RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 ABCB8Q9NUT2 735 aa34.49■■■■□ 3.11
CBX4-203ENST00000494546 STIM2Q9P246 746 aa34.49■■■■□ 3.11
CBX4-203ENST00000494546 NPC1O15118 1278 aa34.48■■■■□ 3.11
CBX4-203ENST00000494546 TIMM44O43615 452 aa34.48■■■■□ 3.11
CBX4-203ENST00000494546 GRAP2O75791 330 aa34.48■■■■□ 3.11
CBX4-203ENST00000494546 APOEP02649 317 aa34.48■■■■□ 3.11
CBX4-203ENST00000494546 ERBB2P04626 1255 aa34.48■■■■□ 3.11
CBX4-203ENST00000494546 SNX16P57768 344 aa34.48■■■■□ 3.11
CBX4-203ENST00000494546 PITX1P78337 314 aaPredicted RBP34.48■■■■□ 3.11
CBX4-203ENST00000494546 MYL5Q02045 173 aa34.48■■■■□ 3.11
CBX4-203ENST00000494546 AASDHQ4L235 1098 aaPredicted RBP34.48■■■■□ 3.11
CBX4-203ENST00000494546 ZC3H12AQ5D1E8 599 aaKnown RBP34.48■■■■□ 3.11
CBX4-203ENST00000494546 PLA2G2CQ5R387 149 aa34.48■■■■□ 3.11
CBX4-203ENST00000494546 FKBP15Q5T1M5 1219 aa34.48■■■■□ 3.11
CBX4-203ENST00000494546 DEFB106AQ8N104 65 aa34.48■■■■□ 3.11
CBX4-203ENST00000494546 STK33Q9BYT3 514 aa34.48■■■■□ 3.11
CBX4-203ENST00000494546 IRX2Q9BZI1 471 aaPredicted RBP34.48■■■■□ 3.11
CBX4-203ENST00000494546 ASNSD1Q9NWL6 643 aa34.48■■■■□ 3.11
CBX4-203ENST00000494546 MBD1Q9UIS9 605 aaPredicted RBP34.48■■■■□ 3.11
CBX4-203ENST00000494546 BCLAF3A2AJT9 711 aaKnown RBP34.47■■■■□ 3.11
CBX4-203ENST00000494546 GLI1P08151 1106 aa34.47■■■■□ 3.11
CBX4-203ENST00000494546 KLK7P49862 253 aa34.47■■■■□ 3.11
CBX4-203ENST00000494546 CDK17Q00537 523 aa34.47■■■■□ 3.11
CBX4-203ENST00000494546 ZNF234Q14588 700 aa34.47■■■■□ 3.11
CBX4-203ENST00000494546 E2F5Q15329 346 aa34.47■■■■□ 3.11
CBX4-203ENST00000494546 PTPN20Q4JDL3 420 aa34.47■■■■□ 3.11
CBX4-203ENST00000494546 MPP7Q5T2T1 576 aa34.47■■■■□ 3.11
CBX4-203ENST00000494546 TAF3Q5VWG9 929 aa34.47■■■■□ 3.11
CBX4-203ENST00000494546 CHST9Q7L1S5 443 aa34.47■■■■□ 3.11
CBX4-203ENST00000494546 LPCAT2Q7L5N7 544 aa34.47■■■■□ 3.11
CBX4-203ENST00000494546 DGLUCYQ7Z3D6 616 aa34.47■■■■□ 3.11
CBX4-203ENST00000494546 HJURPQ8NCD3 748 aaPredicted RBP34.47■■■■□ 3.11
CBX4-203ENST00000494546 NETO1Q8TDF5 533 aa34.47■■■■□ 3.11
CBX4-203ENST00000494546 WFIKKN2Q8TEU8 576 aa34.47■■■■□ 3.11
CBX4-203ENST00000494546 NUCKS1Q9H1E3 243 aaKnown RBP34.47■■■■□ 3.11
CBX4-203ENST00000494546 SLC6A17Q9H1V8 727 aa34.47■■■■□ 3.11
CBX4-203ENST00000494546 FAM204AQ9H8W3 233 aa34.47■■■■□ 3.11
CBX4-203ENST00000494546 VPS45Q9NRW7 570 aa34.47■■■■□ 3.11
CBX4-203ENST00000494546 XPO7Q9UIA9 1087 aaKnown RBP34.47■■■■□ 3.11
CBX4-203ENST00000494546 GGA2Q9UJY4 613 aa34.47■■■■□ 3.11
CBX4-203ENST00000494546 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa34.46■■■■□ 3.11
CBX4-203ENST00000494546 TYW5A2RUC4 315 aaKnown RBP34.46■■■■□ 3.11
CBX4-203ENST00000494546 GDF9O60383 454 aa34.46■■■■□ 3.11
CBX4-203ENST00000494546 HSF2BPO75031 334 aa34.46■■■■□ 3.11
CBX4-203ENST00000494546 TMEFF1Q8IYR6 380 aa34.46■■■■□ 3.11
CBX4-203ENST00000494546 TMEM35BQ8NCS4 154 aa34.46■■■■□ 3.11
CBX4-203ENST00000494546 ANKRD20A12PQ8NF67 263 aa34.46■■■■□ 3.11
CBX4-203ENST00000494546 WFDC5Q8TCV5 224 aa34.46■■■■□ 3.11
CBX4-203ENST00000494546 PRICKLE1Q96MT3 831 aaPredicted RBP34.46■■■■□ 3.11
CBX4-203ENST00000494546 SLC2A13Q96QE2 648 aa34.46■■■■□ 3.11
CBX4-203ENST00000494546 ABCA7Q8IZY2 2146 aa34.46■■■■□ 3.11
CBX4-203ENST00000494546 SYNJ2BP-COX16A0A087WUM0 186 aa34.45■■■■□ 3.11
CBX4-203ENST00000494546 F8VZ95 297 aa34.45■■■■□ 3.11
CBX4-203ENST00000494546 SYNCRIPO60506 623 aaKnown RBP34.45■■■■□ 3.11
CBX4-203ENST00000494546 CAVIN2O95810 425 aa34.45■■■■□ 3.11
CBX4-203ENST00000494546 IGLV3-25P01717 112 aa34.45■■■■□ 3.11
CBX4-203ENST00000494546 PABPC1P11940 636 aaKnown RBP34.45■■■■□ 3.11
CBX4-203ENST00000494546 ATXN1P54253 815 aaKnown RBP34.45■■■■□ 3.11
CBX4-203ENST00000494546 RPS24P62847 133 aaKnown RBP34.45■■■■□ 3.11
CBX4-203ENST00000494546 ENPP2Q13822 863 aa34.45■■■■□ 3.11
CBX4-203ENST00000494546 FUT11Q495W5 492 aa34.45■■■■□ 3.11
CBX4-203ENST00000494546 OLFML1Q6UWY5 402 aa34.45■■■■□ 3.11
CBX4-203ENST00000494546 ARMCX6Q7L4S7 300 aa34.45■■■■□ 3.11
CBX4-203ENST00000494546 ERMP1Q7Z2K6 904 aa34.45■■■■□ 3.11
CBX4-203ENST00000494546 CYP2U1Q7Z449 544 aa34.45■■■■□ 3.11
CBX4-203ENST00000494546 MFN1Q8IWA4 741 aa34.45■■■■□ 3.11
CBX4-203ENST00000494546 MYEOVQ96EZ4 313 aa34.45■■■■□ 3.11
CBX4-203ENST00000494546 MRGPRX1Q96LB2 322 aa34.45■■■■□ 3.11
CBX4-203ENST00000494546 GANQ9H2C0 597 aa34.45■■■■□ 3.11
CBX4-203ENST00000494546 FAM207AQ9NSI2 230 aaPredicted RBP34.45■■■■□ 3.11
CBX4-203ENST00000494546 COX16Q9P0S2 106 aa34.45■■■■□ 3.11
CBX4-203ENST00000494546 FAM170AA1A519 330 aa34.44■■■■□ 3.1
CBX4-203ENST00000494546 COPB1P53618 953 aaKnown RBP34.44■■■■□ 3.1
CBX4-203ENST00000494546 SLC6A3Q01959 620 aa34.44■■■■□ 3.1
CBX4-203ENST00000494546 MS4A13Q5J8X5 152 aa34.44■■■■□ 3.1
CBX4-203ENST00000494546 KIAA1324Q6UXG2 1013 aaKnown RBP34.44■■■■□ 3.1
CBX4-203ENST00000494546 SERPINA13PQ6UXR4 307 aa34.44■■■■□ 3.1
CBX4-203ENST00000494546 AHI1Q8N157 1196 aa34.44■■■■□ 3.1
CBX4-203ENST00000494546 DDX51Q8N8A6 666 aaKnown RBP eCLIP34.44■■■■□ 3.11e-10■■■■□ 20.7
CBX4-203ENST00000494546 CYB5D2Q8WUJ1 264 aa34.44■■■■□ 3.1
CBX4-203ENST00000494546 DDIT4Q9NX09 232 aa34.44■■■■□ 3.1
CBX4-203ENST00000494546 TMEM63CQ9P1W3 806 aa34.44■■■■□ 3.1
CBX4-203ENST00000494546 CYP8B1Q9UNU6 501 aa34.44■■■■□ 3.1
CBX4-203ENST00000494546 CEP250Q9BV73 2442 aa34.44■■■■□ 3.1
CBX4-203ENST00000494546 THADAQ6YHU6 1953 aa34.43■■■■□ 3.1
CBX4-203ENST00000494546 PRKCHP24723 683 aa34.43■■■■□ 3.1
CBX4-203ENST00000494546 POLR2FP61218 127 aaKnown RBP34.43■■■■□ 3.1
CBX4-203ENST00000494546 RAP1GAP2Q684P5 730 aa34.43■■■■□ 3.1
CBX4-203ENST00000494546 TCEAL6Q6IPX3 200 aa34.43■■■■□ 3.1
CBX4-203ENST00000494546 NOP9Q86U38 636 aaKnown RBP34.43■■■■□ 3.1
CBX4-203ENST00000494546 ADIPOR2Q86V24 386 aa34.43■■■■□ 3.1
CBX4-203ENST00000494546 CHSY1Q86X52 802 aa34.43■■■■□ 3.1
CBX4-203ENST00000494546 CFAP52Q8N1V2 620 aa34.43■■■■□ 3.1
CBX4-203ENST00000494546 CARNMT1Q8N4J0 409 aa34.43■■■■□ 3.1
CBX4-203ENST00000494546 TCEAL3Q969E4 200 aa34.43■■■■□ 3.1
CBX4-203ENST00000494546 BTN2A3PQ96KV6 586 aa34.43■■■■□ 3.1
CBX4-203ENST00000494546 SLTMQ9NWH9 1034 aaKnown RBP eCLIP34.43■■■■□ 3.13e-8■■■■■ 30.4
CBX4-203ENST00000494546 DCHS1Q96JQ0 3298 aa34.42■■■■□ 3.1
CBX4-203ENST00000494546 ZNF217O75362 1048 aa34.42■■■■□ 3.1
CBX4-203ENST00000494546 CDK11BP21127 795 aaKnown RBP34.42■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms