RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 CHST9Q7L1S5 443 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 TMEM110Q86TL2 294 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 MRGPRX1Q96LB2 322 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 GBP4Q96PP9 640 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 PDCL3Q9H2J4 239 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 PRDM16Q9HAZ2 1276 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 POPDC2Q9HBU9 364 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 SIX2Q9NPC8 291 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 SAMSN1Q9NSI8 373 aaKnown RBP20.03■□□□□ 0.8
CAPN1-211ENST00000527739 GGA2Q9UJY4 613 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 AJAP1Q9UKB5 411 aaPredicted RBP20.03■□□□□ 0.8
CAPN1-211ENST00000527739 PLA2G4CQ9UP65 541 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 TLR6Q9Y2C9 796 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 CNOT1A5YKK6 2376 aaKnown RBP20.03■□□□□ 0.8
CAPN1-211ENST00000527739 ATXN2Q99700 1313 aaKnown RBP20.02■□□□□ 0.8
CAPN1-211ENST00000527739 SYNJ2BP-COX16A0A087WUM0 186 aa20.02■□□□□ 0.8
CAPN1-211ENST00000527739 IGHV1OR15-9A0A0B4J2B8 117 aa20.02■□□□□ 0.8
CAPN1-211ENST00000527739 TYW5A2RUC4 315 aaKnown RBP20.02■□□□□ 0.8
CAPN1-211ENST00000527739 FOXN3O00409 490 aaPredicted RBP20.02■□□□□ 0.8
CAPN1-211ENST00000527739 PNMA6AP0CW24 399 aaPredicted RBP20.02■□□□□ 0.8
CAPN1-211ENST00000527739 HLA-FP30511 346 aa20.02■□□□□ 0.8
CAPN1-211ENST00000527739 SLC6A4P31645 630 aa20.02■□□□□ 0.8
CAPN1-211ENST00000527739 YWHAZP63104 245 aaKnown RBP20.02■□□□□ 0.8
CAPN1-211ENST00000527739 RAPGEF1Q13905 1077 aa20.02■□□□□ 0.8
CAPN1-211ENST00000527739 TAF5Q15542 800 aa20.02■□□□□ 0.8
CAPN1-211ENST00000527739 FAM133BQ5BKY9 247 aaKnown RBP20.02■□□□□ 0.8
CAPN1-211ENST00000527739 TMEM215Q68D42 235 aa20.02■□□□□ 0.8
CAPN1-211ENST00000527739 TAC4Q86UU9 113 aa20.02■□□□□ 0.8
CAPN1-211ENST00000527739 CCDC117Q8IWD4 279 aaPredicted RBP20.02■□□□□ 0.8
CAPN1-211ENST00000527739 WFIKKN2Q8TEU8 576 aa20.02■□□□□ 0.8
CAPN1-211ENST00000527739 CYB5D2Q8WUJ1 264 aa20.02■□□□□ 0.8
CAPN1-211ENST00000527739 DDX1Q92499 740 aaKnown RBP20.02■□□□□ 0.8
CAPN1-211ENST00000527739 PPP1R13BQ96KQ4 1090 aa20.02■□□□□ 0.8
CAPN1-211ENST00000527739 FCRL2Q96LA5 508 aaPredicted RBP20.02■□□□□ 0.8
CAPN1-211ENST00000527739 NOX5Q96PH1 765 aa20.02■□□□□ 0.8
CAPN1-211ENST00000527739 SYNCQ9H7C4 482 aa20.02■□□□□ 0.8
CAPN1-211ENST00000527739 CD248Q9HCU0 757 aa20.02■□□□□ 0.8
CAPN1-211ENST00000527739 COX16Q9P0S2 106 aa20.02■□□□□ 0.8
CAPN1-211ENST00000527739 TJP2Q9UDY2 1190 aa20.02■□□□□ 0.8
CAPN1-211ENST00000527739 LAMA1P25391 3075 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 C4orf47A7E2U8 309 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 IRAK2O43187 625 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 APOEP02649 317 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 PABPC1P11940 636 aaKnown RBP20.01■□□□□ 0.79
CAPN1-211ENST00000527739 HLA-EP13747 358 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 ITPKAP23677 461 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 IRX4P78413 519 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 DCAF6Q58WW2 860 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 ZC3H12AQ5D1E8 599 aaKnown RBP20.01■□□□□ 0.79
CAPN1-211ENST00000527739 TRIM61Q5EBN2 209 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 MIIPQ5JXC2 388 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 SPDYCQ5MJ68 293 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 NADSYN1Q6IA69 706 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 OR6B2Q6IFH4 312 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 CLEC17AQ6ZS10 378 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 SLC47A2Q86VL8 602 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 CACUL1Q86Y37 369 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 TMPRSS6Q8IU80 811 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 SYT12Q8IV01 421 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 MFN1Q8IWA4 741 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 ABCA7Q8IZY2 2146 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 CARNMT1Q8N4J0 409 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 RNF34Q969K3 372 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 AZIN2Q96A70 460 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 NUSAP1Q9BXS6 441 aaKnown RBP20.01■□□□□ 0.79
CAPN1-211ENST00000527739 CD93Q9NPY3 652 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 TMEM74BQ9NUR3 256 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 ANGPTL2Q9UKU9 493 aa20.01■□□□□ 0.79
CAPN1-211ENST00000527739 MYO18AQ92614 2054 aaKnown RBP20■□□□□ 0.79
CAPN1-211ENST00000527739 GRAP2O75791 330 aa20■□□□□ 0.79
CAPN1-211ENST00000527739 KCNK5O95279 499 aa20■□□□□ 0.79
CAPN1-211ENST00000527739 TRUB2O95900 331 aaKnown RBP20■□□□□ 0.79
CAPN1-211ENST00000527739 CFIP05156 583 aa20■□□□□ 0.79
CAPN1-211ENST00000527739 ACADMP11310 421 aa20■□□□□ 0.79
CAPN1-211ENST00000527739 POLR2EP19388 210 aaKnown RBP20■□□□□ 0.79
CAPN1-211ENST00000527739 PRKCHP24723 683 aa20■□□□□ 0.79
CAPN1-211ENST00000527739 CDK17Q00537 523 aa20■□□□□ 0.79
CAPN1-211ENST00000527739 ZNF33AQ06730 810 aa20■□□□□ 0.79
CAPN1-211ENST00000527739 MBLAC2Q68D91 279 aa20■□□□□ 0.79
CAPN1-211ENST00000527739 RGL4Q8IZJ4 473 aa20■□□□□ 0.79
CAPN1-211ENST00000527739 AHI1Q8N157 1196 aa20■□□□□ 0.79
CAPN1-211ENST00000527739 CFAP52Q8N1V2 620 aa20■□□□□ 0.79
CAPN1-211ENST00000527739 WDTC1Q8N5D0 677 aa20■□□□□ 0.79
CAPN1-211ENST00000527739 ZNF366Q8N895 744 aa20■□□□□ 0.79
CAPN1-211ENST00000527739 HJURPQ8NCD3 748 aaPredicted RBP20■□□□□ 0.79
CAPN1-211ENST00000527739 C1orf131Q8NDD1 294 aaKnown RBP20■□□□□ 0.79
CAPN1-211ENST00000527739 PRCCQ92733 491 aaPredicted RBP20■□□□□ 0.79
CAPN1-211ENST00000527739 SIPA1Q96FS4 1042 aa20■□□□□ 0.79
CAPN1-211ENST00000527739 CPXM1Q96SM3 734 aa20■□□□□ 0.79
CAPN1-211ENST00000527739 LSM14BQ9BX40 385 aaKnown RBP20■□□□□ 0.79
CAPN1-211ENST00000527739 MKRN2Q9H000 416 aaKnown RBP20■□□□□ 0.79
CAPN1-211ENST00000527739 NUCKS1Q9H1E3 243 aaKnown RBP20■□□□□ 0.79
CAPN1-211ENST00000527739 FAM204AQ9H8W3 233 aa20■□□□□ 0.79
CAPN1-211ENST00000527739 PLCB1Q9NQ66 1216 aa20■□□□□ 0.79
CAPN1-211ENST00000527739 TAB2Q9NYJ8 693 aa20■□□□□ 0.79
CAPN1-211ENST00000527739 SLC12A6Q9UHW9 1150 aa20■□□□□ 0.79
CAPN1-211ENST00000527739 NFE2L3Q9Y4A8 694 aa20■□□□□ 0.79
CAPN1-211ENST00000527739 CEP83Q9Y592 693 aa20■□□□□ 0.79
CAPN1-211ENST00000527739 LNP1A1A4G5 178 aa19.99■□□□□ 0.79
CAPN1-211ENST00000527739 FAM170AA1A519 330 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms