RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 LRRC19Q9H756 370 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 PCYOX1Q9UHG3 505 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 hCG_1818297A0A087WSY0 165 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 SPECC1L-ADORA2AF8WAN1 911 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 CFLARO15519 480 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 TLR5O60602 858 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 RHOBTB1O94844 696 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 CXCL14O95715 111 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 FGFR1P11362 822 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 KRT4P19013 534 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 GJA5P36382 358 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 ELK3P41970 407 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 DPYSL3Q14195 570 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 FUT10Q6P4F1 479 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 C17orf99Q6UX52 265 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 STK32AQ8WU08 396 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 EMID1Q96A84 441 aaPredicted RBP15.48■□□□□ 0.07
USP47-207ENST00000527733 OXCT2Q9BYC2 517 aaPredicted RBP15.48■□□□□ 0.07
USP47-207ENST00000527733 DDX60Q8IY21 1712 aaKnown RBP15.48■□□□□ 0.07
USP47-207ENST00000527733 NRAPQ86VF7 1730 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 ATP5HO75947 161 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 GHRHRQ02643 423 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 PPIGQ13427 754 aaKnown RBP eCLIP15.48■□□□□ 0.079e-6■■□□□ 12.8
USP47-207ENST00000527733 RAP1GAP2Q684P5 730 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 LMNTD2Q8IXW0 634 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 EIF1ADQ8N9N8 165 aaKnown RBP15.48■□□□□ 0.07
USP47-207ENST00000527733 TRIB2Q92519 343 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 MTBPQ96DY7 904 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 PAFAH2Q99487 392 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 SERPINI1Q99574 410 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 LIASO43766 372 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 OR4Q2P0C623 313 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 MYL2P10916 166 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 MAP4P27816 1152 aaKnown RBP15.47■□□□□ 0.07
USP47-207ENST00000527733 E2F5Q15329 346 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 LVRNQ6Q4G3 990 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 FAM167BQ9BTA0 163 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 GDF3Q9NR23 364 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 XIRP1Q702N8 1843 aaKnown RBP15.47■□□□□ 0.07
USP47-207ENST00000527733 CNMDO75829 334 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 TYMPP19971 482 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 FLT3P36888 993 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 MGAT5Q09328 741 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 FAM83EQ2M2I3 478 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 BRMS1LQ5PSV4 323 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 PMF1Q6P1K2 205 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 SLC26A9Q7LBE3 791 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 SPATA21Q7Z572 469 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 ZNF557Q8N988 423 aaPredicted RBP15.47■□□□□ 0.07
USP47-207ENST00000527733 CORO1BQ9BR76 489 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 CYLDQ9NQC7 956 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 RNF186Q9NXI6 227 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 UBA2Q9UBT2 640 aaPredicted RBP15.47■□□□□ 0.07
USP47-207ENST00000527733 SEPT3Q9UH03 358 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 TRAV19A0A0A6YYK7 116 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 CYP1A1P04798 512 aaPredicted RBP15.47■□□□□ 0.07
USP47-207ENST00000527733 WARSP23381 471 aaKnown RBP15.47■□□□□ 0.07
USP47-207ENST00000527733 AIF1P55008 147 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 TRADDQ15628 312 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 HIBCHQ6NVY1 386 aaPredicted RBP15.47■□□□□ 0.07
USP47-207ENST00000527733 AGR3Q8TD06 166 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 EPN3Q9H201 632 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.47■□□□□ 0.07
USP47-207ENST00000527733 NAALADL1Q9UQQ1 740 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 LRP5O75197 1615 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 DNAJC25-GNG10A0A024R161 153 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 A0A0U1RQF3 1178 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 TXNDC9O14530 226 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 CCDC22O60826 627 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 ERCC2P18074 760 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 RFX8Q6ZV50 586 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 TMC3Q7Z5M5 1100 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 SCLYQ96I15 445 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 STYXL1Q9Y6J8 313 aa15.47■□□□□ 0.07
USP47-207ENST00000527733 TIAM2Q8IVF5 1701 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 A0A0A0MRY4 1105 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 NPY2RP49146 381 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 MMRN1Q13201 1228 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 PARP6Q2NL67 630 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 MFN1Q8IWA4 741 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 SPATA13Q96N96 652 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 TACO1Q9BSH4 297 aaKnown RBP15.46■□□□□ 0.07
USP47-207ENST00000527733 ZYG11BQ9C0D3 744 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 IARS2Q9NSE4 1012 aaKnown RBP15.46■□□□□ 0.07
USP47-207ENST00000527733 IRAK4Q9NWZ3 460 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 FAM153AQ9UHL3 310 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 PAPPAQ13219 1627 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 E2F8A0AVK6 867 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 GOT1P17174 413 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 CHKAP35790 457 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 ASPAP45381 313 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 CDK16Q00536 496 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 POU6F1Q14863 301 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 HABP4Q5JVS0 413 aaKnown RBP15.46■□□□□ 0.07
USP47-207ENST00000527733 NPNTQ6UXI9 565 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 LRRC49Q8IUZ0 686 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 RAB42Q8N4Z0 105 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 RNF39Q9H2S5 420 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 PRDM12Q9H4Q4 367 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 IGFLR1Q9H665 355 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms