RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.93■□□□□ 0.62
PDLIM7-216ENST00000506537 RRN3Q9NYV6 651 aa18.93■□□□□ 0.62
PDLIM7-216ENST00000506537 HCN2Q9UL51 889 aa18.93■□□□□ 0.62
PDLIM7-216ENST00000506537 STAP1Q9ULZ2 295 aa18.93■□□□□ 0.62
PDLIM7-216ENST00000506537 LUC7L2Q9Y383 392 aaKnown RBP18.93■□□□□ 0.62
PDLIM7-216ENST00000506537 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.93■□□□□ 0.624e-7■□□□□ 8.9
PDLIM7-216ENST00000506537 PRRT4C9JH25 899 aa18.92■□□□□ 0.62
PDLIM7-216ENST00000506537 I6L893 689 aaPredicted RBP18.92■□□□□ 0.62
PDLIM7-216ENST00000506537 CYBBP04839 570 aa18.92■□□□□ 0.62
PDLIM7-216ENST00000506537 SP9P0CG40 484 aa18.92■□□□□ 0.62
PDLIM7-216ENST00000506537 CCR1P32246 355 aa18.92■□□□□ 0.62
PDLIM7-216ENST00000506537 KIR2DL1P43626 348 aaPredicted RBP18.92■□□□□ 0.62
PDLIM7-216ENST00000506537 CCR3P51677 355 aa18.92■□□□□ 0.62
PDLIM7-216ENST00000506537 NHLH1Q02575 133 aa18.92■□□□□ 0.62
PDLIM7-216ENST00000506537 CSTF1Q05048 431 aaKnown RBP18.92■□□□□ 0.62
PDLIM7-216ENST00000506537 PPP2R5DQ14738 602 aa18.92■□□□□ 0.62
PDLIM7-216ENST00000506537 RAB6CQ53S08 254 aa18.92■□□□□ 0.62
PDLIM7-216ENST00000506537 EMC10Q5UCC4 262 aa18.92■□□□□ 0.62
PDLIM7-216ENST00000506537 BTN2A3PQ96KV6 586 aa18.92■□□□□ 0.62
PDLIM7-216ENST00000506537 RAB6CQ9H0N0 254 aa18.92■□□□□ 0.62
PDLIM7-216ENST00000506537 ZDHHC4Q9NPG8 344 aa18.92■□□□□ 0.62
PDLIM7-216ENST00000506537 FAM86C1Q9NVL1 165 aa18.92■□□□□ 0.62
PDLIM7-216ENST00000506537 FBXO4Q9UKT5 387 aa18.92■□□□□ 0.62
PDLIM7-216ENST00000506537 TBC1D3BA6NDS4 549 aa18.91■□□□□ 0.62
PDLIM7-216ENST00000506537 C2CD4BA6NLJ0 364 aa18.91■□□□□ 0.62
PDLIM7-216ENST00000506537 K7ESF4 209 aa18.91■□□□□ 0.62
PDLIM7-216ENST00000506537 PAPSS2O95340 614 aaPredicted RBP18.91■□□□□ 0.62
PDLIM7-216ENST00000506537 RRM1P23921 792 aa18.91■□□□□ 0.62
PDLIM7-216ENST00000506537 TNFRSF4P43489 277 aa18.91■□□□□ 0.62
PDLIM7-216ENST00000506537 CXCL12P48061 93 aa18.91■□□□□ 0.62
PDLIM7-216ENST00000506537 CXCR3P49682 368 aa18.91■□□□□ 0.62
PDLIM7-216ENST00000506537 C2orf27AQ580R0 203 aa18.91■□□□□ 0.62
PDLIM7-216ENST00000506537 TDRD12Q587J7 1177 aaKnown RBP18.91■□□□□ 0.62
PDLIM7-216ENST00000506537 MS4A13Q5J8X5 152 aa18.91■□□□□ 0.62
PDLIM7-216ENST00000506537 C10orf76Q5T2E6 689 aa18.91■□□□□ 0.62
PDLIM7-216ENST00000506537 RAP1GAP2Q684P5 730 aa18.91■□□□□ 0.62
PDLIM7-216ENST00000506537 ATP6V0D2Q8N8Y2 350 aa18.91■□□□□ 0.62
PDLIM7-216ENST00000506537 WFDC5Q8TCV5 224 aa18.91■□□□□ 0.62
PDLIM7-216ENST00000506537 RXFP2Q8WXD0 754 aa18.91■□□□□ 0.62
PDLIM7-216ENST00000506537 TMA16Q96EY4 203 aaKnown RBP18.91■□□□□ 0.62
PDLIM7-216ENST00000506537 PRMT1Q99873 361 aaKnown RBP18.91■□□□□ 0.62
PDLIM7-216ENST00000506537 SLC27A6Q9Y2P4 619 aa18.91■□□□□ 0.62
PDLIM7-216ENST00000506537 ATMINO43313 823 aaPredicted RBP18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 TBL1XO60907 577 aa18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 ADCY5O95622 1261 aa18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 SERPING1P05155 500 aa18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 SLC2A3P11169 496 aa18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 KRT3P12035 628 aa18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 TACR2P21452 398 aa18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 HNRNPH3P31942 346 aaKnown RBP18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 RFC1P35251 1148 aaPredicted RBP18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 RPS24P62847 133 aaKnown RBP18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 DEUP1Q05D60 604 aa18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 TRIM14Q14142 442 aa18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 GEN1Q17RS7 908 aa18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 C15orf59Q2T9L4 293 aaPredicted RBP18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 CCDC14Q49A88 953 aa18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 PPP1R15BQ5SWA1 713 aa18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 SH3PXD2AQ5TCZ1 1133 aa18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 DNAJC24Q6P3W2 148 aa18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 CHSY1Q86X52 802 aa18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 HJURPQ8NCD3 748 aaPredicted RBP18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 RNF34Q969K3 372 aa18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 DDX50Q9BQ39 737 aaKnown RBP18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 IRX2Q9BZI1 471 aaPredicted RBP18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 TMPRSS4Q9NRS4 437 aa18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 ARHGEF38Q9NXL2 777 aa18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 ARHGAP20Q9P2F6 1191 aa18.9■□□□□ 0.62
PDLIM7-216ENST00000506537 SIGLEC16A6NMB1 481 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 PAGE1O75459 146 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 ENDOD1O94919 500 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 GZMAP12544 262 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 PDGFRAP16234 1089 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 ABCB4P21439 1286 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 HLA-FP30511 346 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 TIE1P35590 1138 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 GGCXP38435 758 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 RPL7AP62424 266 aaKnown RBP18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 ATP11AP98196 1134 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 DMWDQ09019 674 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 ARID5BQ14865 1188 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 ZNF528Q3MIS6 628 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 PREPLQ4J6C6 727 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 BRMS1LQ5PSV4 323 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 MPP7Q5T2T1 576 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 WDR59Q6PJI9 974 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 LGI2Q8N0V4 545 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 CFAP52Q8N1V2 620 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 CCDC33Q8N5R6 958 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 ALLCQ8N6M5 410 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 IL17RCQ8NAC3 791 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 NELL1Q92832 810 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 ATOH1Q92858 354 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 VCPIP1Q96JH7 1222 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 PHOX2BQ99453 314 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 DNAJC7Q99615 494 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 SELENOOQ9BVL4 669 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 SLC2A11Q9BYW1 496 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 TKTL2Q9H0I9 626 aa18.89■□□□□ 0.61
PDLIM7-216ENST00000506537 STIM2Q9P246 746 aa18.89■□□□□ 0.61
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