RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 SLC46A2Q9BY10 475 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 LMAN2LQ9H0V9 348 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 ETNK2Q9NVF9 386 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 CFAP97Q9P2B7 532 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 ZNF148Q9UQR1 794 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 KCNU1A8MYU2 1149 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 H3BRJ5 948 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 RGS19P49795 217 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 TUBP50607 506 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 ANKRD20A8PQ5CZ79 823 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 C8orf74Q6P047 294 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 TPGS1Q6ZTW0 290 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 TMC8Q8IU68 726 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 SCML4Q8N228 414 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 ATP6V0D2Q8N8Y2 350 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 CMASQ8NFW8 434 aaPredicted RBP9.67□□□□□ -0.86
SDCBP-212ENST00000523483 P3H4Q92791 437 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 WBP2Q969T9 261 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 CSPG4P5Q96PW8 444 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 GAS2L1Q99501 681 aaPredicted RBP9.67□□□□□ -0.86
SDCBP-212ENST00000523483 CCL26Q9Y258 94 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 TTLL3Q9Y4R7 772 aa9.67□□□□□ -0.86
SDCBP-212ENST00000523483 F5H423 210 aaPredicted RBP9.66□□□□□ -0.86
SDCBP-212ENST00000523483 H7C0C1 242 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 APOL1O14791 398 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 ZDHHC11BP0C7U3 371 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 SLC2A3P11169 496 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 CEBPBP17676 345 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 ATP5OP48047 213 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 OTUD4Q01804 1114 aaKnown RBP9.66□□□□□ -0.86
SDCBP-212ENST00000523483 ADGRE1Q14246 886 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 TRIP4Q15650 581 aaPredicted RBP9.66□□□□□ -0.86
SDCBP-212ENST00000523483 LRRC31Q6UY01 552 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 C14orf80Q86SX3 495 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 PCDH19Q8TAB3 1148 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 ACTL9Q8TC94 416 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 ACTRT1Q8TDG2 376 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 CDK5RAP1Q96SZ6 601 aaKnown RBP9.66□□□□□ -0.86
SDCBP-212ENST00000523483 SFXN1Q9H9B4 322 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 SEPT10Q9P0V9 454 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 HS3ST4Q9Y661 456 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 GLP2RO95838 553 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 PECAM1P16284 738 aaPredicted RBP9.66□□□□□ -0.86
SDCBP-212ENST00000523483 GBP2P32456 591 aaPredicted RBP9.66□□□□□ -0.86
SDCBP-212ENST00000523483 SLC11A2P49281 568 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 GBE1Q04446 702 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 PDK2Q15119 407 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 NUGGCQ68CJ6 796 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 CCDC70Q6NSX1 233 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 CES5AQ6NT32 575 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 RFX8Q6ZV50 586 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 PRUNE1Q86TP1 453 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 ZDHHC14Q8IZN3 488 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 LGI2Q8N0V4 545 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 RNF157Q96PX1 679 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 COMMD8Q9NX08 183 aa9.66□□□□□ -0.86
SDCBP-212ENST00000523483 UQCRHLA0A096LP55 91 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 ESYT3A0FGR9 886 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 DFFAO00273 331 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 OAS1P00973 400 aaKnown RBP9.65□□□□□ -0.86
SDCBP-212ENST00000523483 UQCRHP07919 91 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 HNRNPA1P09651 372 aaKnown RBP eCLIP9.65□□□□□ -0.86
SDCBP-212ENST00000523483 ERCC2P18074 760 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 TUBB2AQ13885 445 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 PPP1R7Q15435 360 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 DPYSL2Q16555 572 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 PIK3R6Q5UE93 754 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 CCDC137Q6PK04 289 aaKnown RBP9.65□□□□□ -0.86
SDCBP-212ENST00000523483 TEKT4Q8WW24 435 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 ZBTB9Q96C00 473 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 ZNF707Q96C28 371 aaPredicted RBP9.65□□□□□ -0.86
SDCBP-212ENST00000523483 ZSWIM3Q96MP5 696 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 TUBB2BQ9BVA1 445 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 MTMR10Q9NXD2 777 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 ZDHHC7Q9NXF8 308 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 MAFFQ9ULX9 164 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 F5H5T6 163 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 STC2O76061 302 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 RPS24P62847 133 aaKnown RBP9.65□□□□□ -0.86
SDCBP-212ENST00000523483 AUHQ13825 339 aaKnown RBP9.65□□□□□ -0.86
SDCBP-212ENST00000523483 TFDP2Q14188 446 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 ELF2Q15723 593 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 LRIT3Q3SXY7 679 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 BRMS1LQ5PSV4 323 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 MSANTD2Q6P1R3 559 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 TMCO3Q6UWJ1 677 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 ARID3BQ8IVW6 561 aaPredicted RBP9.65□□□□□ -0.86
SDCBP-212ENST00000523483 UNC45BQ8IWX7 931 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 TP53INP2Q8IXH6 220 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 PRELID2Q8N945 189 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 SH3RF2Q8TEC5 729 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 DEPDC1BQ8WUY9 529 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 OVCA2Q8WZ82 227 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 BTN2A3PQ96KV6 586 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 TMEM121Q9BTD3 319 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 CEP41Q9BYV8 373 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 ARHGEF4Q9NR80 690 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 RNF14Q9UBS8 474 aa9.65□□□□□ -0.86
SDCBP-212ENST00000523483 LSM7Q9UK45 103 aaKnown RBP9.65□□□□□ -0.86
SDCBP-212ENST00000523483 DNPEPQ9ULA0 475 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms