RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 ALDH1A2O94788 518 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 RHOBTB1O94844 696 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 KLF8O95600 359 aaPredicted RBP10.31□□□□□ -0.76
CCL28-203ENST00000513525 AFPP02771 609 aaKnown RBP10.31□□□□□ -0.76
CCL28-203ENST00000513525 PLA2G4AP47712 749 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 YWHAEP62258 255 aaKnown RBP10.31□□□□□ -0.76
CCL28-203ENST00000513525 KDSRQ06136 332 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 KCNMA1Q12791 1236 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 CUL2Q13617 745 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 ELF2Q15723 593 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 USP39Q53GS9 565 aaKnown RBP10.31□□□□□ -0.76
CCL28-203ENST00000513525 EOGTQ5NDL2 527 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 SCD5Q86SK9 330 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 TXLNBQ8N3L3 684 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 CCDC33Q8N5R6 958 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 ALLCQ8N6M5 410 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 ANKRD52Q8NB46 1076 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 TXNDC5Q8NBS9 432 aaKnown RBP10.31□□□□□ -0.76
CCL28-203ENST00000513525 EHBP1Q8NDI1 1231 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 ACRBPQ8NEB7 543 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 MDGA1Q8NFP4 955 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 OLIG1Q8TAK6 271 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 BAP1Q92560 729 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 PLCB1Q9NQ66 1216 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 FAM207AQ9NSI2 230 aaPredicted RBP10.31□□□□□ -0.76
CCL28-203ENST00000513525 NAGPAQ9UK23 515 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 MYO6Q9UM54 1294 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 STARD13Q9Y3M8 1113 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 DAAM1Q9Y4D1 1078 aa10.31□□□□□ -0.76
CCL28-203ENST00000513525 MUC22E2RYF6 1773 aaPredicted RBP10.31□□□□□ -0.76
CCL28-203ENST00000513525 TP53BP1Q12888 1972 aaPredicted RBP10.3□□□□□ -0.76
CCL28-203ENST00000513525 CACNA1EQ15878 2313 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 ASCC3Q8N3C0 2202 aaKnown RBP10.3□□□□□ -0.76
CCL28-203ENST00000513525 SSU72P8A0A1W2PR75 194 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 SGK1O00141 431 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 ST8SIA5O15466 376 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 ADAM23O75077 832 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 STC2O76061 302 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 RALAP11233 206 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 HNRNPLP14866 589 aaKnown RBP eCLIP10.3□□□□□ -0.76
CCL28-203ENST00000513525 TBXAS1P24557 533 aaPredicted RBP10.3□□□□□ -0.76
CCL28-203ENST00000513525 MPLP40238 635 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 ARHGAP25P42331 645 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 SLC8A3P57103 927 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 KCNH2Q12809 1159 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 ANO4Q32M45 955 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 C10orf120Q5SQS8 335 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 EMC10Q5UCC4 262 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 PMS2CLQ68D20 193 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 ANO7Q6IWH7 933 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 TRMT11Q7Z4G4 463 aaKnown RBP10.3□□□□□ -0.76
CCL28-203ENST00000513525 PIGZQ86VD9 579 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 TTC30AQ86WT1 665 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 ARHGAP18Q8N392 663 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 UBR7Q8N806 425 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 NAT16Q8N8M0 369 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 C12orf50Q8NA57 414 aaPredicted RBP10.3□□□□□ -0.76
CCL28-203ENST00000513525 XPO6Q96QU8 1125 aaKnown RBP10.3□□□□□ -0.76
CCL28-203ENST00000513525 WDR24Q96S15 920 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 LSM14BQ9BX40 385 aaKnown RBP10.3□□□□□ -0.76
CCL28-203ENST00000513525 TPSD1Q9BZJ3 242 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 TSGA10Q9BZW7 698 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 NHEJ1Q9H9Q4 299 aaPredicted RBP10.3□□□□□ -0.76
CCL28-203ENST00000513525 POLMQ9NP87 494 aaPredicted RBP10.3□□□□□ -0.76
CCL28-203ENST00000513525 LZTFL1Q9NQ48 299 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 VPS45Q9NRW7 570 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 WDR35Q9P2L0 1181 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 ZNF510Q9Y2H8 683 aa10.3□□□□□ -0.76
CCL28-203ENST00000513525 REXO2Q9Y3B8 237 aaKnown RBP10.3□□□□□ -0.76
CCL28-203ENST00000513525 TBC1D3BA6NDS4 549 aa10.29□□□□□ -0.76
CCL28-203ENST00000513525 NEDD8-MDP1E9PL57 170 aa10.29□□□□□ -0.76
CCL28-203ENST00000513525 XPO1O14980 1071 aaKnown RBP10.29□□□□□ -0.76
CCL28-203ENST00000513525 DCLK1O15075 740 aa10.29□□□□□ -0.76
CCL28-203ENST00000513525 MDM4O15151 490 aa10.29□□□□□ -0.76
CCL28-203ENST00000513525 EPHB6O15197 1021 aa10.29□□□□□ -0.76
CCL28-203ENST00000513525 URI1O94763 535 aaPredicted RBP10.29□□□□□ -0.76
CCL28-203ENST00000513525 LCA5LO95447 670 aa10.29□□□□□ -0.76
CCL28-203ENST00000513525 TYRP14679 529 aa10.29□□□□□ -0.76
CCL28-203ENST00000513525 FMO5P49326 533 aa10.29□□□□□ -0.76
CCL28-203ENST00000513525 BCAT1P54687 386 aa10.29□□□□□ -0.76
CCL28-203ENST00000513525 COG7P83436 770 aa10.29□□□□□ -0.76
CCL28-203ENST00000513525 SF3A2Q15428 464 aaKnown RBP10.29□□□□□ -0.76
CCL28-203ENST00000513525 SPA17Q15506 151 aa10.29□□□□□ -0.76
CCL28-203ENST00000513525 AASDHQ4L235 1098 aaPredicted RBP10.29□□□□□ -0.76
CCL28-203ENST00000513525 SGO2Q562F6 1265 aa10.29□□□□□ -0.76
CCL28-203ENST00000513525 PM20D1Q6GTS8 502 aa10.29□□□□□ -0.76
CCL28-203ENST00000513525 GRAMD4Q6IC98 578 aa10.29□□□□□ -0.76
CCL28-203ENST00000513525 RRAGAQ7L523 313 aa10.29□□□□□ -0.76
CCL28-203ENST00000513525 ZNF513Q8N8E2 541 aaPredicted RBP10.29□□□□□ -0.76
CCL28-203ENST00000513525 ANKRD7Q92527 254 aa10.29□□□□□ -0.76
CCL28-203ENST00000513525 CCDC42Q96M95 316 aa10.29□□□□□ -0.76
CCL28-203ENST00000513525 BBS2Q9BXC9 721 aa10.29□□□□□ -0.76
CCL28-203ENST00000513525 FBXO10Q9UK96 956 aa10.29□□□□□ -0.76
CCL28-203ENST00000513525 NUDT5Q9UKK9 219 aa10.29□□□□□ -0.76
CCL28-203ENST00000513525 TSPAN16Q9UKR8 245 aa10.29□□□□□ -0.76
CCL28-203ENST00000513525 PCDH15Q96QU1 1955 aa10.29□□□□□ -0.76
CCL28-203ENST00000513525 BCLAF3A2AJT9 711 aaKnown RBP10.28□□□□□ -0.76
CCL28-203ENST00000513525 DCDC2BA2VCK2 349 aa10.28□□□□□ -0.76
CCL28-203ENST00000513525 LRRC53A6NM62 1247 aa10.28□□□□□ -0.76
CCL28-203ENST00000513525 FANCGO15287 622 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms