RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 JOSD2Q8TAC2 188 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 NELL1Q92832 810 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 TBCBQ99426 244 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 RAB6CQ9H0N0 254 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 NUCKS1Q9H1E3 243 aaKnown RBP17.78■□□□□ 0.44
SNX17-209ENST00000494893 ZDHHC4Q9NPG8 344 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 PIGVQ9NUD9 493 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 SEPT11Q9NVA2 429 aaKnown RBP17.78■□□□□ 0.44
SNX17-209ENST00000494893 ADAM22Q9P0K1 906 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 COX16Q9P0S2 106 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 FBXO4Q9UKT5 387 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.77■□□□□ 0.44
SNX17-209ENST00000494893 M0QYT0 321 aa17.77■□□□□ 0.44
SNX17-209ENST00000494893 PAPSS2O95340 614 aaPredicted RBP17.77■□□□□ 0.44
SNX17-209ENST00000494893 CCDC172P0C7W6 258 aa17.77■□□□□ 0.44
SNX17-209ENST00000494893 ATXN1P54253 815 aaKnown RBP17.77■□□□□ 0.44
SNX17-209ENST00000494893 CSTF1Q05048 431 aaKnown RBP17.77■□□□□ 0.44
SNX17-209ENST00000494893 ACAD10Q6JQN1 1059 aa17.77■□□□□ 0.44
SNX17-209ENST00000494893 ARCQ7LC44 396 aa17.77■□□□□ 0.44
SNX17-209ENST00000494893 LRRC8AQ8IWT6 810 aa17.77■□□□□ 0.44
SNX17-209ENST00000494893 OR8K1Q8NGG5 319 aa17.77■□□□□ 0.44
SNX17-209ENST00000494893 WFDC5Q8TCV5 224 aa17.77■□□□□ 0.44
SNX17-209ENST00000494893 EXOC4Q96A65 974 aa17.77■□□□□ 0.44
SNX17-209ENST00000494893 XPO6Q96QU8 1125 aaKnown RBP17.77■□□□□ 0.44
SNX17-209ENST00000494893 PANX2Q96RD6 677 aa17.77■□□□□ 0.44
SNX17-209ENST00000494893 PRMT1Q99873 361 aaKnown RBP17.77■□□□□ 0.44
SNX17-209ENST00000494893 PLEKP08567 350 aaPredicted RBP17.76■□□□□ 0.43
SNX17-209ENST00000494893 HNRNPLP14866 589 aaKnown RBP eCLIP17.76■□□□□ 0.43
SNX17-209ENST00000494893 TNFAIP3P21580 790 aa17.76■□□□□ 0.43
SNX17-209ENST00000494893 TNFRSF4P43489 277 aa17.76■□□□□ 0.43
SNX17-209ENST00000494893 CXCL12P48061 93 aa17.76■□□□□ 0.43
SNX17-209ENST00000494893 SLC11A2P49281 568 aa17.76■□□□□ 0.43
SNX17-209ENST00000494893 DGKGP49619 791 aa17.76■□□□□ 0.43
SNX17-209ENST00000494893 CXCR3P49682 368 aa17.76■□□□□ 0.43
SNX17-209ENST00000494893 SULT1E1P49888 294 aa17.76■□□□□ 0.43
SNX17-209ENST00000494893 CCR3P51677 355 aa17.76■□□□□ 0.43
SNX17-209ENST00000494893 C1QBPQ07021 282 aaKnown RBP17.76■□□□□ 0.43
SNX17-209ENST00000494893 DMWDQ09019 674 aa17.76■□□□□ 0.43
SNX17-209ENST00000494893 KLHL30Q0D2K2 578 aa17.76■□□□□ 0.43
SNX17-209ENST00000494893 NME3Q13232 169 aa17.76■□□□□ 0.43
SNX17-209ENST00000494893 SLC25A52Q3SY17 297 aa17.76■□□□□ 0.43
SNX17-209ENST00000494893 MPPE1Q53F39 396 aa17.76■□□□□ 0.43
SNX17-209ENST00000494893 HS1BP3Q53T59 392 aa17.76■□□□□ 0.43
SNX17-209ENST00000494893 C2orf27AQ580R0 203 aa17.76■□□□□ 0.43
SNX17-209ENST00000494893 ARTNQ5T4W7 220 aa17.76■□□□□ 0.43
SNX17-209ENST00000494893 MCOLN2Q8IZK6 566 aa17.76■□□□□ 0.43
SNX17-209ENST00000494893 DDI1Q8WTU0 396 aa17.76■□□□□ 0.43
SNX17-209ENST00000494893 SYN2Q92777 582 aaPredicted RBP17.76■□□□□ 0.43
SNX17-209ENST00000494893 PGAP3Q96FM1 320 aaPredicted RBP17.76■□□□□ 0.43
SNX17-209ENST00000494893 CFAP57Q96MR6 1250 aa17.76■□□□□ 0.43
SNX17-209ENST00000494893 DNAJC7Q99615 494 aa17.76■□□□□ 0.43
SNX17-209ENST00000494893 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.76■□□□□ 0.43
SNX17-209ENST00000494893 RRN3Q9NYV6 651 aa17.76■□□□□ 0.43
SNX17-209ENST00000494893 SLC27A6Q9Y2P4 619 aa17.76■□□□□ 0.43
SNX17-209ENST00000494893 TBC1D3BA6NDS4 549 aa17.75■□□□□ 0.43
SNX17-209ENST00000494893 C2CD4BA6NLJ0 364 aa17.75■□□□□ 0.43
SNX17-209ENST00000494893 APOEP02649 317 aa17.75■□□□□ 0.43
SNX17-209ENST00000494893 CYBBP04839 570 aa17.75■□□□□ 0.43
SNX17-209ENST00000494893 RPS24P62847 133 aaKnown RBP17.75■□□□□ 0.43
SNX17-209ENST00000494893 PPP2R5DQ14738 602 aa17.75■□□□□ 0.43
SNX17-209ENST00000494893 GEN1Q17RS7 908 aa17.75■□□□□ 0.43
SNX17-209ENST00000494893 MS4A13Q5J8X5 152 aa17.75■□□□□ 0.43
SNX17-209ENST00000494893 PPP1R15BQ5SWA1 713 aa17.75■□□□□ 0.43
SNX17-209ENST00000494893 C10orf76Q5T2E6 689 aa17.75■□□□□ 0.43
SNX17-209ENST00000494893 SH3PXD2AQ5TCZ1 1133 aa17.75■□□□□ 0.43
SNX17-209ENST00000494893 RAP1GAP2Q684P5 730 aa17.75■□□□□ 0.43
SNX17-209ENST00000494893 IL17RCQ8NAC3 791 aa17.75■□□□□ 0.43
SNX17-209ENST00000494893 C3orf20Q8ND61 904 aa17.75■□□□□ 0.43
SNX17-209ENST00000494893 ATOH1Q92858 354 aaPredicted RBP17.75■□□□□ 0.43
SNX17-209ENST00000494893 TMA16Q96EY4 203 aaKnown RBP17.75■□□□□ 0.43
SNX17-209ENST00000494893 BTN2A3PQ96KV6 586 aa17.75■□□□□ 0.43
SNX17-209ENST00000494893 TMPRSS4Q9NRS4 437 aa17.75■□□□□ 0.43
SNX17-209ENST00000494893 ABHD10Q9NUJ1 306 aa17.75■□□□□ 0.43
SNX17-209ENST00000494893 TMCO5BA8MYB1 307 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 TBL1XO60907 577 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 ADAM23O75077 832 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 ENDOD1O94919 500 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 CALB1P05937 261 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 TACR2P21452 398 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 RRM1P23921 792 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 HNRNPH3P31942 346 aaKnown RBP17.74■□□□□ 0.43
SNX17-209ENST00000494893 CCR1P32246 355 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 GBP1P32455 592 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 RFC1P35251 1148 aaPredicted RBP17.74■□□□□ 0.43
SNX17-209ENST00000494893 TIE1P35590 1138 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 GGCXP38435 758 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 TSR1Q2NL82 804 aaKnown RBP17.74■□□□□ 0.43
SNX17-209ENST00000494893 C15orf59Q2T9L4 293 aaPredicted RBP17.74■□□□□ 0.43
SNX17-209ENST00000494893 ZNF528Q3MIS6 628 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 CCDC14Q49A88 953 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 EGFLAMQ63HQ2 1017 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 TMEM215Q68D42 235 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 CCDC33Q8N5R6 958 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 ALLCQ8N6M5 410 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 ATP6V0D2Q8N8Y2 350 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 RXFP2Q8WXD0 754 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 TRIM44Q96DX7 344 aaPredicted RBP17.74■□□□□ 0.43
SNX17-209ENST00000494893 LMLNQ96KR4 655 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 ACOX2Q99424 681 aa17.74■□□□□ 0.43
SNX17-209ENST00000494893 IRX2Q9BZI1 471 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms