RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 RFPL2O75678 378 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 ENDOD1O94919 500 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 FGF19O95750 216 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 IFNB1P01574 187 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 IGLV3-25P01717 112 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 APOC2P02655 101 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 HNRNPA1P09651 372 aaKnown RBP eCLIP8.31□□□□□ -1.08
FDPS-218ENST00000492887 ZDHHC11BP0C7U3 371 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 GJA1P17302 382 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 PTPN2P17706 415 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 EPHB2P29323 1055 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 CORO1AP31146 461 aaKnown RBP8.31□□□□□ -1.08
FDPS-218ENST00000492887 SERPINB6P35237 376 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 KCNJ1P48048 391 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 FNTAP49354 379 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 HARS2P49590 506 aaKnown RBP8.31□□□□□ -1.08
FDPS-218ENST00000492887 VPS41P49754 854 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 ZNF135P52742 658 aaPredicted RBP8.31□□□□□ -1.08
FDPS-218ENST00000492887 EIF3EP60228 445 aaKnown RBP8.31□□□□□ -1.08
FDPS-218ENST00000492887 COG7P83436 770 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 GUCY2DQ02846 1103 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 LMNB2Q03252 620 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 SCAPQ12770 1279 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 NNTQ13423 1086 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 DHX34Q14147 1143 aaKnown RBP8.31□□□□□ -1.08
FDPS-218ENST00000492887 HLTFQ14527 1009 aaKnown RBP eCLIP8.31□□□□□ -1.08
FDPS-218ENST00000492887 DUSP6Q16828 381 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 GPR158Q5T848 1215 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 RAP1GAP2Q684P5 730 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 TMCO3Q6UWJ1 677 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 BBS12Q6ZW61 710 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 CYP4V2Q6ZWL3 525 aaPredicted RBP8.31□□□□□ -1.08
FDPS-218ENST00000492887 ANKS1BQ7Z6G8 1248 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 ZC3H18Q86VM9 953 aaKnown RBP8.31□□□□□ -1.08
FDPS-218ENST00000492887 CDKL3Q8IVW4 592 aaPredicted RBP8.31□□□□□ -1.08
FDPS-218ENST00000492887 UNC45BQ8IWX7 931 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 GPR161Q8N6U8 529 aaKnown RBP8.31□□□□□ -1.08
FDPS-218ENST00000492887 ARL14EPQ8N8R7 260 aaPredicted RBP8.31□□□□□ -1.08
FDPS-218ENST00000492887 MAB21L3Q8N8X9 362 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 PRELID2Q8N945 189 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 ACTL9Q8TC94 416 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 SMG7Q92540 1137 aaKnown RBP8.31□□□□□ -1.08
FDPS-218ENST00000492887 TSC1Q92574 1164 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 NT5C3BQ969T7 300 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 PLD4Q96BZ4 506 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 FCRL2Q96LA5 508 aaPredicted RBP8.31□□□□□ -1.08
FDPS-218ENST00000492887 CSPG4P5Q96PW8 444 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 FERMT1Q9BQL6 677 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 HERPUD2Q9BSE4 406 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 MAGEB5Q9BZ81 275 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 DPH5Q9H2P9 285 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 SFXN1Q9H9B4 322 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 HCFC1R1Q9NWW0 138 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 ARHGEF38Q9NXL2 777 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 CWC15Q9P013 229 aaKnown RBP8.31□□□□□ -1.08
FDPS-218ENST00000492887 RCOR3Q9P2K3 495 aaPredicted RBP8.31□□□□□ -1.08
FDPS-218ENST00000492887 OR12D3Q9UGF7 316 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 VANGL2Q9ULK5 521 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 R3HDM2Q9Y2K5 976 aaKnown RBP8.31□□□□□ -1.08
FDPS-218ENST00000492887 HCFC2Q9Y5Z7 792 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 CEP290O15078 2479 aa8.31□□□□□ -1.08
FDPS-218ENST00000492887 CCDC195A0A1B0GUA6 201 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 FAM187AA6NFU0 413 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 EPOPA6NHQ4 379 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 C3orf70A6NLC5 250 aaPredicted RBP8.3□□□□□ -1.08
FDPS-218ENST00000492887 E9PAM4 449 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 PPP1R12AO14974 1030 aaPredicted RBP8.3□□□□□ -1.08
FDPS-218ENST00000492887 CTIFO43310 598 aaKnown RBP8.3□□□□□ -1.08
FDPS-218ENST00000492887 MFSD11O43934 449 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 ERLIN1O75477 346 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 NEBLO76041 1014 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 F11P03951 625 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 RHOP08100 348 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 RBP3P10745 1247 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 PECAM1P16284 738 aaPredicted RBP8.3□□□□□ -1.08
FDPS-218ENST00000492887 ERCC2P18074 760 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 HDCP19113 662 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 BMP8BP34820 402 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 GTF2F1P35269 517 aaKnown RBP eCLIP8.3□□□□□ -1.081e-13■■■□□ 15.9
FDPS-218ENST00000492887 TNNT3P45378 269 aaPredicted RBP8.3□□□□□ -1.08
FDPS-218ENST00000492887 SLC11A2P49281 568 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 TUBP50607 506 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 ARSEP51690 589 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 KLF1Q13351 362 aaPredicted RBP8.3□□□□□ -1.08
FDPS-218ENST00000492887 BYSLQ13895 437 aaKnown RBP8.3□□□□□ -1.08
FDPS-218ENST00000492887 SIX1Q15475 284 aaPredicted RBP8.3□□□□□ -1.08
FDPS-218ENST00000492887 TEAD2Q15562 447 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 CCNG2Q16589 344 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 GLE1Q53GS7 698 aaKnown RBP8.3□□□□□ -1.08
FDPS-218ENST00000492887 RARS2Q5T160 578 aaKnown RBP8.3□□□□□ -1.08
FDPS-218ENST00000492887 NCBP2-AS2Q69YL0 99 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 TXNDC8Q6A555 127 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 LILRA6Q6PI73 481 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 RFX8Q6ZV50 586 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 BZW1Q7L1Q6 419 aaKnown RBP8.3□□□□□ -1.08
FDPS-218ENST00000492887 BNIPLQ7Z465 357 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 GRASPQ7Z6J2 395 aaPredicted RBP8.3□□□□□ -1.08
FDPS-218ENST00000492887 VSIG1Q86XK7 387 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 JAMLQ86YT9 394 aa8.3□□□□□ -1.08
FDPS-218ENST00000492887 TMC8Q8IU68 726 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms