RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 THAP12O43422 761 aa16.9■□□□□ 0.3
SCLT1-204ENST00000503215 ACSL4O60488 711 aa16.9■□□□□ 0.3
SCLT1-204ENST00000503215 TBL1XO60907 577 aa16.9■□□□□ 0.3
SCLT1-204ENST00000503215 LATS1O95835 1130 aa16.9■□□□□ 0.3
SCLT1-204ENST00000503215 PON1P27169 355 aa16.9■□□□□ 0.3
SCLT1-204ENST00000503215 USP8P40818 1118 aa16.9■□□□□ 0.3
SCLT1-204ENST00000503215 NOVA1P51513 510 aaKnown RBP16.9■□□□□ 0.3
SCLT1-204ENST00000503215 RPS24P62847 133 aaKnown RBP16.9■□□□□ 0.3
SCLT1-204ENST00000503215 STARD3Q14849 445 aa16.9■□□□□ 0.3
SCLT1-204ENST00000503215 PTPRNQ16849 979 aa16.9■□□□□ 0.3
SCLT1-204ENST00000503215 SH3PXD2AQ5TCZ1 1133 aa16.9■□□□□ 0.3
SCLT1-204ENST00000503215 SLC23A3Q6PIS1 610 aa16.9■□□□□ 0.3
SCLT1-204ENST00000503215 CHST9Q7L1S5 443 aa16.9■□□□□ 0.3
SCLT1-204ENST00000503215 KIAA0907Q7Z7F0 614 aaPredicted RBP16.9■□□□□ 0.3
SCLT1-204ENST00000503215 TAC4Q86UU9 113 aa16.9■□□□□ 0.3
SCLT1-204ENST00000503215 WDTC1Q8N5D0 677 aa16.9■□□□□ 0.3
SCLT1-204ENST00000503215 FAM149B1Q96BN6 582 aa16.9■□□□□ 0.3
SCLT1-204ENST00000503215 TOE1Q96GM8 510 aaKnown RBP16.9■□□□□ 0.3
SCLT1-204ENST00000503215 ZNF419Q96HQ0 510 aaPredicted RBP16.9■□□□□ 0.3
SCLT1-204ENST00000503215 LMLNQ96KR4 655 aa16.9■□□□□ 0.3
SCLT1-204ENST00000503215 PRICKLE1Q96MT3 831 aaPredicted RBP16.9■□□□□ 0.3
SCLT1-204ENST00000503215 MTG2Q9H4K7 406 aa16.9■□□□□ 0.3
SCLT1-204ENST00000503215 SIX2Q9NPC8 291 aa16.9■□□□□ 0.3
SCLT1-204ENST00000503215 ITM2CQ9NQX7 267 aa16.9■□□□□ 0.3
SCLT1-204ENST00000503215 USP36Q9P275 1121 aaKnown RBP16.9■□□□□ 0.3
SCLT1-204ENST00000503215 TIMM44O43615 452 aa16.89■□□□□ 0.3
SCLT1-204ENST00000503215 SYNCRIPO60506 623 aaKnown RBP16.89■□□□□ 0.3
SCLT1-204ENST00000503215 EPHX1P07099 455 aa16.89■□□□□ 0.3
SCLT1-204ENST00000503215 PNMA6AP0CW24 399 aaPredicted RBP16.89■□□□□ 0.3
SCLT1-204ENST00000503215 PABPC1P11940 636 aaKnown RBP16.89■□□□□ 0.3
SCLT1-204ENST00000503215 PMLP29590 882 aa16.89■□□□□ 0.3
SCLT1-204ENST00000503215 GNA15P30679 374 aa16.89■□□□□ 0.3
SCLT1-204ENST00000503215 ANP32AP39687 249 aaKnown RBP16.89■□□□□ 0.3
SCLT1-204ENST00000503215 TPMTP51580 245 aa16.89■□□□□ 0.3
SCLT1-204ENST00000503215 EIF4HQ15056 248 aaKnown RBP16.89■□□□□ 0.3
SCLT1-204ENST00000503215 DAB2IPQ5VWQ8 1189 aa16.89■□□□□ 0.3
SCLT1-204ENST00000503215 SERPINA13PQ6UXR4 307 aa16.89■□□□□ 0.3
SCLT1-204ENST00000503215 CFAP52Q8N1V2 620 aa16.89■□□□□ 0.3
SCLT1-204ENST00000503215 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.89■□□□□ 0.3
SCLT1-204ENST00000503215 SLC39A13Q96H72 371 aa16.89■□□□□ 0.3
SCLT1-204ENST00000503215 NUSAP1Q9BXS6 441 aaKnown RBP16.89■□□□□ 0.3
SCLT1-204ENST00000503215 NUCKS1Q9H1E3 243 aaKnown RBP16.89■□□□□ 0.3
SCLT1-204ENST00000503215 TMEM245Q9H330 911 aa16.89■□□□□ 0.3
SCLT1-204ENST00000503215 CLSTN2Q9H4D0 955 aa16.89■□□□□ 0.3
SCLT1-204ENST00000503215 CAPN10Q9HC96 672 aa16.89■□□□□ 0.3
SCLT1-204ENST00000503215 WSB2Q9NYS7 404 aaPredicted RBP16.89■□□□□ 0.3
SCLT1-204ENST00000503215 GGA2Q9UJY4 613 aa16.89■□□□□ 0.3
SCLT1-204ENST00000503215 ADAMTS9Q9P2N4 1935 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 NPC1O15118 1278 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 NDUFS2O75306 463 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 MOCS2O96007 188 aaPredicted RBP16.89■□□□□ 0.29
SCLT1-204ENST00000503215 CD6P30203 668 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 SLC11A2P49281 568 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 RING1Q06587 406 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 NUMA1Q14980 2115 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 DUOXA1Q1HG43 343 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 DPCR1Q3MIW9 517 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 FNDC3BQ53EP0 1204 aaKnown RBP16.89■□□□□ 0.29
SCLT1-204ENST00000503215 HSP90AA4PQ58FG1 418 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 ZC3H12AQ5D1E8 599 aaKnown RBP16.89■□□□□ 0.29
SCLT1-204ENST00000503215 NUGGCQ68CJ6 796 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 MBLAC2Q68D91 279 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 DPY19L2P1Q6NXN4 242 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 GBP6Q6ZN66 633 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 MMS22LQ6ZRQ5 1243 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 TMEM110Q86TL2 294 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 METTL3Q86U44 580 aaKnown RBP16.89■□□□□ 0.29
SCLT1-204ENST00000503215 PASD1Q8IV76 773 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 UNC45BQ8IWX7 931 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 MLKLQ8NB16 471 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 DEFB124Q8NES8 71 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 STK32AQ8WU08 396 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 SHC3Q92529 594 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 GOLGA1Q92805 767 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 SIPA1Q96FS4 1042 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 GTPBP2Q9BX10 602 aaKnown RBP16.89■□□□□ 0.29
SCLT1-204ENST00000503215 GPR174Q9BXC1 333 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 APEX2Q9UBZ4 518 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 SLC6A14Q9UN76 642 aa16.89■□□□□ 0.29
SCLT1-204ENST00000503215 CKAP5Q14008 2032 aa16.88■□□□□ 0.29
SCLT1-204ENST00000503215 MAP1BP46821 2468 aaKnown RBP16.88■□□□□ 0.29
SCLT1-204ENST00000503215 SERPINF2P08697 491 aa16.88■□□□□ 0.29
SCLT1-204ENST00000503215 ACADSBP45954 432 aa16.88■□□□□ 0.29
SCLT1-204ENST00000503215 MTIF2P46199 727 aaKnown RBP16.88■□□□□ 0.29
SCLT1-204ENST00000503215 ZNF445P59923 1031 aa16.88■□□□□ 0.29
SCLT1-204ENST00000503215 ARID5AQ03989 594 aa16.88■□□□□ 0.29
SCLT1-204ENST00000503215 LMAN2Q12907 356 aa16.88■□□□□ 0.29
SCLT1-204ENST00000503215 PDCLQ13371 301 aa16.88■□□□□ 0.29
SCLT1-204ENST00000503215 CAMK2GQ13555 558 aaPredicted RBP16.88■□□□□ 0.29
SCLT1-204ENST00000503215 EXOC3L4Q17RC7 722 aa16.88■□□□□ 0.29
SCLT1-204ENST00000503215 FSCBQ5H9T9 825 aa16.88■□□□□ 0.29
SCLT1-204ENST00000503215 ENOSF1Q7L5Y1 443 aa16.88■□□□□ 0.29
SCLT1-204ENST00000503215 FAM124AQ86V42 546 aa16.88■□□□□ 0.29
SCLT1-204ENST00000503215 WFIKKN2Q8TEU8 576 aa16.88■□□□□ 0.29
SCLT1-204ENST00000503215 AZIN2Q96A70 460 aa16.88■□□□□ 0.29
SCLT1-204ENST00000503215 CPXM1Q96SM3 734 aa16.88■□□□□ 0.29
SCLT1-204ENST00000503215 INTS6Q9UL03 887 aaKnown RBP16.88■□□□□ 0.29
SCLT1-204ENST00000503215 TLR6Q9Y2C9 796 aa16.88■□□□□ 0.29
SCLT1-204ENST00000503215 PCNX2A6NKB5 2137 aa16.87■□□□□ 0.29
SCLT1-204ENST00000503215 FOXN3O00409 490 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms