RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 GDF9O60383 454 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 SYNCRIPO60506 623 aaKnown RBP16.13■□□□□ 0.17
CAPN1-213ENST00000527897 TRUB2O95900 331 aaKnown RBP16.13■□□□□ 0.17
CAPN1-213ENST00000527897 ERBB2P04626 1255 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 CYP11B1P15538 503 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 NDUFV2P19404 249 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 HLA-FP30511 346 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 IL12RB1P42701 662 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 SNX16P57768 344 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 CDK17Q00537 523 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 BYSLQ13895 437 aaKnown RBP16.13■□□□□ 0.17
CAPN1-213ENST00000527897 ZNF234Q14588 700 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 PUM1Q14671 1186 aaKnown RBP eCLIP16.13■□□□□ 0.17
CAPN1-213ENST00000527897 STARD3Q14849 445 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 PTPN20Q4JDL3 420 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 EFHC1Q5JVL4 640 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 PMS2CLQ68D20 193 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 NADSYN1Q6IA69 706 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 CHST9Q7L1S5 443 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 LPCAT2Q7L5N7 544 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 TMEFF1Q8IYR6 380 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 DEFB106AQ8N104 65 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 CFAP52Q8N1V2 620 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 CARNMT1Q8N4J0 409 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 DEFB119Q8N690 84 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 TMEM35BQ8NCS4 154 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 OLIG1Q8TAK6 271 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 CYB5D2Q8WUJ1 264 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 NUCKS1Q9H1E3 243 aaKnown RBP16.13■□□□□ 0.17
CAPN1-213ENST00000527897 XPO7Q9UIA9 1087 aaKnown RBP16.13■□□□□ 0.17
CAPN1-213ENST00000527897 GGA2Q9UJY4 613 aa16.13■□□□□ 0.17
CAPN1-213ENST00000527897 NUP205Q92621 2012 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 F8VZ95 297 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 GFRA2O00451 464 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 IRAK2O43187 625 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 HSF2BPO75031 334 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 GFPT2O94808 682 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 COPB1P53618 953 aaKnown RBP16.12■□□□□ 0.17
CAPN1-213ENST00000527897 RNASE9P60153 205 aaKnown RBP16.12■□□□□ 0.17
CAPN1-213ENST00000527897 POLR2FP61218 127 aaKnown RBP16.12■□□□□ 0.17
CAPN1-213ENST00000527897 RPS24P62847 133 aaKnown RBP16.12■□□□□ 0.17
CAPN1-213ENST00000527897 TYRO3Q06418 890 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 NNTQ13423 1086 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 MAP7D1Q3KQU3 841 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 FNDC3BQ53EP0 1204 aaKnown RBP16.12■□□□□ 0.17
CAPN1-213ENST00000527897 RAP1GAP2Q684P5 730 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 TMEM215Q68D42 235 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 TCEAL6Q6IPX3 200 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 SERPINA13PQ6UXR4 307 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 BEND5Q7L4P6 421 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 DGLUCYQ7Z3D6 616 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 CYP2U1Q7Z449 544 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 CHSY1Q86X52 802 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 CACUL1Q86Y37 369 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 MFN1Q8IWA4 741 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 CCDC117Q8IWD4 279 aaPredicted RBP16.12■□□□□ 0.17
CAPN1-213ENST00000527897 LGI2Q8N0V4 545 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 AOPEPQ8N6M6 819 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 HJURPQ8NCD3 748 aaPredicted RBP16.12■□□□□ 0.17
CAPN1-213ENST00000527897 WFDC5Q8TCV5 224 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 TCEAL3Q969E4 200 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 MYEOVQ96EZ4 313 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 SLC39A13Q96H72 371 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 PRICKLE1Q96MT3 831 aaPredicted RBP16.12■□□□□ 0.17
CAPN1-213ENST00000527897 NAA15Q9BXJ9 866 aaKnown RBP16.12■□□□□ 0.17
CAPN1-213ENST00000527897 STK33Q9BYT3 514 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 NLRC4Q9NPP4 1024 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 DDIT4Q9NX09 232 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 TMEM63CQ9P1W3 806 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 THAP10Q9P2Z0 257 aaPredicted RBP16.12■□□□□ 0.17
CAPN1-213ENST00000527897 MBD1Q9UIS9 605 aaPredicted RBP16.12■□□□□ 0.17
CAPN1-213ENST00000527897 CYP8B1Q9UNU6 501 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 PCDHGA5Q9Y5G8 931 aa16.12■□□□□ 0.17
CAPN1-213ENST00000527897 BCLAF3A2AJT9 711 aaKnown RBP16.11■□□□□ 0.17
CAPN1-213ENST00000527897 CAVIN2O95810 425 aa16.11■□□□□ 0.17
CAPN1-213ENST00000527897 EPHX1P07099 455 aa16.11■□□□□ 0.17
CAPN1-213ENST00000527897 ZNF806P0C7X5 589 aa16.11■□□□□ 0.17
CAPN1-213ENST00000527897 PABPC1P11940 636 aaKnown RBP16.11■□□□□ 0.17
CAPN1-213ENST00000527897 HLA-EP13747 358 aa16.11■□□□□ 0.17
CAPN1-213ENST00000527897 SDHBP21912 280 aa16.11■□□□□ 0.17
CAPN1-213ENST00000527897 PRKCHP24723 683 aa16.11■□□□□ 0.17
CAPN1-213ENST00000527897 SLC6A3Q01959 620 aa16.11■□□□□ 0.17
CAPN1-213ENST00000527897 RPL6Q02878 288 aaKnown RBP16.11■□□□□ 0.17
CAPN1-213ENST00000527897 NME3Q13232 169 aa16.11■□□□□ 0.17
CAPN1-213ENST00000527897 EIF4HQ15056 248 aaKnown RBP16.11■□□□□ 0.17
CAPN1-213ENST00000527897 FUT11Q495W5 492 aa16.11■□□□□ 0.17
CAPN1-213ENST00000527897 CAVIN1Q6NZI2 390 aaKnown RBP16.11■□□□□ 0.17
CAPN1-213ENST00000527897 OLFML1Q6UWY5 402 aa16.11■□□□□ 0.17
CAPN1-213ENST00000527897 NOP9Q86U38 636 aaKnown RBP16.11■□□□□ 0.17
CAPN1-213ENST00000527897 AHI1Q8N157 1196 aa16.11■□□□□ 0.17
CAPN1-213ENST00000527897 ZNF366Q8N895 744 aa16.11■□□□□ 0.17
CAPN1-213ENST00000527897 ATP6V0D2Q8N8Y2 350 aa16.11■□□□□ 0.17
CAPN1-213ENST00000527897 WFIKKN2Q8TEU8 576 aa16.11■□□□□ 0.17
CAPN1-213ENST00000527897 PIGKQ92643 395 aa16.11■□□□□ 0.17
CAPN1-213ENST00000527897 AZIN2Q96A70 460 aa16.11■□□□□ 0.17
CAPN1-213ENST00000527897 SPAG5Q96R06 1193 aa16.11■□□□□ 0.17
CAPN1-213ENST00000527897 GANQ9H2C0 597 aa16.11■□□□□ 0.17
CAPN1-213ENST00000527897 VPS45Q9NRW7 570 aa16.11■□□□□ 0.17
CAPN1-213ENST00000527897 SLC12A6Q9UHW9 1150 aa16.11■□□□□ 0.17
CAPN1-213ENST00000527897 PLA2G4CQ9UP65 541 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms