RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 SPRED3Q2MJR0 410 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 STXBP5Q5T5C0 1151 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 TANGO2Q6ICL3 276 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 CAVIN1Q6NZI2 390 aaKnown RBP6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 DENND5BQ6ZUT9 1274 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 PAQR9Q6ZVX9 377 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 TMEM150AQ86TG1 271 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 IRF2BP1Q8IU81 584 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 ARID3BQ8IVW6 561 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 SULF2Q8IWU5 870 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 YAF2Q8IY57 180 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 CPA6Q8N4T0 437 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 C12orf29Q8N999 325 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 TMEM102Q8N9M5 508 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 LMO3Q8TAP4 145 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 WHAMMQ8TF30 809 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 MRPS31Q92665 395 aaKnown RBP6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 HPS1Q92902 700 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 TRIM63Q969Q1 353 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 ELSPBP1Q96BH3 223 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 CYFIP2Q96F07 1278 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 ASIC4Q96FT7 647 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 TMEM176AQ96HP8 235 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 CNTNAP3BQ96NU0 1288 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 KCNK16Q96T55 309 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 HNRNPABQ99729 332 aaKnown RBP6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 LRFN3Q9BTN0 628 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 SLC46A2Q9BY10 475 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 CNTNAP3Q9BZ76 1288 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 INTS2Q9H0H0 1204 aaKnown RBP6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 RSPH9Q9H1X1 276 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 TRPV4Q9HBA0 871 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 CBX8Q9HC52 389 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 TRIM39Q9HCM9 518 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 DMAP1Q9NPF5 467 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 SLC2A4RGQ9NR83 387 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 TMEM30AQ9NV96 361 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 ANO10Q9NW15 660 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 WNT16Q9UBV4 365 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 NDOR1Q9UHB4 597 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 DMTF1Q9Y222 760 aa6.09□□□□□ -1.43
HMGB1P42-201ENST00000532126 TRAV19A0A0A6YYK7 116 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 DYTNA2CJ06 578 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 ANKRD34BA5PLL1 514 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 HEPACAM2A8MVW5 462 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 KCNJ18B7U540 433 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 NEMP1O14524 444 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 MMP20O60882 483 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 BEST1O76090 585 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 RTN3O95197 1032 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 PGRP06401 933 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 MYBL2P10244 700 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 CD19P15391 556 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 PSMC3P17980 439 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 EEF1GP26641 437 aaKnown RBP6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 YWHAQP27348 245 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 ARNTP27540 789 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 SERPINB3P29508 390 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 PPP3CCP48454 512 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 PDE6CP51160 858 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 RAD23BP54727 409 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 MAP3K7CLP57077 242 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 SLC8A3P57103 927 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 PFKPQ01813 784 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 TAF10Q12962 218 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 KCNJ12Q14500 433 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 GRM3Q14832 879 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 PDCD2Q16342 344 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 MAN2A1Q16706 1144 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 VWA3BQ502W6 1294 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 HSP90AA4PQ58FG1 418 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 C6orf118Q5T5N4 469 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 ARHGAP17Q68EM7 881 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 TXNDC8Q6A555 127 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 TMEM270Q6UE05 265 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 VITQ6UXI7 678 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 GBP6Q6ZN66 633 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 HFE2Q6ZVN8 426 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 RRAGAQ7L523 313 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 NLRC3Q7RTR2 1065 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 BMP8AQ7Z5Y6 402 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 MON1AQ86VX9 555 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 KIF18BQ86Y91 864 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 MYLK4Q86YV6 388 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 SUGP1Q8IWZ8 645 aaKnown RBP6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 CMTM8Q8IZV2 173 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 NUP93Q8N1F7 819 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 CELF5Q8N6W0 485 aaKnown RBP6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 MAB21L3Q8N8X9 362 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 SLC4A11Q8NBS3 891 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 PDZD8Q8NEN9 1154 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 ENOX1Q8TC92 643 aaKnown RBP6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 COG1Q8WTW3 980 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 DEPDC1BQ8WUY9 529 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 GAL3ST3Q96A11 431 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 JAKMIP2Q96AA8 810 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 FAM81BQ96LP2 452 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 SLITRK1Q96PX8 696 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 SMOQ99835 787 aa6.08□□□□□ -1.44
HMGB1P42-201ENST00000532126 TUBGCP2Q9BSJ2 902 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms