RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 ATG4AQ8WYN0 398 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 FCRL2Q96LA5 508 aaPredicted RBP14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 RUNDC3BQ96NL0 473 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 CSPG4P5Q96PW8 444 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 HAPLN3Q96S86 360 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 OR12D3Q9UGF7 316 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 AMACRQ9UHK6 382 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 KCNU1A8MYU2 1149 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 APOC4-APOC2K7ER74 178 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 APOL1O14791 398 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 PER2O15055 1255 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 CCL16O15467 120 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 COCHO43405 550 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 APOEP02649 317 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 APOC2P02655 101 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 F11P03951 625 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 EPCAMP16422 314 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 HOXA9P31269 272 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 COILP38432 576 aaPredicted RBP14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 LMAN1P49257 510 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 RING1Q06587 406 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 SEMA3BQ13214 749 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 ELMSAN1Q6PJG2 1045 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 TMEM150AQ86TG1 271 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 RBM23Q86U06 439 aaKnown RBP14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 HAUS1Q96CS2 278 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 EPAS1Q99814 870 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 OSBPL2Q9H1P3 480 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 IL21Q9HBE4 155 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 PCYOX1Q9UHG3 505 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 HBS1LQ9Y450 684 aaKnown RBP14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 REV3LO60673 3130 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 EYSQ5T1H1 3165 aa14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 EEF2KO00418 725 aaKnown RBP14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 RAD51CO43502 376 aa14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 PAGE1O75459 146 aa14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 SYF2O95926 243 aaKnown RBP14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 OAS1P00973 400 aaKnown RBP14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 ZFXP17010 805 aaPredicted RBP14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 IGFBP4P22692 258 aa14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 GABRR2P28476 465 aa14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 TPI1P60174 286 aa14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 MRPS25P82663 173 aaKnown RBP14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 DR1Q01658 176 aa14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 SNX1Q13596 522 aa14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 DHX34Q14147 1143 aaKnown RBP14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 SLC9A4Q6AI14 798 aa14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 TTC27Q6P3X3 843 aa14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 ADGRD2Q7Z7M1 963 aa14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 TMC8Q8IU68 726 aa14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 CCDC105Q8IYK2 499 aa14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 PQLC3Q8N755 202 aa14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 ACTL9Q8TC94 416 aa14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 AENQ8WTP8 325 aaKnown RBP14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 LRRC3Q9BY71 257 aa14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 FRMD8P1Q9BZ68 369 aaPredicted RBP14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 SIK2Q9H0K1 926 aa14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 TLE6Q9H808 572 aa14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 PRDM16Q9HAZ2 1276 aa14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 ASAH2Q9NR71 780 aa14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 SLC12A6Q9UHW9 1150 aa14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 HCFC2Q9Y5Z7 792 aa14.56□□□□□ -0.08
PDZRN3-210ENST00000492909 DOCK6Q96HP0 2047 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 C2orf78A6NCI8 922 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 FAM72CH0Y354 149 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 DAPK3O43293 454 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 RFPL2O75678 378 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 MOCS2O96007 188 aaPredicted RBP14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 IGLV3-27P01718 113 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 HNRNPA1P09651 372 aaKnown RBP eCLIP14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 MYBL2P10244 700 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 TGM2P21980 687 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 CDC25CP30307 473 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 HCAR3P49019 387 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 COG7P83436 770 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 OTUD4Q01804 1114 aaKnown RBP14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 FAM72AQ5TYM5 149 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 NUGGCQ68CJ6 796 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 FAM72DQ6L9T8 149 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 DRICH1Q6PGQ1 229 aaPredicted RBP14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 RFX8Q6ZV50 586 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 FAM72BQ86X60 149 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 HS6ST3Q8IZP7 471 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 PLD5Q8N7P1 536 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 ATP6V0D2Q8N8Y2 350 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 MRPS31Q92665 395 aaKnown RBP14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 P3H4Q92791 437 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 FAM118BQ9BPY3 351 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 CORO1BQ9BR76 489 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 ARHGEF4Q9NR80 690 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 SAE1Q9UBE0 346 aaPredicted RBP14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 FEZ2Q9UHY8 353 aaPredicted RBP14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 TTI1O43156 1089 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 LIASO43766 372 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 XYLBO75191 536 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 LRIG2O94898 1065 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 HMBSP08397 361 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 AMPD1P23109 780 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 TNFRSF8P28908 595 aa14.55□□□□□ -0.08
PDZRN3-210ENST00000492909 KCNJ1P48048 391 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms