RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 DNAJC17Q9NVM6 304 aaKnown RBP12.93□□□□□ -0.34
TRA2A-209ENST00000494255 PLK2Q9NYY3 685 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 DEC1Q9P2X7 70 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 GOLGA6L7A0A1B0GV03 622 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 F5H5T6 163 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 PENKP01210 267 aaPredicted RBP12.93□□□□□ -0.34
TRA2A-209ENST00000494255 APODP05090 189 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 DCNP07585 359 aaKnown RBP12.93□□□□□ -0.34
TRA2A-209ENST00000494255 AVPR2P30518 371 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 MAGEA9P43362 315 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 SLC6A11P48066 632 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 GALCP54803 685 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 KDSRQ06136 332 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 FAM133BQ5BKY9 247 aaKnown RBP12.93□□□□□ -0.34
TRA2A-209ENST00000494255 FYB2Q5VWT5 728 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 RAP1GAP2Q684P5 730 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 NADSYN1Q6IA69 706 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 GRAMD4Q6IC98 578 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 C12orf40Q86WS4 652 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 ETFBKMTQ8IXQ9 262 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 LGI2Q8N0V4 545 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 HJURPQ8NCD3 748 aaPredicted RBP12.93□□□□□ -0.34
TRA2A-209ENST00000494255 FAM172AQ8WUF8 416 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 CTNNBL1Q8WYA6 563 aaPredicted RBP12.93□□□□□ -0.34
TRA2A-209ENST00000494255 TKTL2Q9H0I9 626 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 THAP2Q9H0W7 228 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 LMAN1LQ9HAT1 526 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 ARHGEF4Q9NR80 690 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 ARHGEF38Q9NXL2 777 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 CALCOCO1Q9P1Z2 691 aa12.93□□□□□ -0.34
TRA2A-209ENST00000494255 XPO7Q9UIA9 1087 aaKnown RBP12.93□□□□□ -0.34
TRA2A-209ENST00000494255 PI15O43692 258 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 TBL1XO60907 577 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 TULP3O75386 442 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 PAGE1O75459 146 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 ENDOD1O94919 500 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 H2AFZP0C0S5 128 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 TACR2P21452 398 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 PSMA2P25787 234 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 SLC6A4P31645 630 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 DGKGP49619 791 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 ARL13BQ3SXY8 428 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 FBXO43Q4G163 708 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 MS4A13Q5J8X5 152 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 ACBD5Q5T8D3 534 aaPredicted RBP12.92□□□□□ -0.34
TRA2A-209ENST00000494255 PIK3R6Q5UE93 754 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 NAIF1Q69YI7 327 aaPredicted RBP12.92□□□□□ -0.34
TRA2A-209ENST00000494255 FSTL4Q6MZW2 842 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 H2AFVQ71UI9 128 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 BNIPLQ7Z465 357 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 FAM131BQ86XD5 332 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 CCDC117Q8IWD4 279 aaPredicted RBP12.92□□□□□ -0.34
TRA2A-209ENST00000494255 CCDC26Q8TAB7 109 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 CENPIQ92674 756 aaPredicted RBP12.92□□□□□ -0.34
TRA2A-209ENST00000494255 CLDN23Q96B33 292 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 SIK2Q9H0K1 926 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 GRPEL1Q9HAV7 217 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 SPTLC3Q9NUV7 552 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 NENFQ9UMX5 172 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 F5P12259 2224 aa12.92□□□□□ -0.34
TRA2A-209ENST00000494255 KIAA1549LQ6ZVL6 1849 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 CUL9Q8IWT3 2517 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 TMEM191CA6NGB0 347 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 GFRA2O00451 464 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 CCP110O43303 1012 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 KAT7O95251 611 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 EGFP01133 1207 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 CYP1A2P05177 515 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 CHRNB1P11230 501 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 CYLC1P35663 651 aaPredicted RBP12.91□□□□□ -0.34
TRA2A-209ENST00000494255 GRIA2P42262 883 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 RPS9P46781 194 aaKnown RBP12.91□□□□□ -0.34
TRA2A-209ENST00000494255 ATXN1P54253 815 aaKnown RBP12.91□□□□□ -0.34
TRA2A-209ENST00000494255 CCINQ13939 588 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 RABGAP1LQ5R372 815 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 MPP7Q5T2T1 576 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 SH3PXD2AQ5TCZ1 1133 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 TMTC1Q8IUR5 882 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 CCDC170Q8IYT3 715 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 ZNF687Q8N1G0 1237 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 SYNPOQ8N3V7 929 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 TMEM105Q8N8V8 129 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 FNIP1Q8TF40 1166 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 NUP85Q9BW27 656 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 SLC2A11Q9BYW1 496 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 FBRSL1Q9HCM7 1045 aaKnown RBP12.91□□□□□ -0.34
TRA2A-209ENST00000494255 STIM2Q9P246 746 aa12.91□□□□□ -0.34
TRA2A-209ENST00000494255 TBC1D3BA6NDS4 549 aa12.9□□□□□ -0.34
TRA2A-209ENST00000494255 RNF8O76064 485 aa12.9□□□□□ -0.34
TRA2A-209ENST00000494255 HOXD9P28356 352 aaPredicted RBP12.9□□□□□ -0.34
TRA2A-209ENST00000494255 HDAC4P56524 1084 aa12.9□□□□□ -0.34
TRA2A-209ENST00000494255 C10orf76Q5T2E6 689 aa12.9□□□□□ -0.34
TRA2A-209ENST00000494255 TTC39BQ5VTQ0 682 aaPredicted RBP12.9□□□□□ -0.34
TRA2A-209ENST00000494255 SCYL2Q6P3W7 929 aa12.9□□□□□ -0.34
TRA2A-209ENST00000494255 ZNF557Q8N988 423 aaPredicted RBP12.9□□□□□ -0.34
TRA2A-209ENST00000494255 PRICKLE1Q96MT3 831 aaPredicted RBP12.9□□□□□ -0.34
TRA2A-209ENST00000494255 HAPLN3Q96S86 360 aa12.9□□□□□ -0.34
TRA2A-209ENST00000494255 NCAPGQ9BPX3 1015 aa12.9□□□□□ -0.34
TRA2A-209ENST00000494255 IER2Q9BTL4 223 aa12.9□□□□□ -0.34
TRA2A-209ENST00000494255 CHRDQ9H2X0 955 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms