RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 TNFRSF10BO14763 440 aa27.38■■□□□ 1.97
COL13A1-210ENST00000517713 SPAG6O75602 509 aa27.38■■□□□ 1.97
COL13A1-210ENST00000517713 YWHAGP61981 247 aaKnown RBP eCLIP27.38■■□□□ 1.97
COL13A1-210ENST00000517713 IFRD2Q12894 506 aaPredicted RBP27.38■■□□□ 1.97
COL13A1-210ENST00000517713 SEMA5AQ13591 1074 aa27.38■■□□□ 1.97
COL13A1-210ENST00000517713 QPCTQ16769 361 aa27.38■■□□□ 1.97
COL13A1-210ENST00000517713 ABI1Q8IZP0 508 aa27.38■■□□□ 1.97
COL13A1-210ENST00000517713 DHRS4Q9BTZ2 278 aa27.38■■□□□ 1.97
COL13A1-210ENST00000517713 PRDM12Q9H4Q4 367 aa27.38■■□□□ 1.97
COL13A1-210ENST00000517713 SENP1Q9P0U3 644 aa27.38■■□□□ 1.97
COL13A1-210ENST00000517713 DNM1LO00429 736 aa27.38■■□□□ 1.97
COL13A1-210ENST00000517713 FDFT1P37268 417 aa27.38■■□□□ 1.97
COL13A1-210ENST00000517713 ZNF135P52742 658 aaPredicted RBP27.38■■□□□ 1.97
COL13A1-210ENST00000517713 PLEKHG4Q58EX7 1191 aa27.38■■□□□ 1.97
COL13A1-210ENST00000517713 ADGRD1Q6QNK2 874 aa27.38■■□□□ 1.97
COL13A1-210ENST00000517713 DENND5BQ6ZUT9 1274 aa27.38■■□□□ 1.97
COL13A1-210ENST00000517713 RNF34Q969K3 372 aa27.38■■□□□ 1.97
COL13A1-210ENST00000517713 CYTH2Q99418 400 aa27.38■■□□□ 1.97
COL13A1-210ENST00000517713 PAFAH2Q99487 392 aa27.38■■□□□ 1.97
COL13A1-210ENST00000517713 RAD54BQ9Y620 910 aa27.38■■□□□ 1.97
COL13A1-210ENST00000517713 CEP350Q5VT06 3117 aa27.37■■□□□ 1.97
COL13A1-210ENST00000517713 SCN4BQ8IWT1 228 aa27.37■■□□□ 1.97
COL13A1-210ENST00000517713 TRABDQ9H4I3 376 aa27.37■■□□□ 1.97
COL13A1-210ENST00000517713 ABCC13Q9NSE7 274 aa27.37■■□□□ 1.97
COL13A1-210ENST00000517713 ABI2Q9NYB9 513 aaPredicted RBP27.37■■□□□ 1.97
COL13A1-210ENST00000517713 NKIRAS1Q9NYS0 192 aa27.37■■□□□ 1.97
COL13A1-210ENST00000517713 OR12D3Q9UGF7 316 aa27.37■■□□□ 1.97
COL13A1-210ENST00000517713 TRIM17Q9Y577 477 aa27.37■■□□□ 1.97
COL13A1-210ENST00000517713 RNF103O00237 685 aa27.36■■□□□ 1.97
COL13A1-210ENST00000517713 MSH2P43246 934 aa27.36■■□□□ 1.97
COL13A1-210ENST00000517713 BTBD8Q5XKL5 378 aa27.36■■□□□ 1.97
COL13A1-210ENST00000517713 SPATS2Q86XZ4 545 aaKnown RBP27.36■■□□□ 1.97
COL13A1-210ENST00000517713 COLGALT1Q8NBJ5 622 aa27.36■■□□□ 1.97
COL13A1-210ENST00000517713 LRRC39Q96DD0 335 aa27.36■■□□□ 1.97
COL13A1-210ENST00000517713 EPAS1Q99814 870 aa27.36■■□□□ 1.97
COL13A1-210ENST00000517713 UNC93B1Q9H1C4 597 aa27.36■■□□□ 1.97
COL13A1-210ENST00000517713 BRCA2P51587 3418 aa27.36■■□□□ 1.97
COL13A1-210ENST00000517713 TCRBV9S1A1TA0A576 114 aa27.36■■□□□ 1.97
COL13A1-210ENST00000517713 SYN3O14994 580 aa27.36■■□□□ 1.97
COL13A1-210ENST00000517713 OPHN1O60890 802 aa27.36■■□□□ 1.97
COL13A1-210ENST00000517713 IGLV3-25P01717 112 aa27.36■■□□□ 1.97
COL13A1-210ENST00000517713 TP53INP2Q8IXH6 220 aa27.36■■□□□ 1.97
COL13A1-210ENST00000517713 CFAP36Q96G28 342 aa27.36■■□□□ 1.97
COL13A1-210ENST00000517713 SEPT10Q9P0V9 454 aa27.36■■□□□ 1.97
COL13A1-210ENST00000517713 SNX10Q9Y5X0 201 aa27.36■■□□□ 1.97
COL13A1-210ENST00000517713 PIAS1O75925 651 aa27.35■■□□□ 1.97
COL13A1-210ENST00000517713 MAGEA3P43357 314 aa27.35■■□□□ 1.97
COL13A1-210ENST00000517713 VARS2Q5ST30 1063 aaKnown RBP27.35■■□□□ 1.97
COL13A1-210ENST00000517713 ZNF534Q76KX8 674 aa27.35■■□□□ 1.97
COL13A1-210ENST00000517713 TAX1BP1Q86VP1 789 aa27.35■■□□□ 1.97
COL13A1-210ENST00000517713 SMC6Q96SB8 1091 aa27.35■■□□□ 1.97
COL13A1-210ENST00000517713 MLXIPLQ9NP71 852 aa27.35■■□□□ 1.97
COL13A1-210ENST00000517713 ZC3H7BQ9UGR2 993 aaKnown RBP27.35■■□□□ 1.97
COL13A1-210ENST00000517713 FAM47DPA6NHR8 397 aa27.34■■□□□ 1.97
COL13A1-210ENST00000517713 EIF4EBP2Q13542 120 aaPredicted RBP27.34■■□□□ 1.97
COL13A1-210ENST00000517713 NFE2Q16621 373 aaPredicted RBP27.34■■□□□ 1.97
COL13A1-210ENST00000517713 DCAKDQ8WVC6 231 aa27.34■■□□□ 1.97
COL13A1-210ENST00000517713 SEPT8Q92599 483 aa27.34■■□□□ 1.97
COL13A1-210ENST00000517713 FUBP3Q96I24 572 aaKnown RBP eCLIP27.34■■□□□ 1.97
COL13A1-210ENST00000517713 CASD1Q96PB1 797 aa27.34■■□□□ 1.97
COL13A1-210ENST00000517713 XAB2Q9HCS7 855 aaKnown RBP27.34■■□□□ 1.97
COL13A1-210ENST00000517713 ADAM28Q9UKQ2 775 aa27.34■■□□□ 1.97
COL13A1-210ENST00000517713 ZNF189O75820 626 aaPredicted RBP27.34■■□□□ 1.97
COL13A1-210ENST00000517713 SARNPP82979 210 aaKnown RBP27.34■■□□□ 1.97
COL13A1-210ENST00000517713 WASHC5Q12768 1159 aa27.34■■□□□ 1.97
COL13A1-210ENST00000517713 MICALCLQ6ZW33 695 aa27.34■■□□□ 1.97
COL13A1-210ENST00000517713 SRLQ86TD4 932 aa27.34■■□□□ 1.97
COL13A1-210ENST00000517713 LRRC34Q8IZ02 419 aa27.34■■□□□ 1.97
COL13A1-210ENST00000517713 KIF9Q9HAQ2 790 aa27.34■■□□□ 1.97
COL13A1-210ENST00000517713 GGA2Q9UJY4 613 aa27.34■■□□□ 1.97
COL13A1-210ENST00000517713 LRFN2Q9ULH4 789 aa27.34■■□□□ 1.97
COL13A1-210ENST00000517713 RRP15Q9Y3B9 282 aaKnown RBP27.34■■□□□ 1.97
COL13A1-210ENST00000517713 PITPNM1O00562 1244 aa27.33■■□□□ 1.97
COL13A1-210ENST00000517713 NCAM2O15394 837 aa27.33■■□□□ 1.97
COL13A1-210ENST00000517713 PRPF4O43172 522 aaKnown RBP eCLIP27.33■■□□□ 1.97
COL13A1-210ENST00000517713 STX2P32856 288 aa27.33■■□□□ 1.97
COL13A1-210ENST00000517713 CDK16Q00536 496 aa27.33■■□□□ 1.97
COL13A1-210ENST00000517713 SCD5Q86SK9 330 aa27.33■■□□□ 1.97
COL13A1-210ENST00000517713 OSBPL2Q9H1P3 480 aa27.33■■□□□ 1.97
COL13A1-210ENST00000517713 ARHGEF38Q9NXL2 777 aa27.33■■□□□ 1.97
COL13A1-210ENST00000517713 A0A1W2PPM1 405 aa27.33■■□□□ 1.96
COL13A1-210ENST00000517713 IRAK2O43187 625 aa27.33■■□□□ 1.96
COL13A1-210ENST00000517713 SPAG7O75391 227 aa27.33■■□□□ 1.96
COL13A1-210ENST00000517713 LRIG2O94898 1065 aa27.33■■□□□ 1.96
COL13A1-210ENST00000517713 VIMP08670 466 aaKnown RBP27.33■■□□□ 1.96
COL13A1-210ENST00000517713 EPHB2P29323 1055 aa27.33■■□□□ 1.96
COL13A1-210ENST00000517713 GATMP50440 423 aa27.33■■□□□ 1.96
COL13A1-210ENST00000517713 KBTBD12Q3ZCT8 623 aa27.33■■□□□ 1.96
COL13A1-210ENST00000517713 GKAP1Q5VSY0 366 aaPredicted RBP27.33■■□□□ 1.96
COL13A1-210ENST00000517713 CEP57Q86XR8 500 aa27.33■■□□□ 1.96
COL13A1-210ENST00000517713 GDAP1Q8TB36 358 aa27.33■■□□□ 1.96
COL13A1-210ENST00000517713 CKAP2Q8WWK9 683 aa27.33■■□□□ 1.96
COL13A1-210ENST00000517713 SGSM3Q96HU1 749 aa27.33■■□□□ 1.96
COL13A1-210ENST00000517713 SEC16BQ96JE7 1060 aa27.33■■□□□ 1.96
COL13A1-210ENST00000517713 SIGLEC10Q96LC7 697 aa27.33■■□□□ 1.96
COL13A1-210ENST00000517713 CEP41Q9BYV8 373 aa27.33■■□□□ 1.96
COL13A1-210ENST00000517713 FAM169AQ9Y6X4 670 aa27.33■■□□□ 1.96
COL13A1-210ENST00000517713 F5H423 210 aaPredicted RBP27.32■■□□□ 1.96
COL13A1-210ENST00000517713 CPP00450 1065 aa27.32■■□□□ 1.96
COL13A1-210ENST00000517713 CYP2C18P33260 490 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms