317 aa18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 STIM2Q9P246 746 aa18.97■□□□□ 0.63
SNRPA1-203ENST00000540017 I6L893 689 aaPredicted RBP18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 CCDC172P0C7W6 258 aa18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 TACR2P21452 398 aa18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 HLA-FP30511 346 aa18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 HOXD11P31277 338 aaPredicted RBP18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 CCR1P32246 355 aa18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 NSFP46459 744 aaKnown RBP18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 SLC25A52Q3SY17 297 aa18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 HSF5Q4G112 596 aaPredicted RBP18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 RAB6CQ53S08 254 aa18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 MPP7Q5T2T1 576 aa18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 SFMBT2Q5VUG0 894 aa18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 ZNF571Q7Z3V5 609 aaPredicted RBP18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 BNIPLQ7Z465 357 aa18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 WDR5BQ86VZ2 330 aa18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 LGI2Q8N0V4 545 aa18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 CAMKK1Q8N5S9 505 aa18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 ATP6V0D2Q8N8Y2 350 aa18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 JOSD2Q8TAC2 188 aa18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 KCNV2Q8TDN2 545 aa18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 RNF34Q969K3 372 aa18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 PGAP3Q96FM1 320 aaPredicted RBP18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 CFAP57Q96MR6 1250 aa18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 DDX50Q9BQ39 737 aaKnown RBP18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 RAB6CQ9H0N0 254 aa18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 HAUS4Q9H6D7 363 aa18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 RRN3Q9NYV6 651 aa18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 ADAM22Q9P0K1 906 aa18.96■□□□□ 0.63
SNRPA1-203ENST00000540017 FRYLO94915 3013 aa18.95■□□□□ 0.62
SNRPA1-203ENST00000540017 WASH3PC4AMC7 463 aa18.95■□□□□ 0.62
SNRPA1-203ENST00000540017 GFRA3O60609 400 aa18.95■□□□□ 0.62
SNRPA1-203ENST00000540017 ADCY5O95622 1261 aa18.95■□□□□ 0.62
SNRPA1-203ENST00000540017 SLC2A3P11169 496 aa18.95■□□□□ 0.62
SNRPA1-203ENST00000540017 SKILP12757 684 aa18.95■□□□□ 0.62
SNRPA1-203ENST00000540017 TNFAIP3P21580 790 aa18.95■□□□□ 0.62
SNRPA1-203ENST00000540017 PRKCIP41743 596 aa18.95■□□□□ 0.62
SNRPA1-203ENST00000540017 CXCR3P49682 368 aa18.95■□□□□ 0.62
SNRPA1-203ENST00000540017 ARCQ7LC44 396 aa18.95■□□□□ 0.62
SNRPA1-203ENST00000540017 ANKS1BQ7Z6G8 1248 aa18.95■□□□□ 0.62
SNRPA1-203ENST00000540017 KIAA0907Q7Z7F0 614 aaPredicted RBP18.95■□□□□ 0.62
SNRPA1-203ENST00000540017 CHSY1Q86X52 802 aa18.95■□□□□ 0.62
SNRPA1-203ENST00000540017 DNAAF5Q86Y56 855 aa18.95■□□□□ 0.62
SNRPA1-203ENST00000540017 HJURPQ8NCD3 748 aaPredicted RBP18.95■□□□□ 0.62
SNRPA1-203ENST00000540017 SORCS1Q8WY21 1168 aa18.95■□□□□ 0.62
SNRPA1-203ENST00000540017 LMLNQ96KR4 655 aa18.95■□□□□ 0.62
SNRPA1-203ENST00000540017 IRX2Q9BZI1 471 aaPredicted RBP18.95■□□□□ 0.62
SNRPA1-203ENST00000540017 SEMA4AQ9H3S1 761 aa18.95■□□□□ 0.62
SNRPA1-203ENST00000540017 TMPRSS4Q9NRS4 437 aa18.95■□□□□ 0.62
SNRPA1-203ENST00000540017 ABCB8Q9NUT2 735 aa18.95■□□□□ 0.62
SNRPA1-203ENST00000540017 STAP1Q9ULZ2 295 aa18.95■□□□□ 0.62
SNRPA1-203ENST00000540017 EML5Q05BV3 1969 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 A0A1W2PQJ5 194 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 TCRBV5S1A1TA0A578 114 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 PAGE1O75459 146 aa18.94■□□□□ 0.62
SNRPA1-203ENST00000540017 APBB3O95704 486 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms