RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 PNMA6AP0CW24 399 aaPredicted RBP15.93■□□□□ 0.14
NUP50-219ENST00000497960 HOXD9P28356 352 aaPredicted RBP15.93■□□□□ 0.14
NUP50-219ENST00000497960 ARID5AQ03989 594 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 PUM1Q14671 1186 aaKnown RBP eCLIP15.93■□□□□ 0.14
NUP50-219ENST00000497960 STARD3Q14849 445 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 EIF4HQ15056 248 aaKnown RBP15.93■□□□□ 0.14
NUP50-219ENST00000497960 GEN1Q17RS7 908 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 RSPO4Q2I0M5 234 aaPredicted RBP15.93■□□□□ 0.14
NUP50-219ENST00000497960 EFHC1Q5JVL4 640 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 SYPL2Q5VXT5 272 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 DPY19L2P1Q6NXN4 242 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 SARM1Q6SZW1 724 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 PRR23CQ6ZRP0 262 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 TAC4Q86UU9 113 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 WDTC1Q8N5D0 677 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 C1orf131Q8NDD1 294 aaKnown RBP15.93■□□□□ 0.14
NUP50-219ENST00000497960 OLIG1Q8TAK6 271 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 ADAM32Q8TC27 787 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 IPO4Q8TEX9 1081 aaKnown RBP15.93■□□□□ 0.14
NUP50-219ENST00000497960 FCRL2Q96LA5 508 aaPredicted RBP15.93■□□□□ 0.14
NUP50-219ENST00000497960 CPXM1Q96SM3 734 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 GABRG3Q99928 467 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 TRIM5Q9C035 493 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 CIPCQ9C0C6 399 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 ELOVL2Q9NXB9 296 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 CACNA2D2Q9NY47 1150 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 CLEC4EQ9ULY5 219 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 A0A1W2PQF6 199 aa15.92■□□□□ 0.14
NUP50-219ENST00000497960 TYW5A2RUC4 315 aaKnown RBP15.92■□□□□ 0.14
NUP50-219ENST00000497960 F8VZ95 297 aa15.92■□□□□ 0.14
NUP50-219ENST00000497960 APOEP02649 317 aa15.92■□□□□ 0.14
NUP50-219ENST00000497960 GLI1P08151 1106 aa15.92■□□□□ 0.14
NUP50-219ENST00000497960 P2RY2P41231 377 aa15.92■□□□□ 0.14
NUP50-219ENST00000497960 CDK17Q00537 523 aa15.92■□□□□ 0.14
NUP50-219ENST00000497960 CREB5Q02930 508 aa15.92■□□□□ 0.14
NUP50-219ENST00000497960 MPP7Q5T2T1 576 aa15.92■□□□□ 0.14
NUP50-219ENST00000497960 PIK3R6Q5UE93 754 aa15.92■□□□□ 0.14
NUP50-219ENST00000497960 PMS2CLQ68D20 193 aa15.92■□□□□ 0.14
NUP50-219ENST00000497960 OR6B2Q6IFH4 312 aa15.92■□□□□ 0.14
NUP50-219ENST00000497960 RFWD3Q6PCD5 774 aa15.92■□□□□ 0.14
NUP50-219ENST00000497960 ZNF557Q8N988 423 aaPredicted RBP15.92■□□□□ 0.14
NUP50-219ENST00000497960 TMEM35BQ8NCS4 154 aa15.92■□□□□ 0.14
NUP50-219ENST00000497960 WFIKKN2Q8TEU8 576 aa15.92■□□□□ 0.14
NUP50-219ENST00000497960 RLN3Q8WXF3 142 aa15.92■□□□□ 0.14
NUP50-219ENST00000497960 NAA15Q9BXJ9 866 aaKnown RBP15.92■□□□□ 0.14
NUP50-219ENST00000497960 STK33Q9BYT3 514 aa15.92■□□□□ 0.14
NUP50-219ENST00000497960 ASNSD1Q9NWL6 643 aa15.92■□□□□ 0.14
NUP50-219ENST00000497960 THAP10Q9P2Z0 257 aaPredicted RBP15.92■□□□□ 0.14
NUP50-219ENST00000497960 TJP2Q9UDY2 1190 aa15.92■□□□□ 0.14
NUP50-219ENST00000497960 CDV3Q9UKY7 258 aaKnown RBP15.92■□□□□ 0.14
NUP50-219ENST00000497960 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.92■□□□□ 0.14
NUP50-219ENST00000497960 STON1Q9Y6Q2 735 aa15.92■□□□□ 0.14
NUP50-219ENST00000497960 EML5Q05BV3 1969 aa15.92■□□□□ 0.14
NUP50-219ENST00000497960 GOLGA6L7A0A1B0GV03 622 aa15.91■□□□□ 0.14
NUP50-219ENST00000497960 TBL1XO60907 577 aa15.91■□□□□ 0.14
NUP50-219ENST00000497960 HSF2BPO75031 334 aa15.91■□□□□ 0.14
NUP50-219ENST00000497960 TRUB2O95900 331 aaKnown RBP15.91■□□□□ 0.14
NUP50-219ENST00000497960 MOCS2O96007 188 aaPredicted RBP15.91■□□□□ 0.14
NUP50-219ENST00000497960 ZNF806P0C7X5 589 aa15.91■□□□□ 0.14
NUP50-219ENST00000497960 CYP11B1P15538 503 aa15.91■□□□□ 0.14
NUP50-219ENST00000497960 GABRG2P18507 467 aa15.91■□□□□ 0.14
NUP50-219ENST00000497960 BCKDHBP21953 392 aa15.91■□□□□ 0.14
NUP50-219ENST00000497960 MPLP40238 635 aa15.91■□□□□ 0.14
NUP50-219ENST00000497960 PBX1P40424 430 aa15.91■□□□□ 0.14
NUP50-219ENST00000497960 DCAF6Q58WW2 860 aa15.91■□□□□ 0.14
NUP50-219ENST00000497960 FAM133BQ5BKY9 247 aaKnown RBP15.91■□□□□ 0.14
NUP50-219ENST00000497960 KIAA1211LQ6NV74 962 aa15.91■□□□□ 0.14
NUP50-219ENST00000497960 LPCAT2Q7L5N7 544 aa15.91■□□□□ 0.14
NUP50-219ENST00000497960 CCDC117Q8IWD4 279 aaPredicted RBP15.91■□□□□ 0.14
NUP50-219ENST00000497960 C12orf50Q8NA57 414 aaPredicted RBP15.91■□□□□ 0.14
NUP50-219ENST00000497960 HJURPQ8NCD3 748 aaPredicted RBP15.91■□□□□ 0.14
NUP50-219ENST00000497960 SLC39A13Q96H72 371 aa15.91■□□□□ 0.14
NUP50-219ENST00000497960 FAM204AQ9H8W3 233 aa15.91■□□□□ 0.14
NUP50-219ENST00000497960 VPS45Q9NRW7 570 aa15.91■□□□□ 0.14
NUP50-219ENST00000497960 CALCOCO1Q9P1Z2 691 aa15.91■□□□□ 0.14
NUP50-219ENST00000497960 SLC12A6Q9UHW9 1150 aa15.91■□□□□ 0.14
NUP50-219ENST00000497960 RAD54BQ9Y620 910 aa15.91■□□□□ 0.14
NUP50-219ENST00000497960 WASH3PC4AMC7 463 aa15.9■□□□□ 0.14
NUP50-219ENST00000497960 SYNCRIPO60506 623 aaKnown RBP15.9■□□□□ 0.14
NUP50-219ENST00000497960 ZNF217O75362 1048 aa15.9■□□□□ 0.14
NUP50-219ENST00000497960 SLC2A3P11169 496 aa15.9■□□□□ 0.14
NUP50-219ENST00000497960 PABPC1P11940 636 aaKnown RBP15.9■□□□□ 0.14
NUP50-219ENST00000497960 HLA-FP30511 346 aa15.9■□□□□ 0.14
NUP50-219ENST00000497960 SLC6A4P31645 630 aa15.9■□□□□ 0.14
NUP50-219ENST00000497960 DHPSP49366 369 aaPredicted RBP15.9■□□□□ 0.14
NUP50-219ENST00000497960 TAF5Q15542 800 aa15.9■□□□□ 0.14
NUP50-219ENST00000497960 CCDC6Q16204 474 aa15.9■□□□□ 0.14
NUP50-219ENST00000497960 MAP7D1Q3KQU3 841 aa15.9■□□□□ 0.14
NUP50-219ENST00000497960 AASDHQ4L235 1098 aaPredicted RBP15.9■□□□□ 0.14
NUP50-219ENST00000497960 ZC3H12AQ5D1E8 599 aaKnown RBP15.9■□□□□ 0.14
NUP50-219ENST00000497960 NADSYN1Q6IA69 706 aa15.9■□□□□ 0.14
NUP50-219ENST00000497960 FAM183BPQ6ZVS7 135 aa15.9■□□□□ 0.14
NUP50-219ENST00000497960 ZDHHC17Q8IUH5 632 aa15.9■□□□□ 0.14
NUP50-219ENST00000497960 DEFB106AQ8N104 65 aa15.9■□□□□ 0.14
NUP50-219ENST00000497960 AHI1Q8N157 1196 aa15.9■□□□□ 0.14
NUP50-219ENST00000497960 NETO1Q8TDF5 533 aa15.9■□□□□ 0.14
NUP50-219ENST00000497960 RNF34Q969K3 372 aa15.9■□□□□ 0.14
NUP50-219ENST00000497960 ERLEC1Q96DZ1 483 aa15.9■□□□□ 0.14
NUP50-219ENST00000497960 SLC2A13Q96QE2 648 aa15.9■□□□□ 0.14
NUP50-219ENST00000497960 ABCB8Q9NUT2 735 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms