RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 NLRC5Q86WI3 1866 aa15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 SYNJ2BP-COX16A0A087WUM0 186 aa15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 AP3B1O00203 1094 aa15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 ENPP3O14638 875 aa15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 FAM155BO75949 473 aa15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 IGLV3-25P01717 112 aa15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 YY1P25490 414 aa15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 OR1G1P47890 313 aa15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 YWHAGP61981 247 aaKnown RBP eCLIP15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 PITX1P78337 314 aaPredicted RBP15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 PAN2Q504Q3 1202 aaKnown RBP15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 HP1BP3Q5SSJ5 553 aaPredicted RBP15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 ACBD5Q5T8D3 534 aaPredicted RBP15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 LRRC8BQ6P9F7 803 aa15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 SRLQ86TD4 932 aa15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 CAND1Q86VP6 1230 aaKnown RBP15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 ZNF280BQ86YH2 543 aa15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 GRAMD1AQ96CP6 724 aa15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 MAGEB18Q96M61 343 aa15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 PAFAH2Q99487 392 aa15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 PLCD4Q9BRC7 762 aa15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 TMEM30AQ9NV96 361 aa15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 ARHGEF38Q9NXL2 777 aa15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 COX16Q9P0S2 106 aa15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 SAMD15Q9P1V8 674 aa15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 ZC3H7BQ9UGR2 993 aaKnown RBP15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 ZNF180Q9UJW8 692 aa15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 TRHDEQ9UKU6 1024 aa15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 CHMP2BQ9UQN3 213 aa15.23■□□□□ 0.03
ECHDC1-220ENST00000528402 GOLGA6L7A0A1B0GV03 622 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 ERI2A8K979 691 aaKnown RBP15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 TNFRSF10BO14763 440 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 PSMD3O43242 534 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 MFSD11O43934 449 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 ALDH2P05091 517 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 PRKCHP24723 683 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 GAD2Q05329 585 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 PPIDQ08752 370 aaKnown RBP15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 AP1B1Q10567 949 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 EIF4EBP2Q13542 120 aaPredicted RBP15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 SPARCL1Q14515 664 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 PPP2R5DQ14738 602 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 PLEKHG4Q58EX7 1191 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 PIGWQ7Z7B1 504 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 MON1AQ86VX9 555 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 LZTR1Q8N653 840 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 COLGALT1Q8NBJ5 622 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 DQX1Q8TE96 717 aaKnown RBP15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 HASPINQ8TF76 798 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 SLC44A1Q8WWI5 657 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 LINC01599Q8WXQ3 324 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 RNF34Q969K3 372 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 HDAC11Q96DB2 347 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 P2RY11Q96G91 374 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 SEC16BQ96JE7 1060 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 EBNA1BP2Q99848 306 aaKnown RBP15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 TMEM175Q9BSA9 504 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 MRPL9Q9BYD2 267 aaKnown RBP15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 TKTL2Q9H0I9 626 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 PRDM12Q9H4Q4 367 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 DONSONQ9NYP3 566 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 OR12D3Q9UGF7 316 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 RRP15Q9Y3B9 282 aaKnown RBP15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 PCDHB5Q9Y5E4 795 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 FAM169AQ9Y6X4 670 aa15.22■□□□□ 0.03
ECHDC1-220ENST00000528402 TCRBV9S1A1TA0A576 114 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 H7C4K7 107 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 FGF10O15520 208 aaPredicted RBP15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 ZWINTO95229 277 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 METTL18O95568 372 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 CPP00450 1065 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 ITGB1P05556 798 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 INHBAP08476 426 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 VIMP08670 466 aaKnown RBP15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 SLC2A3P11169 496 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 IBSPP21815 317 aaPredicted RBP15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 CCR1P32246 355 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 SLC5A3P53794 718 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 NRG1Q02297 640 aaPredicted RBP15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 IFRD2Q12894 506 aaPredicted RBP15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 MTA1Q13330 715 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 MRPL58Q14197 206 aaKnown RBP15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 ITIH4Q14624 930 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 PKN2Q16513 984 aaKnown RBP15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 ITPRIPL1Q6GPH6 555 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 ZNF449Q6P9G9 518 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 SLC26A11Q86WA9 606 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 LRRC49Q8IUZ0 686 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 FAM126BQ8IXS8 530 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 NUP93Q8N1F7 819 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 TAB3Q8N5C8 712 aaPredicted RBP15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 CCNYQ8ND76 341 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 DCAKDQ8WVC6 231 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 CABS1Q96KC9 395 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 PPP1R2P1Q96PQ5 205 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 WDR83Q9BRX9 315 aaKnown RBP15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 MAGEB5Q9BZ81 275 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 SMOC2Q9H3U7 446 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 FNIP2Q9P278 1114 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 LRFN2Q9ULH4 789 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms