RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 COPAP53621 1224 aa11.78□□□□□ -0.52
CLCF1-202ENST00000533438 STARD3Q14849 445 aa11.78□□□□□ -0.52
CLCF1-202ENST00000533438 IQCB1Q15051 598 aa11.78□□□□□ -0.52
CLCF1-202ENST00000533438 MEA1Q16626 185 aa11.78□□□□□ -0.52
CLCF1-202ENST00000533438 PSAPL1Q6NUJ1 521 aa11.78□□□□□ -0.52
CLCF1-202ENST00000533438 DEFB119Q8N690 84 aa11.78□□□□□ -0.52
CLCF1-202ENST00000533438 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.78□□□□□ -0.52
CLCF1-202ENST00000533438 CEP76Q8TAP6 659 aa11.78□□□□□ -0.52
CLCF1-202ENST00000533438 ENOX1Q8TC92 643 aaKnown RBP11.78□□□□□ -0.52
CLCF1-202ENST00000533438 ZNF419Q96HQ0 510 aaPredicted RBP11.78□□□□□ -0.52
CLCF1-202ENST00000533438 MED15Q96RN5 788 aa11.78□□□□□ -0.52
CLCF1-202ENST00000533438 INTS2Q9H0H0 1204 aaKnown RBP11.78□□□□□ -0.52
CLCF1-202ENST00000533438 CBX8Q9HC52 389 aa11.78□□□□□ -0.52
CLCF1-202ENST00000533438 CAPN10Q9HC96 672 aa11.78□□□□□ -0.52
CLCF1-202ENST00000533438 USP36Q9P275 1121 aaKnown RBP11.78□□□□□ -0.52
CLCF1-202ENST00000533438 DSPP15924 2871 aaKnown RBP11.77□□□□□ -0.52
CLCF1-202ENST00000533438 ATRXP46100 2492 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 NYNRINQ9P2P1 1898 aaKnown RBP11.77□□□□□ -0.53
CLCF1-202ENST00000533438 TMEM8BA6NDV4 472 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 TIMM44O43615 452 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 FBXO21O94952 628 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 FYNP06241 537 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 SERPINF2P08697 491 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 C7P10643 843 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 NCAM1P13591 858 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 CEACAM1P13688 526 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 CSRP1P21291 193 aaKnown RBP11.77□□□□□ -0.53
CLCF1-202ENST00000533438 MYL5Q02045 173 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 RING1Q06587 406 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 E2F5Q15329 346 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 DUOXA1Q1HG43 343 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 FAM133BQ5BKY9 247 aaKnown RBP11.77□□□□□ -0.53
CLCF1-202ENST00000533438 MPP7Q5T2T1 576 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 PIK3R6Q5UE93 754 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 KIAA1324Q6UXG2 1013 aaKnown RBP11.77□□□□□ -0.53
CLCF1-202ENST00000533438 UNC45BQ8IWX7 931 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 DHX40Q8IX18 779 aaKnown RBP11.77□□□□□ -0.53
CLCF1-202ENST00000533438 WFIKKN2Q8TEU8 576 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 SORCS1Q8WY21 1168 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 TMA16Q96EY4 203 aaKnown RBP11.77□□□□□ -0.53
CLCF1-202ENST00000533438 HSPA12BQ96MM6 686 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 IRX2Q9BZI1 471 aaPredicted RBP11.77□□□□□ -0.53
CLCF1-202ENST00000533438 CIPCQ9C0C6 399 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 PRDM16Q9HAZ2 1276 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 ITM2CQ9NQX7 267 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 WSB2Q9NYS7 404 aaPredicted RBP11.77□□□□□ -0.53
CLCF1-202ENST00000533438 BAHCC1Q9P281 2608 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 ITPR1Q14643 2758 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 AKAP13Q12802 2813 aa11.77□□□□□ -0.53
CLCF1-202ENST00000533438 FAM208BQ5VWN6 2430 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 SMTNL1A8MU46 457 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 KCNJ18B7U540 433 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 GIPC1O14908 333 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 IRAK2O43187 625 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 ACSL4O60488 711 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 FGFR1OPO95684 399 aaKnown RBP11.76□□□□□ -0.53
CLCF1-202ENST00000533438 IGLV3-19P01714 112 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 PRKCHP24723 683 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 CD6P30203 668 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 SLC6A4P31645 630 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 NOVA1P51513 510 aaKnown RBP11.76□□□□□ -0.53
CLCF1-202ENST00000533438 NNTQ13423 1086 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 NCAPHQ15003 741 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 SH3PXD2AQ5TCZ1 1133 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 NUGGCQ68CJ6 796 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 NADSYN1Q6IA69 706 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 TRIM65Q6PJ69 517 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 BEND5Q7L4P6 421 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 RABEPKQ7Z6M1 372 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 ADIPOR2Q86V24 386 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 TMPRSS6Q8IU80 811 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 AOPEPQ8N6M6 819 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 WFDC5Q8TCV5 224 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 DQX1Q8TE96 717 aaKnown RBP11.76□□□□□ -0.53
CLCF1-202ENST00000533438 STK32AQ8WU08 396 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 GOLGA1Q92805 767 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 FOXJ1Q92949 421 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 AZIN2Q96A70 460 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 FCRL2Q96LA5 508 aaPredicted RBP11.76□□□□□ -0.53
CLCF1-202ENST00000533438 SLC4A5Q9BY07 1137 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 MIS12Q9H081 205 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 RBSNQ9H1K0 784 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 TMEM245Q9H330 911 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 UBE2TQ9NPD8 197 aaPredicted RBP11.76□□□□□ -0.53
CLCF1-202ENST00000533438 FSCN3Q9NQT6 498 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 ABCB8Q9NUT2 735 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 CYTH4Q9UIA0 394 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 SLC6A14Q9UN76 642 aa11.76□□□□□ -0.53
CLCF1-202ENST00000533438 CACNA1EQ15878 2313 aa11.75□□□□□ -0.53
CLCF1-202ENST00000533438 GOLGA6L7A0A1B0GV03 622 aa11.75□□□□□ -0.53
CLCF1-202ENST00000533438 FAM221BA6H8Z2 402 aa11.75□□□□□ -0.53
CLCF1-202ENST00000533438 BECN2A8MW95 431 aa11.75□□□□□ -0.53
CLCF1-202ENST00000533438 SART1O43290 800 aaKnown RBP11.75□□□□□ -0.53
CLCF1-202ENST00000533438 SYNCRIPO60506 623 aaKnown RBP11.75□□□□□ -0.53
CLCF1-202ENST00000533438 TBL1XO60907 577 aa11.75□□□□□ -0.53
CLCF1-202ENST00000533438 NDUFS2O75306 463 aa11.75□□□□□ -0.53
CLCF1-202ENST00000533438 CFIP05156 583 aa11.75□□□□□ -0.53
CLCF1-202ENST00000533438 EPHX1P07099 455 aa11.75□□□□□ -0.53
CLCF1-202ENST00000533438 PABPC1P11940 636 aaKnown RBP11.75□□□□□ -0.53
CLCF1-202ENST00000533438 ACADSBP45954 432 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms