RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 CYFIP2Q96F07 1278 aa20.73■□□□□ 0.91
HIPK3-205ENST00000531504 DNAI2Q9GZS0 605 aa20.73■□□□□ 0.91
HIPK3-205ENST00000531504 NCKAP1Q9Y2A7 1128 aa20.73■□□□□ 0.91
HIPK3-205ENST00000531504 TLE3Q04726 772 aa20.72■□□□□ 0.91
HIPK3-205ENST00000531504 SFSWAPQ12872 951 aaKnown RBP20.72■□□□□ 0.91
HIPK3-205ENST00000531504 ILKQ13418 452 aa20.72■□□□□ 0.91
HIPK3-205ENST00000531504 ZNF776Q68DI1 518 aaPredicted RBP20.72■□□□□ 0.91
HIPK3-205ENST00000531504 RSRC2Q7L4I2 434 aaKnown RBP20.72■□□□□ 0.91
HIPK3-205ENST00000531504 ARHGAP18Q8N392 663 aa20.72■□□□□ 0.91
HIPK3-205ENST00000531504 TAF4BQ92750 862 aa20.72■□□□□ 0.91
HIPK3-205ENST00000531504 ORAI3Q9BRQ5 295 aa20.72■□□□□ 0.91
HIPK3-205ENST00000531504 MARCH2Q9P0N8 246 aa20.72■□□□□ 0.91
HIPK3-205ENST00000531504 TFIP11Q9UBB9 837 aaKnown RBP20.72■□□□□ 0.91
HIPK3-205ENST00000531504 COL6A6A6NMZ7 2263 aa20.72■□□□□ 0.91
HIPK3-205ENST00000531504 A0A1W2PPC4 97 aa20.71■□□□□ 0.91
HIPK3-205ENST00000531504 CBX4O00257 560 aa20.71■□□□□ 0.91
HIPK3-205ENST00000531504 BRINP1O60477 761 aa20.71■□□□□ 0.91
HIPK3-205ENST00000531504 C4BPAP04003 597 aaKnown RBP20.71■□□□□ 0.91
HIPK3-205ENST00000531504 RPN1P04843 607 aaKnown RBP20.71■□□□□ 0.91
HIPK3-205ENST00000531504 IGHV4-34P06331 123 aa20.71■□□□□ 0.91
HIPK3-205ENST00000531504 ARRB1P49407 418 aaPredicted RBP20.71■□□□□ 0.91
HIPK3-205ENST00000531504 ZNF445P59923 1031 aa20.71■□□□□ 0.91
HIPK3-205ENST00000531504 CLDN10P78369 228 aa20.71■□□□□ 0.91
HIPK3-205ENST00000531504 CEBPZQ03701 1054 aaKnown RBP20.71■□□□□ 0.91
HIPK3-205ENST00000531504 CCDC173Q0VFZ6 552 aa20.71■□□□□ 0.91
HIPK3-205ENST00000531504 MPPE1Q53F39 396 aa20.71■□□□□ 0.91
HIPK3-205ENST00000531504 FAM217AQ8IXS0 508 aa20.71■□□□□ 0.91
HIPK3-205ENST00000531504 EID2Q8N6I1 236 aa20.71■□□□□ 0.91
HIPK3-205ENST00000531504 ZNF366Q8N895 744 aa20.71■□□□□ 0.91
HIPK3-205ENST00000531504 SAP25Q8TEE9 199 aa20.71■□□□□ 0.91
HIPK3-205ENST00000531504 PARD3BQ8TEW8 1205 aa20.71■□□□□ 0.91
HIPK3-205ENST00000531504 CYB5D2Q8WUJ1 264 aa20.71■□□□□ 0.91
HIPK3-205ENST00000531504 ELMO3Q96BJ8 720 aa20.71■□□□□ 0.91
HIPK3-205ENST00000531504 SLC6A18Q96N87 628 aa20.71■□□□□ 0.91
HIPK3-205ENST00000531504 CUEDC2Q9H467 287 aa20.71■□□□□ 0.91
HIPK3-205ENST00000531504 PRSS16Q9NQE7 514 aa20.71■□□□□ 0.91
HIPK3-205ENST00000531504 KBTBD4Q9NVX7 518 aa20.71■□□□□ 0.91
HIPK3-205ENST00000531504 SCML1Q9UN30 329 aa20.71■□□□□ 0.91
HIPK3-205ENST00000531504 MORC2Q9Y6X9 1032 aaPredicted RBP20.71■□□□□ 0.91
HIPK3-205ENST00000531504 LRRIQ3A6PVS8 624 aaPredicted RBP20.7■□□□□ 0.9
HIPK3-205ENST00000531504 KIF20AO95235 890 aa20.7■□□□□ 0.9
HIPK3-205ENST00000531504 VNN1O95497 513 aa20.7■□□□□ 0.9
HIPK3-205ENST00000531504 HOXD9P28356 352 aaPredicted RBP20.7■□□□□ 0.9
HIPK3-205ENST00000531504 USP30Q70CQ3 517 aa20.7■□□□□ 0.9
HIPK3-205ENST00000531504 CHST9Q7L1S5 443 aa20.7■□□□□ 0.9
HIPK3-205ENST00000531504 SPACA3Q8IXA5 215 aa20.7■□□□□ 0.9
HIPK3-205ENST00000531504 AHI1Q8N157 1196 aa20.7■□□□□ 0.9
HIPK3-205ENST00000531504 CACTIN-AS1Q8N1I8 211 aa20.7■□□□□ 0.9
HIPK3-205ENST00000531504 GOLGA5Q8TBA6 731 aa20.7■□□□□ 0.9
HIPK3-205ENST00000531504 GANCQ8TET4 914 aa20.7■□□□□ 0.9
HIPK3-205ENST00000531504 PLD4Q96BZ4 506 aa20.7■□□□□ 0.9
HIPK3-205ENST00000531504 WBP1Q96G27 269 aa20.7■□□□□ 0.9
HIPK3-205ENST00000531504 LGMNQ99538 433 aa20.7■□□□□ 0.9
HIPK3-205ENST00000531504 NT5C1AQ9BXI3 368 aa20.7■□□□□ 0.9
HIPK3-205ENST00000531504 GDF3Q9NR23 364 aa20.7■□□□□ 0.9
HIPK3-205ENST00000531504 USP3Q9Y6I4 520 aa20.7■□□□□ 0.9
HIPK3-205ENST00000531504 SLC12A8A0AV02 714 aa20.69■□□□□ 0.9
HIPK3-205ENST00000531504 FAM47DPA6NHR8 397 aa20.69■□□□□ 0.9
HIPK3-205ENST00000531504 ATP5BP06576 529 aaKnown RBP20.69■□□□□ 0.9
HIPK3-205ENST00000531504 HLA-FP30511 346 aa20.69■□□□□ 0.9
HIPK3-205ENST00000531504 ASPAP45381 313 aa20.69■□□□□ 0.9
HIPK3-205ENST00000531504 RHDQ02161 417 aa20.69■□□□□ 0.9
HIPK3-205ENST00000531504 INCA1Q0VD86 236 aa20.69■□□□□ 0.9
HIPK3-205ENST00000531504 TBC1D25Q3MII6 688 aa20.69■□□□□ 0.9
HIPK3-205ENST00000531504 PRAMEF14Q5SWL7 426 aa20.69■□□□□ 0.9
HIPK3-205ENST00000531504 PCSK4Q6UW60 755 aa20.69■□□□□ 0.9
HIPK3-205ENST00000531504 PLEKHO2Q8TD55 490 aa20.69■□□□□ 0.9
HIPK3-205ENST00000531504 TSC1Q92574 1164 aa20.69■□□□□ 0.9
HIPK3-205ENST00000531504 AASDHPPTQ9NRN7 309 aa20.69■□□□□ 0.9
HIPK3-205ENST00000531504 SUN2Q9UH99 717 aa20.69■□□□□ 0.9
HIPK3-205ENST00000531504 CLCA2Q9UQC9 943 aa20.69■□□□□ 0.9
HIPK3-205ENST00000531504 DLDP09622 509 aaKnown RBP20.68■□□□□ 0.9
HIPK3-205ENST00000531504 GLDCP23378 1020 aa20.68■□□□□ 0.9
HIPK3-205ENST00000531504 CD38P28907 300 aa20.68■□□□□ 0.9
HIPK3-205ENST00000531504 EPHA8P29322 1005 aaPredicted RBP20.68■□□□□ 0.9
HIPK3-205ENST00000531504 HARS2P49590 506 aaKnown RBP20.68■□□□□ 0.9
HIPK3-205ENST00000531504 UCNP55089 124 aa20.68■□□□□ 0.9
HIPK3-205ENST00000531504 ZACNQ401N2 412 aa20.68■□□□□ 0.9
HIPK3-205ENST00000531504 BROXQ5VW32 411 aa20.68■□□□□ 0.9
HIPK3-205ENST00000531504 FAM173BQ6P4H8 233 aa20.68■□□□□ 0.9
HIPK3-205ENST00000531504 CNNM4Q6P4Q7 775 aa20.68■□□□□ 0.9
HIPK3-205ENST00000531504 OXR1Q8N573 874 aa20.68■□□□□ 0.9
HIPK3-205ENST00000531504 ZNF396Q96N95 335 aaPredicted RBP20.68■□□□□ 0.9
HIPK3-205ENST00000531504 ARID3AQ99856 593 aa20.68■□□□□ 0.9
HIPK3-205ENST00000531504 DUSP16Q9BY84 665 aa20.68■□□□□ 0.9
HIPK3-205ENST00000531504 IMPG2Q9BZV3 1241 aa20.68■□□□□ 0.9
HIPK3-205ENST00000531504 PABPC3Q9H361 631 aaKnown RBP20.68■□□□□ 0.9
HIPK3-205ENST00000531504 CLMPQ9H6B4 373 aa20.68■□□□□ 0.9
HIPK3-205ENST00000531504 ABCB8Q9NUT2 735 aa20.68■□□□□ 0.9
HIPK3-205ENST00000531504 GGA2Q9UJY4 613 aa20.68■□□□□ 0.9
HIPK3-205ENST00000531504 MGAQ8IWI9 3026 aa20.67■□□□□ 0.9
HIPK3-205ENST00000531504 LRRC72A6NJI9 287 aa20.67■□□□□ 0.9
HIPK3-205ENST00000531504 RNASEH1O60930 286 aaKnown RBP20.67■□□□□ 0.9
HIPK3-205ENST00000531504 ASS1P00966 412 aaKnown RBP20.67■□□□□ 0.9
HIPK3-205ENST00000531504 PABPC1P11940 636 aaKnown RBP20.67■□□□□ 0.9
HIPK3-205ENST00000531504 PIK3CAP42336 1068 aa20.67■□□□□ 0.9
HIPK3-205ENST00000531504 TMPRSS3P57727 454 aa20.67■□□□□ 0.9
HIPK3-205ENST00000531504 KCNH2Q12809 1159 aa20.67■□□□□ 0.9
HIPK3-205ENST00000531504 SHBQ15464 509 aa20.67■□□□□ 0.9
HIPK3-205ENST00000531504 KNOP1Q1ED39 458 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms