RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 FAXCQ5TGI0 409 aa15.01□□□□□ -0.01
CDCA3-207ENST00000538862 MTHFD1LQ6UB35 978 aa15.01□□□□□ -0.01
CDCA3-207ENST00000538862 CDHR3Q6ZTQ4 885 aa15.01□□□□□ -0.01
CDCA3-207ENST00000538862 ACOT1Q86TX2 421 aa15.01□□□□□ -0.01
CDCA3-207ENST00000538862 UNC93AQ86WB7 457 aa15.01□□□□□ -0.01
CDCA3-207ENST00000538862 SCUBE3Q8IX30 993 aa15.01□□□□□ -0.01
CDCA3-207ENST00000538862 NLRP7Q8WX94 980 aa15.01□□□□□ -0.01
CDCA3-207ENST00000538862 CENPIQ92674 756 aaPredicted RBP15.01□□□□□ -0.01
CDCA3-207ENST00000538862 PPP1R16BQ96T49 567 aa15.01□□□□□ -0.01
CDCA3-207ENST00000538862 MRPL45Q9BRJ2 306 aaKnown RBP15.01□□□□□ -0.01
CDCA3-207ENST00000538862 C11orf84Q9BUA3 381 aaPredicted RBP15.01□□□□□ -0.01
CDCA3-207ENST00000538862 GCOM2Q9BZD3 368 aaPredicted RBP15.01□□□□□ -0.01
CDCA3-207ENST00000538862 MMADHCQ9H3L0 296 aaPredicted RBP15.01□□□□□ -0.01
CDCA3-207ENST00000538862 XAB2Q9HCS7 855 aaKnown RBP15.01□□□□□ -0.01
CDCA3-207ENST00000538862 SMYD2Q9NRG4 433 aa15.01□□□□□ -0.01
CDCA3-207ENST00000538862 SIRPGQ9P1W8 387 aa15.01□□□□□ -0.01
CDCA3-207ENST00000538862 SCN10AQ9Y5Y9 1956 aa15.01□□□□□ -0.01
CDCA3-207ENST00000538862 A6NJR5 290 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 BIRC5O15392 142 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 GYG2O15488 501 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 ATP5BP06576 529 aaKnown RBP15□□□□□ -0.01
CDCA3-207ENST00000538862 CNTFP26441 200 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 CRHR1P34998 444 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 GCKP35557 465 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 MRPS5P82675 430 aaKnown RBP15□□□□□ -0.01
CDCA3-207ENST00000538862 ITGA7Q13683 1181 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 PPP6R3Q5H9R7 873 aaPredicted RBP15□□□□□ -0.01
CDCA3-207ENST00000538862 ARHGAP17Q68EM7 881 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 TIFABQ6ZNK6 161 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 ANKRD33Q7Z3H0 272 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 ZNF410Q86VK4 478 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 TEX9Q8N6V9 391 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 PPTC7Q8NI37 304 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 EMID1Q96A84 441 aaPredicted RBP15□□□□□ -0.01
CDCA3-207ENST00000538862 E2F7Q96AV8 911 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 FBXO6Q9NRD1 293 aaPredicted RBP15□□□□□ -0.01
CDCA3-207ENST00000538862 PCDHA11Q9Y5I1 949 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 KAT6AQ92794 2004 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 SCN1AP35498 2009 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 TRIP11Q15643 1979 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 ENTPD5O75356 428 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 METTL18O95568 372 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 MMP3P08254 477 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 ESRRAP11474 423 aaPredicted RBP15□□□□□ -0.01
CDCA3-207ENST00000538862 SEMA5AQ13591 1074 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 DBN1Q16643 649 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 ZNF534Q76KX8 674 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 SLC26A9Q7LBE3 791 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 APBB1IPQ7Z5R6 666 aaPredicted RBP15□□□□□ -0.01
CDCA3-207ENST00000538862 LRRC52Q8N7C0 313 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 TTC8Q8TAM2 541 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 KCNV2Q8TDN2 545 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 QKIQ96PU8 341 aaKnown RBP eCLIP15□□□□□ -0.01
CDCA3-207ENST00000538862 PRDM16Q9HAZ2 1276 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 SNX9Q9Y5X1 595 aa15□□□□□ -0.01
CDCA3-207ENST00000538862 RALGAPA2Q2PPJ7 1873 aa14.99□□□□□ -0.01
CDCA3-207ENST00000538862 FAM237BA0A1B0GVD1 139 aa14.99□□□□□ -0.01
CDCA3-207ENST00000538862 FCHO1O14526 889 aa14.99□□□□□ -0.01
CDCA3-207ENST00000538862 GABBR2O75899 941 aa14.99□□□□□ -0.01
CDCA3-207ENST00000538862 CABYRO75952 493 aa14.99□□□□□ -0.01
CDCA3-207ENST00000538862 RPL34P49207 117 aaKnown RBP14.99□□□□□ -0.01
CDCA3-207ENST00000538862 SARNPP82979 210 aaKnown RBP14.99□□□□□ -0.01
CDCA3-207ENST00000538862 TMPRSS15P98073 1019 aa14.99□□□□□ -0.01
CDCA3-207ENST00000538862 OCRLQ01968 901 aa14.99□□□□□ -0.01
CDCA3-207ENST00000538862 BST1Q10588 318 aa14.99□□□□□ -0.01
CDCA3-207ENST00000538862 SLC10A2Q12908 348 aaPredicted RBP14.99□□□□□ -0.01
CDCA3-207ENST00000538862 STXBP5Q5T5C0 1151 aa14.99□□□□□ -0.01
CDCA3-207ENST00000538862 NUDCD3Q8IVD9 361 aa14.99□□□□□ -0.01
CDCA3-207ENST00000538862 FAM126BQ8IXS8 530 aa14.99□□□□□ -0.01
CDCA3-207ENST00000538862 ARMC2Q8NEN0 867 aa14.99□□□□□ -0.01
CDCA3-207ENST00000538862 BADQ92934 168 aa14.99□□□□□ -0.01
CDCA3-207ENST00000538862 TMEM39AQ9NV64 488 aa14.99□□□□□ -0.01
CDCA3-207ENST00000538862 TAS2R1Q9NYW7 299 aa14.99□□□□□ -0.01
CDCA3-207ENST00000538862 MOCS1Q9NZB8 636 aa14.99□□□□□ -0.01
CDCA3-207ENST00000538862 STOML1Q9UBI4 398 aa14.99□□□□□ -0.01
CDCA3-207ENST00000538862 MAD1L1Q9Y6D9 718 aa14.99□□□□□ -0.01
CDCA3-207ENST00000538862 MAP3K6O95382 1288 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 CSH1P0DML2 217 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 CSH2P0DML3 217 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 MLNP12872 115 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 PTDSS1P48651 473 aaKnown RBP14.98□□□□□ -0.01
CDCA3-207ENST00000538862 GBE1Q04446 702 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 ZBTB6Q15916 424 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 KCNT2Q6UVM3 1135 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 ARHGAP24Q8N264 748 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 RNF217Q8TC41 542 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 MCUR1Q96AQ8 359 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 TOX2Q96NM4 488 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 LBHD1Q9BQE6 289 aaPredicted RBP14.98□□□□□ -0.01
CDCA3-207ENST00000538862 C16orf70Q9BSU1 422 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 MTG1Q9BT17 334 aaPredicted RBP14.98□□□□□ -0.01
CDCA3-207ENST00000538862 B3GNT5Q9BYG0 378 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 UBE2OQ9C0C9 1292 aaKnown RBP14.98□□□□□ -0.01
CDCA3-207ENST00000538862 TRPV6Q9H1D0 765 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 DHX35Q9H5Z1 703 aaKnown RBP14.98□□□□□ -0.01
CDCA3-207ENST00000538862 FAM49BQ9NUQ9 324 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.98□□□□□ -0.01
CDCA3-207ENST00000538862 HACD1B0YJ81 288 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 UGT1A9O60656 530 aa14.98□□□□□ -0.01
CDCA3-207ENST00000538862 SNNO75324 88 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms