RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 ARHGEF4Q9NR80 690 aa14.91□□□□□ -0.02
COLCA2-202ENST00000526216 DZANK1Q9NVP4 752 aa14.91□□□□□ -0.02
COLCA2-202ENST00000526216 SMPD4Q9NXE4 827 aa14.91□□□□□ -0.02
COLCA2-202ENST00000526216 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.91□□□□□ -0.02
COLCA2-202ENST00000526216 DPP7Q9UHL4 492 aa14.91□□□□□ -0.02
COLCA2-202ENST00000526216 EFR3BQ9Y2G0 817 aa14.91□□□□□ -0.02
COLCA2-202ENST00000526216 CPQQ9Y646 472 aa14.91□□□□□ -0.02
COLCA2-202ENST00000526216 V9GYY5 206 aaPredicted RBP14.91□□□□□ -0.02
COLCA2-202ENST00000526216 HELZP42694 1942 aaKnown RBP14.9□□□□□ -0.02
COLCA2-202ENST00000526216 TMEM265A0A087WTH1 108 aa14.9□□□□□ -0.02
COLCA2-202ENST00000526216 CREB3O43889 395 aa14.9□□□□□ -0.02
COLCA2-202ENST00000526216 LRIG2O94898 1065 aa14.9□□□□□ -0.02
COLCA2-202ENST00000526216 IRF1P10914 325 aa14.9□□□□□ -0.02
COLCA2-202ENST00000526216 MBL2P11226 248 aaPredicted RBP14.9□□□□□ -0.02
COLCA2-202ENST00000526216 CEBPBP17676 345 aa14.9□□□□□ -0.02
COLCA2-202ENST00000526216 IRAK1P51617 712 aa14.9□□□□□ -0.02
COLCA2-202ENST00000526216 MRPS25P82663 173 aaKnown RBP14.9□□□□□ -0.02
COLCA2-202ENST00000526216 ODF2Q5BJF6 829 aa14.9□□□□□ -0.02
COLCA2-202ENST00000526216 MS4A13Q5J8X5 152 aa14.9□□□□□ -0.02
COLCA2-202ENST00000526216 RARS2Q5T160 578 aaKnown RBP14.9□□□□□ -0.02
COLCA2-202ENST00000526216 SYCE2Q6PIF2 218 aa14.9□□□□□ -0.02
COLCA2-202ENST00000526216 PDZD4Q76G19 769 aaPredicted RBP14.9□□□□□ -0.02
COLCA2-202ENST00000526216 MAP7D3Q8IWC1 876 aa14.9□□□□□ -0.02
COLCA2-202ENST00000526216 MMGT1Q8N4V1 131 aa14.9□□□□□ -0.02
COLCA2-202ENST00000526216 C12orf50Q8NA57 414 aaPredicted RBP14.9□□□□□ -0.02
COLCA2-202ENST00000526216 MYRIPQ8NFW9 859 aa14.9□□□□□ -0.02
COLCA2-202ENST00000526216 RIN3Q8TB24 985 aa14.9□□□□□ -0.02
COLCA2-202ENST00000526216 ITFG1Q8TB96 612 aa14.9□□□□□ -0.02
COLCA2-202ENST00000526216 C1orf54Q8WWF1 131 aa14.9□□□□□ -0.02
COLCA2-202ENST00000526216 SMG7Q92540 1137 aaKnown RBP14.9□□□□□ -0.02
COLCA2-202ENST00000526216 PLD4Q96BZ4 506 aa14.9□□□□□ -0.02
COLCA2-202ENST00000526216 HAUS1Q96CS2 278 aa14.9□□□□□ -0.02
COLCA2-202ENST00000526216 APOL5Q9BWW9 433 aa14.9□□□□□ -0.02
COLCA2-202ENST00000526216 DCLK3Q9C098 648 aa14.9□□□□□ -0.02
COLCA2-202ENST00000526216 DDX47Q9H0S4 455 aaKnown RBP14.9□□□□□ -0.02
COLCA2-202ENST00000526216 RCOR3Q9P2K3 495 aaPredicted RBP14.9□□□□□ -0.02
COLCA2-202ENST00000526216 OR12D3Q9UGF7 316 aa14.9□□□□□ -0.02
COLCA2-202ENST00000526216 MTCH2Q9Y6C9 303 aa14.9□□□□□ -0.02
COLCA2-202ENST00000526216 REV3LO60673 3130 aa14.9□□□□□ -0.02
COLCA2-202ENST00000526216 GOLGA6L7A0A1B0GV03 622 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 H3BRJ5 948 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 EEF2KO00418 725 aaKnown RBP14.89□□□□□ -0.03
COLCA2-202ENST00000526216 DCLK1O15075 740 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 PHF2O75151 1096 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 APOEP02649 317 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 SLC2A3P11169 496 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 HDCP19113 662 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 HOXC13P31276 330 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 CETN2P41208 172 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 MLLT6P55198 1093 aaPredicted RBP14.89□□□□□ -0.03
COLCA2-202ENST00000526216 SLC7A9P82251 487 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 NRG1Q02297 640 aaPredicted RBP14.89□□□□□ -0.03
COLCA2-202ENST00000526216 ADAM15Q13444 863 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 FAM133BQ5BKY9 247 aaKnown RBP14.89□□□□□ -0.03
COLCA2-202ENST00000526216 GPR158Q5T848 1215 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 RAP1GAP2Q684P5 730 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 NCBP2-AS2Q69YL0 99 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 ANKRD54Q6NXT1 300 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 RFX8Q6ZV50 586 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 KLHL7Q8IXQ5 586 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 ATP6V0D2Q8N8Y2 350 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 NETO2Q8NC67 525 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 LRCH3Q96II8 777 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 RPGRIP1Q96KN7 1286 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 ZSWIM3Q96MP5 696 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 GCNAQ96QF7 691 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 KRT12Q99456 494 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 NAP1L3Q99457 506 aaPredicted RBP14.89□□□□□ -0.03
COLCA2-202ENST00000526216 NACA2Q9H009 215 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 SIK2Q9H0K1 926 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 SMG9Q9H0W8 520 aaKnown RBP14.89□□□□□ -0.03
COLCA2-202ENST00000526216 EPC1Q9H2F5 836 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 TMEM51Q9NW97 253 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 LMCD1Q9NZU5 365 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 CLEC1BQ9P126 229 aa14.89□□□□□ -0.03
COLCA2-202ENST00000526216 SAE1Q9UBE0 346 aaPredicted RBP14.89□□□□□ -0.03
COLCA2-202ENST00000526216 E9PAM4 449 aa14.88□□□□□ -0.03
COLCA2-202ENST00000526216 CCDC188H7C350 402 aa14.88□□□□□ -0.03
COLCA2-202ENST00000526216 ACSL4O60488 711 aa14.88□□□□□ -0.03
COLCA2-202ENST00000526216 TJP3O95049 919 aa14.88□□□□□ -0.03
COLCA2-202ENST00000526216 FGF19O95750 216 aa14.88□□□□□ -0.03
COLCA2-202ENST00000526216 CORO1AP31146 461 aaKnown RBP14.88□□□□□ -0.03
COLCA2-202ENST00000526216 SLC6A4P31645 630 aa14.88□□□□□ -0.03
COLCA2-202ENST00000526216 ARL4AP40617 200 aa14.88□□□□□ -0.03
COLCA2-202ENST00000526216 PTGIRP43119 386 aa14.88□□□□□ -0.03
COLCA2-202ENST00000526216 KCNJ1P48048 391 aa14.88□□□□□ -0.03
COLCA2-202ENST00000526216 HCAR3P49019 387 aa14.88□□□□□ -0.03
COLCA2-202ENST00000526216 KPNA1P52294 538 aaPredicted RBP14.88□□□□□ -0.03
COLCA2-202ENST00000526216 TPI1P60174 286 aa14.88□□□□□ -0.03
COLCA2-202ENST00000526216 COG7P83436 770 aa14.88□□□□□ -0.03
COLCA2-202ENST00000526216 OTUD4Q01804 1114 aaKnown RBP14.88□□□□□ -0.03
COLCA2-202ENST00000526216 GBE1Q04446 702 aa14.88□□□□□ -0.03
COLCA2-202ENST00000526216 DLX2Q07687 328 aaPredicted RBP14.88□□□□□ -0.03
COLCA2-202ENST00000526216 SLC10A2Q12908 348 aaPredicted RBP14.88□□□□□ -0.03
COLCA2-202ENST00000526216 AUHQ13825 339 aaKnown RBP14.88□□□□□ -0.03
COLCA2-202ENST00000526216 CLUL1Q15846 466 aa14.88□□□□□ -0.03
COLCA2-202ENST00000526216 TEX35Q5T0J7 233 aa14.88□□□□□ -0.03
COLCA2-202ENST00000526216 NUGGCQ68CJ6 796 aa14.88□□□□□ -0.03
COLCA2-202ENST00000526216 TP53INP2Q8IXH6 220 aa14.88□□□□□ -0.03
COLCA2-202ENST00000526216 LEMD2Q8NC56 503 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms