RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 PAQR9Q6ZVX9 377 aa17.73■□□□□ 0.43
BRCA2-204ENST00000530893 PAXIP1Q6ZW49 1069 aaPredicted RBP17.73■□□□□ 0.43
BRCA2-204ENST00000530893 TMEM86AQ8N2M4 240 aa17.73■□□□□ 0.43
BRCA2-204ENST00000530893 C2orf69Q8N8R5 385 aa17.73■□□□□ 0.43
BRCA2-204ENST00000530893 ARRDC4Q8NCT1 418 aa17.73■□□□□ 0.43
BRCA2-204ENST00000530893 SH3TC2Q8TF17 1288 aa17.73■□□□□ 0.43
BRCA2-204ENST00000530893 IGSF9Q9P2J2 1179 aa17.73■□□□□ 0.43
BRCA2-204ENST00000530893 TRIP12Q14669 1992 aaPredicted RBP17.73■□□□□ 0.43
BRCA2-204ENST00000530893 HMX2A2RU54 273 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 A8MUI8 341 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 C9IYK1 514 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 PTGESO14684 152 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 NCAM2O15394 837 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 MYL3P08590 195 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 GRIA1P42261 906 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 LHX1P48742 406 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 GJA9P57773 515 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 DEUP1Q05D60 604 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 AP1B1Q10567 949 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 SCAPQ12770 1279 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 DPYSQ14117 519 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 WASHC2DQ5SRD0 308 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 NDUFAF2Q8N183 169 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 SLC13A1Q9BZW2 595 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 UGT1A9O60656 530 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 ANP32DO95626 131 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 HCAR3P49019 387 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 ZNF135P52742 658 aaPredicted RBP17.72■□□□□ 0.43
BRCA2-204ENST00000530893 ZBTB16Q05516 673 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 NIPAL4Q0D2K0 466 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 BMPR2Q13873 1038 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 RFX8Q6ZV50 586 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 NUDCD3Q8IVD9 361 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.72■□□□□ 0.43
BRCA2-204ENST00000530893 ARMC2Q8NEN0 867 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 MED10Q9BTT4 135 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 UGT1A7Q9HAW7 530 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 UGT1A10Q9HAW8 530 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 UGT1A8Q9HAW9 530 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 CNGB3Q9NQW8 809 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 RRN3Q9NYV6 651 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 L3MBTL1Q9Y468 752 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 MFHAS1Q9Y4C4 1052 aa17.72■□□□□ 0.43
BRCA2-204ENST00000530893 EEF2KO00418 725 aaKnown RBP17.71■□□□□ 0.43
BRCA2-204ENST00000530893 CALB2P22676 271 aa17.71■□□□□ 0.43
BRCA2-204ENST00000530893 SERPINB3P29508 390 aa17.71■□□□□ 0.43
BRCA2-204ENST00000530893 TKTL1P51854 596 aa17.71■□□□□ 0.43
BRCA2-204ENST00000530893 TMPRSS15P98073 1019 aa17.71■□□□□ 0.43
BRCA2-204ENST00000530893 FAM182AQ5T1J6 154 aa17.71■□□□□ 0.43
BRCA2-204ENST00000530893 MROH9Q5TGP6 573 aa17.71■□□□□ 0.43
BRCA2-204ENST00000530893 WSCD1Q658N2 575 aa17.71■□□□□ 0.43
BRCA2-204ENST00000530893 CASC4Q6P4E1 433 aa17.71■□□□□ 0.43
BRCA2-204ENST00000530893 LONP2Q86WA8 852 aa17.71■□□□□ 0.43
BRCA2-204ENST00000530893 PDCD7Q8N8D1 485 aaKnown RBP17.71■□□□□ 0.43
BRCA2-204ENST00000530893 ATP2A3Q93084 1043 aa17.71■□□□□ 0.43
BRCA2-204ENST00000530893 PGAP3Q96FM1 320 aaPredicted RBP17.71■□□□□ 0.43
BRCA2-204ENST00000530893 NSL1Q96IY1 281 aa17.71■□□□□ 0.43
BRCA2-204ENST00000530893 ANKRD27Q96NW4 1050 aa17.71■□□□□ 0.43
BRCA2-204ENST00000530893 BRD8Q9H0E9 1235 aa17.71■□□□□ 0.43
BRCA2-204ENST00000530893 TSPYL2Q9H2G4 693 aaPredicted RBP17.71■□□□□ 0.43
BRCA2-204ENST00000530893 C15orf41Q9Y2V0 281 aa17.71■□□□□ 0.43
BRCA2-204ENST00000530893 WDR27A2RRH5 827 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 E7ENQ6 273 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 CLDN5O00501 218 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 DCLK1O15075 740 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 CREB3O43889 395 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 BEST1O76090 585 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 BPGMP07738 259 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 MYL2P10916 166 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 ADRA1BP35368 520 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 CCNG1P51959 295 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 OCRLQ01968 901 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 BST1Q10588 318 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 MDH1BQ5I0G3 518 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 INTS6LQ5JSJ4 861 aaKnown RBP17.71■□□□□ 0.42
BRCA2-204ENST00000530893 CCDC33Q8N5R6 958 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 STKLD1Q8NE28 680 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 FAM13CQ8NE31 585 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 CFAP61Q8NHU2 1237 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 GIMAP7Q8NHV1 300 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 PPP1R13LQ8WUF5 828 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 PTCD3Q96EY7 689 aaKnown RBP17.71■□□□□ 0.42
BRCA2-204ENST00000530893 SIKE1Q9BRV8 207 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 BTBD10Q9BSF8 475 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 PRDM12Q9H4Q4 367 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 PCMTD2Q9NV79 361 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 FLRT1Q9NZU1 646 aa17.71■□□□□ 0.42
BRCA2-204ENST00000530893 CAPN9O14815 690 aa17.7■□□□□ 0.42
BRCA2-204ENST00000530893 SNNO75324 88 aaPredicted RBP17.7■□□□□ 0.42
BRCA2-204ENST00000530893 WASHC5Q12768 1159 aa17.7■□□□□ 0.42
BRCA2-204ENST00000530893 IFRD2Q12894 506 aaPredicted RBP17.7■□□□□ 0.42
BRCA2-204ENST00000530893 TEX44Q53QW1 395 aa17.7■□□□□ 0.42
BRCA2-204ENST00000530893 SYPL2Q5VXT5 272 aa17.7■□□□□ 0.42
BRCA2-204ENST00000530893 CCNYQ8ND76 341 aa17.7■□□□□ 0.42
BRCA2-204ENST00000530893 ARNTL2Q8WYA1 636 aa17.7■□□□□ 0.42
BRCA2-204ENST00000530893 NDRG1Q92597 394 aaKnown RBP17.7■□□□□ 0.42
BRCA2-204ENST00000530893 SENP8Q96LD8 212 aa17.7■□□□□ 0.42
BRCA2-204ENST00000530893 WWP1Q9H0M0 922 aa17.7■□□□□ 0.42
BRCA2-204ENST00000530893 KRT82Q9NSB4 513 aa17.7■□□□□ 0.42
BRCA2-204ENST00000530893 PIGVQ9NUD9 493 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms