RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 MBTPS1Q14703 1052 aa11.11□□□□□ -0.63
CLIP1-210ENST00000538120 PAN2Q504Q3 1202 aaKnown RBP11.11□□□□□ -0.63
CLIP1-210ENST00000538120 DCAF6Q58WW2 860 aa11.11□□□□□ -0.63
CLIP1-210ENST00000538120 FAM47EQ6ZV65 393 aa11.11□□□□□ -0.63
CLIP1-210ENST00000538120 CENPUQ71F23 418 aa11.11□□□□□ -0.63
CLIP1-210ENST00000538120 BZW1Q7L1Q6 419 aaKnown RBP11.11□□□□□ -0.63
CLIP1-210ENST00000538120 ASRGL1Q7L266 308 aa11.11□□□□□ -0.63
CLIP1-210ENST00000538120 BHLHA9Q7RTU4 235 aa11.11□□□□□ -0.63
CLIP1-210ENST00000538120 RNF180Q86T96 592 aa11.11□□□□□ -0.63
CLIP1-210ENST00000538120 FAM131BQ86XD5 332 aa11.11□□□□□ -0.63
CLIP1-210ENST00000538120 ECHDC2Q86YB7 292 aa11.11□□□□□ -0.63
CLIP1-210ENST00000538120 SRRM1Q8IYB3 904 aaKnown RBP11.11□□□□□ -0.63
CLIP1-210ENST00000538120 ZBED8Q8IZ13 594 aa11.11□□□□□ -0.63
CLIP1-210ENST00000538120 FAM149B1Q96BN6 582 aa11.11□□□□□ -0.63
CLIP1-210ENST00000538120 SPACA7Q96KW9 195 aa11.11□□□□□ -0.63
CLIP1-210ENST00000538120 TTC25Q96NG3 672 aa11.11□□□□□ -0.63
CLIP1-210ENST00000538120 PKMYT1Q99640 499 aa11.11□□□□□ -0.63
CLIP1-210ENST00000538120 CFHR5Q9BXR6 569 aa11.11□□□□□ -0.63
CLIP1-210ENST00000538120 RHOBTB2Q9BYZ6 727 aa11.11□□□□□ -0.63
CLIP1-210ENST00000538120 ULBP1Q9BZM6 244 aa11.11□□□□□ -0.63
CLIP1-210ENST00000538120 TRPV6Q9H1D0 765 aa11.11□□□□□ -0.63
CLIP1-210ENST00000538120 ETNK2Q9NVF9 386 aa11.11□□□□□ -0.63
CLIP1-210ENST00000538120 ARL2BPQ9Y2Y0 163 aa11.11□□□□□ -0.63
CLIP1-210ENST00000538120 MFHAS1Q9Y4C4 1052 aa11.11□□□□□ -0.63
CLIP1-210ENST00000538120 hCG_2014768A0A024R1R8 64 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 F8W810 466 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 CYP11A1P05108 521 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 CKBP12277 381 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 FOXN2P32314 431 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 STX2P32856 288 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 DAOAP59103 153 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 KCNJ11Q14654 390 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 HIF1AQ16665 826 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 DEFB115Q30KQ5 88 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 FAM171BQ6P995 826 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 CTU1Q7Z7A3 348 aaKnown RBP11.1□□□□□ -0.63
CLIP1-210ENST00000538120 ANKMY2Q8IV38 441 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 MAB21L3Q8N8X9 362 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 MAML1Q92585 1016 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 UTP4Q969X6 686 aaKnown RBP11.1□□□□□ -0.63
CLIP1-210ENST00000538120 PGBD4Q96DM1 585 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 PHACTR1Q9C0D0 580 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 RXFP1Q9HBX9 757 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 TMLHEQ9NVH6 421 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 NOP53Q9NZM5 478 aaKnown RBP11.1□□□□□ -0.63
CLIP1-210ENST00000538120 XPO7Q9UIA9 1087 aaKnown RBP11.1□□□□□ -0.63
CLIP1-210ENST00000538120 NOD1Q9Y239 953 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 PTCH2Q9Y6C5 1203 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 YJEFN3A6XGL0 299 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 E7ENQ6 273 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 M0QZQ0 153 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 INPPL1O15357 1258 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 KCNN4O15554 427 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 B4GALT3O60512 393 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 TRPA1O75762 1119 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 B3GAT3O94766 335 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 ITGB1P05556 798 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 GOT1P17174 413 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 AMPD1P23109 780 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 RNASELQ05823 741 aaKnown RBP11.1□□□□□ -0.63
CLIP1-210ENST00000538120 GRIK3Q13003 919 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 NCBP2-AS2Q69YL0 99 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 SIX6OS1Q8N1H7 587 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 LINC01599Q8WXQ3 324 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 CSNK1G1Q9HCP0 422 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 INPP5FQ9Y2H2 1132 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 SQORQ9Y6N5 450 aa11.1□□□□□ -0.63
CLIP1-210ENST00000538120 ODC1P11926 461 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 ARL4CP56559 192 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 BASP1P80723 227 aaKnown RBP11.09□□□□□ -0.63
CLIP1-210ENST00000538120 TUSC3Q13454 348 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 LRRTM3Q86VH5 581 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 SLC43A3Q8NBI5 491 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 HASPINQ8TF76 798 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 RSPH1Q8WYR4 309 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 MYLPFQ96A32 169 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 TMEM209Q96SK2 561 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 PAIP2Q9BPZ3 127 aaKnown RBP11.09□□□□□ -0.63
CLIP1-210ENST00000538120 ACBD6Q9BR61 282 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 POPDC2Q9HBU9 364 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 RGS18Q9NS28 235 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 PIGVQ9NUD9 493 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 C9IYK1 514 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 I6L893 689 aaPredicted RBP11.09□□□□□ -0.63
CLIP1-210ENST00000538120 M0QYT0 321 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 CDH16O75309 829 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 FBXO21O94952 628 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 UPP2O95045 317 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 AMHP03971 560 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 USP17L7P0C7H9 530 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 TAC1P20366 129 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 CCND1P24385 295 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 PCSK1P29120 753 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 CBLBQ13191 982 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 MTM1Q13496 603 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 CAPN12Q6ZSI9 719 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 TDRPQ86YL5 185 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 PSTKQ8IV42 348 aaKnown RBP11.09□□□□□ -0.63
CLIP1-210ENST00000538120 IGDCC3Q8IVU1 814 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 AGGF1Q8N302 714 aaeCLIP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms