RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 FYB2Q5VWT5 728 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 SFTPA1Q8IWL2 248 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 PJA1Q8NG27 643 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 AZIN2Q96A70 460 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 MSANTD3Q96H12 275 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 PRICKLE1Q96MT3 831 aaPredicted RBP17.1■□□□□ 0.33
SCLT1-205ENST00000503401 P2RY13Q9BPV8 354 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 NUP85Q9BW27 656 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 MARK1Q9P0L2 795 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 SLC12A6Q9UHW9 1150 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 CLEC4EQ9ULY5 219 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 SCINQ9Y6U3 715 aa17.1■□□□□ 0.33
SCLT1-205ENST00000503401 GPR37L1O60883 481 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 TULP3O75386 442 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 PAGE1O75459 146 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 ENDOD1O94919 500 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 CYP1A2P05177 515 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 H2AFZP0C0S5 128 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 PSMA2P25787 234 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 AMPD2Q01433 879 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 KDSRQ06136 332 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 MS4A13Q5J8X5 152 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 H2AFVQ71UI9 128 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 CHSY1Q86X52 802 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 ETFBKMTQ8IXQ9 262 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 ZNF687Q8N1G0 1237 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 CFAP52Q8N1V2 620 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 CENPIQ92674 756 aaPredicted RBP17.09■□□□□ 0.33
SCLT1-205ENST00000503401 CD101Q93033 1021 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 BTBD6Q96KE9 485 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 CNPY3Q9BT09 278 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 C1QTNF1Q9BXJ1 281 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 SIK2Q9H0K1 926 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 MRPL47Q9HD33 250 aaKnown RBP17.09■□□□□ 0.33
SCLT1-205ENST00000503401 RBM12Q9NTZ6 932 aaKnown RBP17.09■□□□□ 0.33
SCLT1-205ENST00000503401 ARHGEF38Q9NXL2 777 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 SIT1Q9Y3P8 196 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 HS3ST4Q9Y661 456 aa17.09■□□□□ 0.33
SCLT1-205ENST00000503401 MYO18AQ92614 2054 aaKnown RBP17.08■□□□□ 0.32
SCLT1-205ENST00000503401 ANTXRLA6NF34 631 aa17.08■□□□□ 0.32
SCLT1-205ENST00000503401 GFRA2O00451 464 aa17.08■□□□□ 0.32
SCLT1-205ENST00000503401 EGFP01133 1207 aa17.08■□□□□ 0.32
SCLT1-205ENST00000503401 PENKP01210 267 aaPredicted RBP17.08■□□□□ 0.32
SCLT1-205ENST00000503401 CYBBP04839 570 aa17.08■□□□□ 0.32
SCLT1-205ENST00000503401 TACR2P21452 398 aa17.08■□□□□ 0.32
SCLT1-205ENST00000503401 FECHP22830 423 aa17.08■□□□□ 0.32
SCLT1-205ENST00000503401 RPS24P62847 133 aaKnown RBP17.08■□□□□ 0.32
SCLT1-205ENST00000503401 BRMS1LQ5PSV4 323 aa17.08■□□□□ 0.32
SCLT1-205ENST00000503401 DAB2IPQ5VWQ8 1189 aa17.08■□□□□ 0.32
SCLT1-205ENST00000503401 ASTLQ6HA08 431 aaPredicted RBP17.08■□□□□ 0.32
SCLT1-205ENST00000503401 FSTL4Q6MZW2 842 aa17.08■□□□□ 0.32
SCLT1-205ENST00000503401 STRADAQ7RTN6 431 aa17.08■□□□□ 0.32
SCLT1-205ENST00000503401 BMP8AQ7Z5Y6 402 aa17.08■□□□□ 0.32
SCLT1-205ENST00000503401 CCDC105Q8IYK2 499 aa17.08■□□□□ 0.32
SCLT1-205ENST00000503401 LGI2Q8N0V4 545 aa17.08■□□□□ 0.32
SCLT1-205ENST00000503401 FBXL6Q8N531 539 aa17.08■□□□□ 0.32
SCLT1-205ENST00000503401 TMA16Q96EY4 203 aaKnown RBP17.08■□□□□ 0.32
SCLT1-205ENST00000503401 DNAJC17Q9NVM6 304 aaKnown RBP17.08■□□□□ 0.32
SCLT1-205ENST00000503401 STIM2Q9P246 746 aa17.08■□□□□ 0.32
SCLT1-205ENST00000503401 MRPS17Q9Y2R5 130 aaKnown RBP17.08■□□□□ 0.32
SCLT1-205ENST00000503401 PRR33A8MZF0 331 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 CACNG3O60359 315 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 TBL1XO60907 577 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 HOXD9P28356 352 aaPredicted RBP17.07■□□□□ 0.32
SCLT1-205ENST00000503401 FZD5Q13467 585 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 MPPE1Q53F39 396 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 TMEM196Q5HYL7 178 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 SCYL2Q6P3W7 929 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 C1orf228Q6PIY5 440 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 TMTC1Q8IUR5 882 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 TMEM139Q8IV31 216 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 CCDC185Q8N715 623 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 TMEM105Q8N8V8 129 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 CTNNBL1Q8WYA6 563 aaPredicted RBP17.07■□□□□ 0.32
SCLT1-205ENST00000503401 EZH1Q92800 747 aaPredicted RBP17.07■□□□□ 0.32
SCLT1-205ENST00000503401 PRMT1Q99873 361 aaKnown RBP17.07■□□□□ 0.32
SCLT1-205ENST00000503401 BAG1Q99933 345 aaPredicted RBP17.07■□□□□ 0.32
SCLT1-205ENST00000503401 DDX50Q9BQ39 737 aaKnown RBP17.07■□□□□ 0.32
SCLT1-205ENST00000503401 LRFN3Q9BTN0 628 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 MAGEB5Q9BZ81 275 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 VANGL2Q9ULK5 521 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 TFR2Q9UP52 801 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 KMT2EQ8IZD2 1858 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 GOLGA6L6A8MZA4 724 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 AOC1P19801 751 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 GRSF1Q12849 480 aaKnown RBP eCLIP17.07■□□□□ 0.32
SCLT1-205ENST00000503401 AUHQ13825 339 aaKnown RBP17.07■□□□□ 0.32
SCLT1-205ENST00000503401 RAD9BQ6WBX8 426 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 C14orf80Q86SX3 495 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 CIR1Q86X95 450 aaPredicted RBP17.07■□□□□ 0.32
SCLT1-205ENST00000503401 SUGP1Q8IWZ8 645 aaKnown RBP17.07■□□□□ 0.32
SCLT1-205ENST00000503401 CCDC170Q8IYT3 715 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 ARFGAP1Q8N6T3 406 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 ZNF564Q8TBZ8 553 aaPredicted RBP17.07■□□□□ 0.32
SCLT1-205ENST00000503401 XPO6Q96QU8 1125 aaKnown RBP17.07■□□□□ 0.32
SCLT1-205ENST00000503401 PNKPQ96T60 521 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 LMAN1LQ9HAT1 526 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 ARHGEF4Q9NR80 690 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 CTTNBP2NLQ9P2B4 639 aa17.07■□□□□ 0.32
SCLT1-205ENST00000503401 DEC1Q9P2X7 70 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms