RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 SLC41A1Q8IVJ1 513 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 SCUBE3Q8IX30 993 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 DEFB119Q8N690 84 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 HJURPQ8NCD3 748 aaPredicted RBP18.18■□□□□ 0.5
DDX41-217ENST00000515562 DQX1Q8TE96 717 aaKnown RBP18.18■□□□□ 0.5
DDX41-217ENST00000515562 ZNF606Q8WXB4 792 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 SORCS1Q8WY21 1168 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 PRCCQ92733 491 aaPredicted RBP18.18■□□□□ 0.5
DDX41-217ENST00000515562 SIPA1Q96FS4 1042 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 ZNF419Q96HQ0 510 aaPredicted RBP18.18■□□□□ 0.5
DDX41-217ENST00000515562 CNTNAP3BQ96NU0 1288 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 CRACR2AQ9BSW2 395 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 SLC4A5Q9BY07 1137 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 CNTNAP3Q9BZ76 1288 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 ABCB8Q9NUT2 735 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 SUSD2Q9UGT4 822 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 SLC6A14Q9UN76 642 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 PLA2G4CQ9UP65 541 aa18.18■□□□□ 0.5
DDX41-217ENST00000515562 CAPN9O14815 690 aa18.17■□□□□ 0.5
DDX41-217ENST00000515562 FYNP06241 537 aa18.17■□□□□ 0.5
DDX41-217ENST00000515562 PABPC1P11940 636 aaKnown RBP18.17■□□□□ 0.5
DDX41-217ENST00000515562 CSRP1P21291 193 aaKnown RBP18.17■□□□□ 0.5
DDX41-217ENST00000515562 PMLP29590 882 aa18.17■□□□□ 0.5
DDX41-217ENST00000515562 SGSHP51688 502 aa18.17■□□□□ 0.5
DDX41-217ENST00000515562 GFPT1Q06210 699 aaPredicted RBP18.17■□□□□ 0.5
DDX41-217ENST00000515562 TPD52L1Q16890 204 aaPredicted RBP18.17■□□□□ 0.5
DDX41-217ENST00000515562 EXOC3L4Q17RC7 722 aa18.17■□□□□ 0.5
DDX41-217ENST00000515562 FNDC3BQ53EP0 1204 aaKnown RBP18.17■□□□□ 0.5
DDX41-217ENST00000515562 RFWD3Q6PCD5 774 aa18.17■□□□□ 0.5
DDX41-217ENST00000515562 CHST9Q7L1S5 443 aa18.17■□□□□ 0.5
DDX41-217ENST00000515562 KIAA0907Q7Z7F0 614 aaPredicted RBP18.17■□□□□ 0.5
DDX41-217ENST00000515562 FCRL2Q96LA5 508 aaPredicted RBP18.17■□□□□ 0.5
DDX41-217ENST00000515562 MED15Q96RN5 788 aa18.17■□□□□ 0.5
DDX41-217ENST00000515562 FBRSQ9HAH7 460 aa18.17■□□□□ 0.5
DDX41-217ENST00000515562 CAPN10Q9HC96 672 aa18.17■□□□□ 0.5
DDX41-217ENST00000515562 CD93Q9NPY3 652 aa18.17■□□□□ 0.5
DDX41-217ENST00000515562 ITM2CQ9NQX7 267 aa18.17■□□□□ 0.5
DDX41-217ENST00000515562 ANGPTL2Q9UKU9 493 aa18.17■□□□□ 0.5
DDX41-217ENST00000515562 NFE2L3Q9Y4A8 694 aa18.17■□□□□ 0.5
DDX41-217ENST00000515562 E5RJQ4 531 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 TBL1XO60907 577 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 IGLV3-19P01714 112 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 ATP5BP06576 529 aaKnown RBP18.16■□□□□ 0.5
DDX41-217ENST00000515562 ACADMP11310 421 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 SLC9A1P19634 815 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 OXTRP30559 389 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 SLC6A4P31645 630 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 USP8P40818 1118 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 MAPK8P45983 427 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 MTIF2P46199 727 aaKnown RBP18.16■□□□□ 0.5
DDX41-217ENST00000515562 COPAP53621 1224 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 ATXN3P54252 364 aaPredicted RBP18.16■□□□□ 0.5
DDX41-217ENST00000515562 PDCLQ13371 301 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 UAP1L1Q3KQV9 507 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 WDR45BQ5MNZ6 344 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 SH3PXD2AQ5TCZ1 1133 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 TMEM110Q86TL2 294 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 ADIPOR2Q86V24 386 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 MFN1Q8IWA4 741 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 FAM114A1Q8IWE2 563 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 OR2T3Q8NH03 318 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 SHC3Q92529 594 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 TOE1Q96GM8 510 aaKnown RBP18.16■□□□□ 0.5
DDX41-217ENST00000515562 PRICKLE1Q96MT3 831 aaPredicted RBP18.16■□□□□ 0.5
DDX41-217ENST00000515562 TMEM245Q9H330 911 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 CLSTN2Q9H4D0 955 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 POPDC2Q9HBU9 364 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 NAALADL1Q9UQQ1 740 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 PI4KAP42356 2102 aa18.16■□□□□ 0.5
DDX41-217ENST00000515562 PCDH15Q96QU1 1955 aa18.15■□□□□ 0.5
DDX41-217ENST00000515562 BECN2A8MW95 431 aa18.15■□□□□ 0.5
DDX41-217ENST00000515562 MEI4A8MW99 385 aa18.15■□□□□ 0.5
DDX41-217ENST00000515562 PAPSS1O43252 624 aaPredicted RBP18.15■□□□□ 0.5
DDX41-217ENST00000515562 APOEP02649 317 aa18.15■□□□□ 0.5
DDX41-217ENST00000515562 DLDP09622 509 aaKnown RBP18.15■□□□□ 0.5
DDX41-217ENST00000515562 CEACAM1P13688 526 aa18.15■□□□□ 0.5
DDX41-217ENST00000515562 GNSP15586 552 aa18.15■□□□□ 0.5
DDX41-217ENST00000515562 TPMTP51580 245 aa18.15■□□□□ 0.5
DDX41-217ENST00000515562 SHC2P98077 582 aa18.15■□□□□ 0.5
DDX41-217ENST00000515562 CAMK2GQ13555 558 aaPredicted RBP18.15■□□□□ 0.5
DDX41-217ENST00000515562 ARHGAP44Q17R89 818 aa18.15■□□□□ 0.5
DDX41-217ENST00000515562 MBLAC2Q68D91 279 aa18.15■□□□□ 0.5
DDX41-217ENST00000515562 NADSYN1Q6IA69 706 aa18.15■□□□□ 0.5
DDX41-217ENST00000515562 GJB7Q6PEY0 223 aa18.15■□□□□ 0.5
DDX41-217ENST00000515562 TAC4Q86UU9 113 aa18.15■□□□□ 0.5
DDX41-217ENST00000515562 IRF2BP1Q8IU81 584 aa18.15■□□□□ 0.5
DDX41-217ENST00000515562 CCDC117Q8IWD4 279 aaPredicted RBP18.15■□□□□ 0.5
DDX41-217ENST00000515562 RGL4Q8IZJ4 473 aa18.15■□□□□ 0.5
DDX41-217ENST00000515562 CADM4Q8NFZ8 388 aa18.15■□□□□ 0.5
DDX41-217ENST00000515562 CYB5D2Q8WUJ1 264 aa18.15■□□□□ 0.5
DDX41-217ENST00000515562 SLC39A13Q96H72 371 aa18.15■□□□□ 0.5
DDX41-217ENST00000515562 THAP9Q9H5L6 903 aa18.15■□□□□ 0.5
DDX41-217ENST00000515562 WSB2Q9NYS7 404 aaPredicted RBP18.15■□□□□ 0.5
DDX41-217ENST00000515562 DACH1Q9UI36 760 aa18.15■□□□□ 0.5
DDX41-217ENST00000515562 CYTH4Q9UIA0 394 aa18.15■□□□□ 0.5
DDX41-217ENST00000515562 GOLGA6L7A0A1B0GV03 622 aa18.14■□□□□ 0.49
DDX41-217ENST00000515562 SYPP08247 313 aa18.14■□□□□ 0.49
DDX41-217ENST00000515562 POLR2EP19388 210 aaKnown RBP18.14■□□□□ 0.49
DDX41-217ENST00000515562 PON1P27169 355 aa18.14■□□□□ 0.49
DDX41-217ENST00000515562 YWHAZP63104 245 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms