RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 TMBIM6P55061 237 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 CACNB1Q02641 598 aaPredicted RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 NFATC3Q12968 1075 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 MMRN1Q13201 1228 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 ORC2Q13416 577 aaPredicted RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 TFDP1Q14186 410 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 TSC22D1Q15714 1073 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 CYP1B1Q16678 543 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 FGD3Q5JSP0 725 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 ARMC4Q5T2S8 1044 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 RBM20Q5T481 1227 aaKnown RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 FAM109AQ8N4B1 249 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 PLBD2Q8NHP8 589 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 SLC5A5Q92911 643 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 MRPL47Q9HD33 250 aaKnown RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 TUFT1Q9NNX1 390 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 CHST7Q9NS84 486 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 PACSIN3Q9UKS6 424 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 MYH2Q9UKX2 1941 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 SETD1AO15047 1707 aaKnown RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 TEX51A0A1B0GUA7 166 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 H3BMQ9 156 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 TBC1D4O60343 1298 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 TSC22D2O75157 780 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 PRKCBP05771 671 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 UGT2B4P06133 528 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 HPCAL1P37235 193 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 SEPHS1P49903 392 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 PKNOX1P55347 436 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 P2RX3P56373 397 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 PRKD1Q15139 912 aaPredicted RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 TRIM71Q2Q1W2 868 aaKnown RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 SNAP47Q5SQN1 464 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 CIAPIN1Q6FI81 312 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 CASC4Q6P4E1 433 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 IDO2Q6ZQW0 420 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 DGLUCYQ7Z3D6 616 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 ZC3H7AQ8IWR0 971 aaKnown RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 SAMD14Q8IZD0 417 aaPredicted RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 C12orf50Q8NA57 414 aaPredicted RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 DEPDC1BQ8WUY9 529 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 ARHGEF26Q96DR7 871 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 COG8Q96MW5 612 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 SEZ6LQ9BYH1 1024 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 SLA2Q9H6Q3 261 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 RPF2Q9H7B2 306 aaKnown RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 NUP50Q9UKX7 468 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 BAG5Q9UL15 447 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 TMCC3Q9ULS5 477 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 KIAA1024Q9UPX6 916 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 PCDHGA10Q9Y5H3 936 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 F8W810 466 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 SULT1C4O75897 302 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 C8BP07358 591 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 RALAP11233 206 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 NDST2P52849 883 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 PEX3P56589 373 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 CHRNDQ07001 517 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 NAB1Q13506 487 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 KLHL12Q53G59 568 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 SLC9A4Q6AI14 798 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 FOXR2Q6PJQ5 311 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 C16orf62Q7Z3J2 963 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 SYTL1Q8IYJ3 562 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 ZNF555Q8NEP9 628 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 ZSCAN18Q8TBC5 510 aaPredicted RBP8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 DGCR6LQ9BY27 220 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 ZBTB3Q9H5J0 574 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 COQ10BQ9H8M1 238 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 FBXO40Q9UH90 709 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 MKL2Q9ULH7 1088 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 ISPDA4D126 451 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 SLC16A3O15427 465 aaKnown RBP8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 ACSL4O60488 711 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 PLA2G4BP0C869 781 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 RALBP11234 206 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 PSMA4P25789 261 aaKnown RBP8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 ADSSP30520 456 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 ZNF76P36508 570 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 INPP1P49441 399 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 ARPP19P56211 112 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 NFE2L1Q14494 772 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 OXA1LQ15070 435 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 ANO4Q32M45 955 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 ARMCX4Q5H9R4 360 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 KIAA0408Q6ZU52 694 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 BRINP3Q76B58 766 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 RDH13Q8NBN7 331 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 LILRB1Q8NHL6 650 aaPredicted RBP8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 SLC30A5Q8TAD4 765 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 KAZALD1Q96I82 304 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 INTS2Q9H0H0 1204 aaKnown RBP8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 MTRRQ9UBK8 725 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 APEX2Q9UBZ4 518 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 TESMINQ9Y4I5 508 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 NRKQ7Z2Y5 1582 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 KRT87PA6NCN2 255 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 PRR23AA6NEV1 266 aa8.38□□□□□ -1.07
CRNKL1-205ENST00000496549 WDR64B1ANS9 1081 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms