RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 SCUBE2Q9NQ36 999 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 MFHAS1Q9Y4C4 1052 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 HMX2A2RU54 273 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 RRN3P2A6NIE6 340 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 NRG2O14511 850 aaPredicted RBP6.18□□□□□ -1.42
SCLT1-207ENST00000506233 OGTO15294 1046 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 DAPK3O43293 454 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 LINC00271P0C7V0 271 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 SMIM10L2AP0DMW4 78 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 SMIM10L2BP0DMW5 78 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 NCAM1P13591 858 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 ETS1P14921 441 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 GRK6P43250 576 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 RABGGTBP53611 331 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 GFRA1P56159 465 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 GPC5P78333 572 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 CRHR2Q13324 411 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 ATAT1Q5SQI0 421 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 LHX8Q68G74 356 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 LIAT1Q6ZQX7 453 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 GALNT5Q7Z7M9 940 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 MYLK4Q86YV6 388 aaPredicted RBP6.18□□□□□ -1.42
SCLT1-207ENST00000506233 PQLC3Q8N755 202 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 NAXEQ8NCW5 288 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 ZMIZ2Q8NF64 920 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 ATG4AQ8WYN0 398 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 MAGEB10Q96LZ2 347 aaPredicted RBP6.18□□□□□ -1.42
SCLT1-207ENST00000506233 SLITRK1Q96PX8 696 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 VPS11Q9H270 941 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 LHX5Q9H2C1 402 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 NXF3Q9H4D5 531 aaKnown RBP6.18□□□□□ -1.42
SCLT1-207ENST00000506233 UBN1Q9NPG3 1134 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 PRDM6Q9NQX0 595 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 SAMM50Q9Y512 469 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 CTAGE15A4D2H0 777 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 CCDC169A6NNP5 214 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 H3BRJ5 948 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 HNRNPDLO14979 420 aaKnown RBP6.18□□□□□ -1.42
SCLT1-207ENST00000506233 OAS1P00973 400 aaKnown RBP6.18□□□□□ -1.42
SCLT1-207ENST00000506233 WEE2P0C1S8 567 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 CTAGE8P0CG41 777 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 STAG3L1P0CL83 205 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 RFC1P35251 1148 aaPredicted RBP6.18□□□□□ -1.42
SCLT1-207ENST00000506233 MAGEA3P43357 314 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 ATXN1P54253 815 aaKnown RBP6.18□□□□□ -1.42
SCLT1-207ENST00000506233 LAMC2Q13753 1193 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 GLE1Q53GS7 698 aaKnown RBP6.18□□□□□ -1.42
SCLT1-207ENST00000506233 MZT2BQ6NZ67 158 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 TXNDC11Q6PKC3 985 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 CTAGE6Q86UF2 777 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 HEATR4Q86WZ0 1026 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 IGDCC3Q8IVU1 814 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 CTAGE4Q8IX94 777 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 SH2D3CQ8N5H7 860 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 BVESQ8NE79 360 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 SLC35B2Q8TB61 432 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 KCTD12Q96CX2 325 aaKnown RBP6.18□□□□□ -1.42
SCLT1-207ENST00000506233 PPP1R16BQ96T49 567 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 PBX4Q9BYU1 374 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 IFT80Q9P2H3 777 aaPredicted RBP6.18□□□□□ -1.42
SCLT1-207ENST00000506233 INVSQ9Y283 1065 aa6.18□□□□□ -1.42
SCLT1-207ENST00000506233 CCL15-CCL14A0A0B4J2E2 113 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 KCNK3O14649 394 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 EFSO43281 561 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 AKR1B10O60218 316 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 PRKCBP05771 671 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 H2AFZP0C0S5 128 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 DLATP10515 647 aaKnown RBP6.17□□□□□ -1.42
SCLT1-207ENST00000506233 NF2P35240 595 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 GALNT1Q10472 559 aaPredicted RBP6.17□□□□□ -1.42
SCLT1-207ENST00000506233 CLUL1Q15846 466 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 GRIK4Q16099 956 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 CCL15Q16663 113 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 CA9Q16790 459 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 ATF7IP2Q5U623 682 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 FSTL4Q6MZW2 842 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 PMF1Q6P1K2 205 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 C6orf89Q6UWU4 347 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 H2AFVQ71UI9 128 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 FASTKD5Q7L8L6 764 aaKnown RBP6.17□□□□□ -1.42
SCLT1-207ENST00000506233 GPRIN1Q7Z2K8 1008 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 FAM228AQ86W67 206 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 SLC13A5Q86YT5 568 aaPredicted RBP6.17□□□□□ -1.42
SCLT1-207ENST00000506233 RHPN2Q8IUC4 686 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 KLHDC8BQ8IXV7 354 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 RNF217Q8TC41 542 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 SENP6Q9GZR1 1112 aaPredicted RBP6.17□□□□□ -1.42
SCLT1-207ENST00000506233 C10orf88Q9H8K7 445 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 AGO3Q9H9G7 860 aaKnown RBP6.17□□□□□ -1.42
SCLT1-207ENST00000506233 USP29Q9HBJ7 922 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 TMBIM4Q9HC24 238 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 SETD4Q9NVD3 440 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 CPA4Q9UI42 421 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 PCDHB2Q9Y5E7 798 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 PROSCO94903 275 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 FGGP02679 453 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 GSTP1P09211 210 aaKnown RBP6.17□□□□□ -1.42
SCLT1-207ENST00000506233 GPC1P35052 558 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 KCNJ1P48048 391 aa6.17□□□□□ -1.42
SCLT1-207ENST00000506233 SLC26A2P50443 739 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms