RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 SEPSECSQ9HD40 501 aaKnown RBP4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 LIN7CQ9NUP9 197 aaKnown RBP4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 ASNSD1Q9NWL6 643 aa4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 C19orf53Q9UNZ5 99 aaPredicted RBP4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 B3GNT3Q9Y2A9 372 aa4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 PCDHA10Q9Y5I2 948 aa4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 PLEKHD1A6NEE1 506 aa4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 WIPF3A6NGB9 483 aa4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 H0Y3Z8 333 aa4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 RBMXL2O75526 392 aaKnown RBP4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 NDUFS1P28331 727 aa4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 MPGP29372 298 aa4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 SLC8A1P32418 973 aa4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 GRK5P34947 590 aa4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 FOXL2P58012 376 aa4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 CUL4BQ13620 913 aa4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 SEC23BQ15437 767 aa4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 WDR93Q6P2C0 686 aa4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 ZNF66Q6ZN08 573 aa4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 MOGAT3Q86VF5 341 aa4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 LAS2Q8IYD9 372 aa4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 OR6Y1Q8NGX8 325 aa4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 SCLT1Q96NL6 688 aa4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 GPR78Q96P69 363 aa4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 SH2D3AQ9BRG2 576 aa4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 SAYSD1Q9NPB0 183 aa4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 ARL8BQ9NVJ2 186 aa4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 KIF17Q9P2E2 1029 aa4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 KCND3Q9UK17 655 aa4.58□□□□□ -1.68
TOPBP1-204ENST00000505804 TBC1D3DA0A087WVF3 549 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 TBC1D3IA0A087WXS9 549 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 TBC1D3EA0A087X179 549 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 TBC1D3KA0A087X1G2 549 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 LOC102724159A0A0B4J2E5 919 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 TBC1D3BA6NDS4 549 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 TBC1D3FA6NER0 549 aaPredicted RBP4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 AGAP5A6NIR3 686 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 TBC1D3LB9A6J9 549 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 RRHO14718 337 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 FAM155BO75949 473 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 KRT38O76015 456 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 LATS1O95835 1130 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 CYP3A4P08684 503 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 CYP21A2P08686 494 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 TBC1D3HP0C7X1 549 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 SERPINA4P29622 427 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 IDUAP35475 653 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 CDK7P50613 346 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 ZNF84P51523 738 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 PWP2Q15269 919 aaKnown RBP4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 CEP78Q5JTW2 689 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 TBC1D3GQ6DHY5 549 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 TBC1D3CQ6IPX1 549 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 PTF1AQ7RTS3 328 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 TFAP2DQ7Z6R9 452 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 TBC1D3Q8IZP1 549 aaPredicted RBP4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 SRFBP1Q8NEF9 429 aaKnown RBP4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 ZNF398Q8TD17 642 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 NTN5Q8WTR8 489 aaPredicted RBP4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 CLEC4CQ8WTT0 213 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 DDB2Q92466 427 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 CPT1BQ92523 772 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 CELF1Q92879 486 aaKnown RBP4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 TRIM63Q969Q1 353 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 RILPL2Q969X0 211 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 ZNF764Q96H86 408 aaPredicted RBP4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 ISCA1Q9BUE6 129 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 RNF26Q9BY78 433 aaPredicted RBP4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 ADARB2Q9NS39 739 aaKnown RBP4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 PTGFRNQ9P2B2 879 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 LZTS1Q9Y250 596 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 GPR52Q9Y2T5 361 aa4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 SIRT4Q9Y6E7 314 aaPredicted RBP4.57□□□□□ -1.68
TOPBP1-204ENST00000505804 WDR17Q8IZU2 1322 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 B9A039 149 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 E7EVH7 732 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 PPFIA2O75334 1257 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 HEXIM1O94992 359 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 ENO1P06733 434 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 ADD2P35612 726 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 PPM1FP49593 454 aaPredicted RBP4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 ARL4CP56559 192 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 SLC37A1P57057 533 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 TAS2R50P59544 299 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 YPEL5P62699 121 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 TLE3Q04726 772 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 PDCLQ13371 301 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 FAM110CQ1W6H9 321 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 TBRG1Q3YBR2 411 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 SLC39A5Q6ZMH5 540 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 ZNF813Q6ZN06 617 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 SYT13Q7L8C5 426 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 FTSJ3Q8IY81 847 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 MYRIPQ8NFW9 859 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 AFG1LQ8WV93 481 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 ASB12Q8WXK4 309 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 GOLGA1Q92805 767 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 ZNF845Q96IR2 970 aaPredicted RBP4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 SENP7Q9BQF6 1050 aa4.56□□□□□ -1.68
TOPBP1-204ENST00000505804 GATA5Q9BWX5 397 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms