RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 APC2O95996 2303 aa6.87□□□□□ -1.31
CD44-221ENST00000526000 HELZP42694 1942 aaKnown RBP6.86□□□□□ -1.31
CD44-221ENST00000526000 ACACAQ13085 2346 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 YJEFN3A6XGL0 299 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 E7ENQ6 273 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 GOLGA6L22H0YM25 854 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 FLRT2O43155 660 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 TNFSF14O43557 240 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 TIMM44O43615 452 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 DNTTP04053 509 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 PABPC1P11940 636 aaKnown RBP6.86□□□□□ -1.31
CD44-221ENST00000526000 POLR2EP19388 210 aaKnown RBP6.86□□□□□ -1.31
CD44-221ENST00000526000 HOXD9P28356 352 aaPredicted RBP6.86□□□□□ -1.31
CD44-221ENST00000526000 EIF2S3P41091 472 aaKnown RBP6.86□□□□□ -1.31
CD44-221ENST00000526000 HARS2P49590 506 aaKnown RBP6.86□□□□□ -1.31
CD44-221ENST00000526000 PSEN1P49768 467 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 AFF3P51826 1226 aaKnown RBP6.86□□□□□ -1.31
CD44-221ENST00000526000 C21orf59P57076 290 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 INCA1Q0VD86 236 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 BNIP3Q12983 259 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 CAMK2GQ13555 558 aaPredicted RBP6.86□□□□□ -1.31
CD44-221ENST00000526000 ENPP2Q13822 863 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 TRIP4Q15650 581 aaPredicted RBP6.86□□□□□ -1.31
CD44-221ENST00000526000 BSPRYQ5W0U4 402 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 DBX2Q6ZNG2 339 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 MMS22LQ6ZRQ5 1243 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 GLRX5Q86SX6 157 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 ADIPOR2Q86V24 386 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 SMYD4Q8IYR2 804 aaPredicted RBP6.86□□□□□ -1.31
CD44-221ENST00000526000 CFAP52Q8N1V2 620 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 CARNMT1Q8N4J0 409 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 EID2Q8N6I1 236 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 RBBP8NLQ8NC74 664 aaPredicted RBP6.86□□□□□ -1.31
CD44-221ENST00000526000 MYEOVQ96EZ4 313 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 SLC6A18Q96N87 628 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 GBP4Q96PP9 640 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 NEUROG2Q9H2A3 272 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 CAAP1Q9H8G2 361 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 EBF2Q9HAK2 575 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 MAGEF1Q9HAY2 307 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 AASDHPPTQ9NRN7 309 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 CISHQ9NSE2 258 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 FBXL12Q9NXK8 326 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 CLIC5Q9NZA1 410 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 KIAA1522Q9P206 1035 aaPredicted RBP6.86□□□□□ -1.31
CD44-221ENST00000526000 GGA2Q9UJY4 613 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.86□□□□□ -1.31
CD44-221ENST00000526000 AK5Q9Y6K8 562 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 PCDH15Q96QU1 1955 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 ADAMTS20P59510 1910 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 CEP192Q8TEP8 1941 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 PLXNB3Q9ULL4 1909 aa6.86□□□□□ -1.31
CD44-221ENST00000526000 LAMA1P25391 3075 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 KIAA1549LQ6ZVL6 1849 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 A0A1W2PP55 124 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 A0A1W2PQ27 194 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 A0A1W2PQ64 194 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 TTC34A8MYJ7 566 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 MID1O15344 667 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 SIN3BO75182 1162 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 LDOC1O95751 146 aaPredicted RBP6.85□□□□□ -1.31
CD44-221ENST00000526000 WNT1P04628 370 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 ITGAVP06756 1048 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 ZNF883P0CG24 379 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 PFKFB1P16118 471 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 PTMSP20962 102 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 CD27P26842 260 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 SLC6A4P31645 630 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 PSMC2P35998 433 aaKnown RBP6.85□□□□□ -1.31
CD44-221ENST00000526000 CTSOP43234 321 aaPredicted RBP6.85□□□□□ -1.31
CD44-221ENST00000526000 GRK6P43250 576 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 GALCP54803 685 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 RPS24P62847 133 aaKnown RBP6.85□□□□□ -1.31
CD44-221ENST00000526000 ADIGQ0VDE8 80 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 CAMK2BQ13554 666 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 PTPRNQ16849 979 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 TCERG1LQ5VWI1 586 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 KIAA0895LQ68EN5 471 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 KRT39Q6A163 491 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 NCEH1Q6PIU2 408 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 MMAAQ8IVH4 418 aaKnown RBP6.85□□□□□ -1.31
CD44-221ENST00000526000 ARHGAP18Q8N392 663 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 CPXM2Q8N436 756 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 PDCD7Q8N8D1 485 aaKnown RBP6.85□□□□□ -1.31
CD44-221ENST00000526000 ANKRD52Q8NB46 1076 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 BAHD1Q8TBE0 780 aaPredicted RBP6.85□□□□□ -1.31
CD44-221ENST00000526000 PLD4Q96BZ4 506 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 NAF1Q96HR8 494 aaKnown RBP6.85□□□□□ -1.31
CD44-221ENST00000526000 CNDP2Q96KP4 475 aaKnown RBP6.85□□□□□ -1.31
CD44-221ENST00000526000 RPL10LQ96L21 214 aaKnown RBP6.85□□□□□ -1.31
CD44-221ENST00000526000 SPATA32Q96LK8 384 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 CDK5RAP1Q96SZ6 601 aaKnown RBP6.85□□□□□ -1.31
CD44-221ENST00000526000 OMDQ99983 421 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 SLC2A11Q9BYW1 496 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 MIS12Q9H081 205 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 TMEM245Q9H330 911 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 TMEM8AQ9HCN3 771 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 RAB20Q9NX57 234 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 FTSJ1Q9UET6 329 aa6.85□□□□□ -1.31
CD44-221ENST00000526000 SERGEFQ9UGK8 458 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms