RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 A0A1W2PPE2 198 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 A0A1W2PR64 198 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 E9PLN8 166 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 PIK3R2O00459 728 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 NDC80O14777 642 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 SYN3O14994 580 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 DCLK1O15075 740 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 WDR46O15213 610 aaKnown RBP6.45□□□□□ -1.38
BRCA1-224ENST00000497488 ASAP2O43150 1006 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 KINO60870 393 aaKnown RBP6.45□□□□□ -1.38
BRCA1-224ENST00000497488 FTCDO95954 541 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 URODP06132 367 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 ACP5P13686 325 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 CHN1P15882 459 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 PTPN2P17706 415 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 LAG3P18627 525 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 CPT2P23786 658 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 PTAFRP25105 342 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 BMPR1AP36894 532 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 KIR2DL3P43628 341 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 NRIP1P48552 1158 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 YBX1P67809 324 aaKnown RBP6.45□□□□□ -1.38
BRCA1-224ENST00000497488 PRAMEP78395 509 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 MRPS5P82675 430 aaKnown RBP6.45□□□□□ -1.38
BRCA1-224ENST00000497488 PRR5P85299 388 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 PTH1RQ03431 593 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 YWHAHQ04917 246 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-224ENST00000497488 THOC5Q13769 683 aaKnown RBP6.45□□□□□ -1.38
BRCA1-224ENST00000497488 ADGRE1Q14246 886 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 MORF4L2Q15014 288 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 IQCB1Q15051 598 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 PPP2R5BQ15173 497 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 SLC9B1Q4ZJI4 515 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 NLRX1Q86UT6 975 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 ARHGEF25Q86VW2 580 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 LURAP1LQ8IV03 231 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 HSPH1Q92598 858 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 INTS12Q96CB8 462 aaKnown RBP6.45□□□□□ -1.38
BRCA1-224ENST00000497488 AK8Q96MA6 479 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 SLC46A1Q96NT5 459 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 DACH2Q96NX9 599 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 CD180Q99467 661 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 VKORC1Q9BQB6 163 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 PAAF1Q9BRP4 392 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 ZCWPW1Q9H0M4 648 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 TNMDQ9H2S6 317 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 BCAS3Q9H6U6 928 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 SH2D4AQ9H788 454 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 CARS2Q9HA77 564 aaKnown RBP6.45□□□□□ -1.38
BRCA1-224ENST00000497488 SPATS2LQ9NUQ6 558 aaKnown RBP6.45□□□□□ -1.38
BRCA1-224ENST00000497488 INTS10Q9NVR2 710 aaKnown RBP6.45□□□□□ -1.38
BRCA1-224ENST00000497488 ALKBH4Q9NXW9 302 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 MPP6Q9NZW5 540 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 CACNG4Q9UBN1 327 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 TMEM59LQ9UK28 342 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 CDC42EP3Q9UKI2 254 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 SHOC2Q9UQ13 582 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 VWA7Q9Y334 891 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 KIAA0556O60303 1618 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 PTPRGP23470 1445 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 LOC105369274A0A096LPK9 316 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 LOC102723532A0A0G2JNH3 316 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 GXYLT2A0PJZ3 443 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 TEX22C9J3V5 150 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 CD3EAPO15446 510 aaKnown RBP6.44□□□□□ -1.38
BRCA1-224ENST00000497488 HNRNPCL1O60812 293 aaKnown RBP6.44□□□□□ -1.38
BRCA1-224ENST00000497488 SEC22BO75396 215 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 PSMD10O75832 226 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 STAM2O75886 525 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 CAMTA2O94983 1202 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 GDF11O95390 407 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 C22orf31O95567 290 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 CFIP05156 583 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 DLDP09622 509 aaKnown RBP6.44□□□□□ -1.38
BRCA1-224ENST00000497488 SPATA31C1P0DKV0 1188 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 COX7A2P14406 83 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 MAPK3P27361 379 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-224ENST00000497488 COL8A1P27658 744 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 CD6P30203 668 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 CPA2P48052 419 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 MRPL12P52815 198 aaKnown RBP6.44□□□□□ -1.38
BRCA1-224ENST00000497488 FAM3BP58499 235 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-224ENST00000497488 YBEYP58557 167 aaPredicted RBP6.44□□□□□ -1.38
BRCA1-224ENST00000497488 OLR1P78380 273 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 TRIM29Q14134 588 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 SMU1Q2TAY7 513 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 MPP7Q5T2T1 576 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 SARM1Q6SZW1 724 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 MON1AQ86VX9 555 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 LDHDQ86WU2 507 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 ZDHHC14Q8IZN3 488 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 OR4N4Q8N0Y3 316 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 TMEM151AQ8N4L1 468 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 PLA2G15Q8NCC3 412 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 TMEM116Q8NCL8 245 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 SLC17A8Q8NDX2 589 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 PDZD8Q8NEN9 1154 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 TNIP2Q8NFZ5 429 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 KIF18AQ8NI77 898 aa6.44□□□□□ -1.38
BRCA1-224ENST00000497488 FIBINQ8TAL6 211 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms