RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 CDK17Q00537 523 aa15.79■□□□□ 0.12
COL27A1-206ENST00000490831 SYCP1Q15431 976 aa15.79■□□□□ 0.12
COL27A1-206ENST00000490831 CSRP2Q16527 193 aa15.79■□□□□ 0.12
COL27A1-206ENST00000490831 ANO6Q4KMQ2 910 aa15.79■□□□□ 0.12
COL27A1-206ENST00000490831 DCAF6Q58WW2 860 aa15.79■□□□□ 0.12
COL27A1-206ENST00000490831 ZC3H12AQ5D1E8 599 aaKnown RBP15.79■□□□□ 0.12
COL27A1-206ENST00000490831 OR6B2Q6IFH4 312 aa15.79■□□□□ 0.12
COL27A1-206ENST00000490831 CAVIN1Q6NZI2 390 aaKnown RBP15.79■□□□□ 0.12
COL27A1-206ENST00000490831 RFWD3Q6PCD5 774 aa15.79■□□□□ 0.12
COL27A1-206ENST00000490831 DEFB106AQ8N104 65 aa15.79■□□□□ 0.12
COL27A1-206ENST00000490831 AOPEPQ8N6M6 819 aa15.79■□□□□ 0.12
COL27A1-206ENST00000490831 ZNF557Q8N988 423 aaPredicted RBP15.79■□□□□ 0.12
COL27A1-206ENST00000490831 WFIKKN2Q8TEU8 576 aa15.79■□□□□ 0.12
COL27A1-206ENST00000490831 LMLNQ96KR4 655 aa15.79■□□□□ 0.12
COL27A1-206ENST00000490831 BTN2A3PQ96KV6 586 aa15.79■□□□□ 0.12
COL27A1-206ENST00000490831 PRICKLE1Q96MT3 831 aaPredicted RBP15.79■□□□□ 0.12
COL27A1-206ENST00000490831 FUCA2Q9BTY2 467 aa15.79■□□□□ 0.12
COL27A1-206ENST00000490831 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.79■□□□□ 0.12
COL27A1-206ENST00000490831 CACNA2D2Q9NY47 1150 aa15.79■□□□□ 0.12
COL27A1-206ENST00000490831 KCNU1A8MYU2 1149 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 RHOBTB1O94844 696 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 APOEP02649 317 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 SLC2A3P11169 496 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 ATP1A3P13637 1013 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 CDK11BP21127 795 aaKnown RBP15.78■□□□□ 0.12
COL27A1-206ENST00000490831 NOS2P35228 1153 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 WASP42768 502 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 NOMO3P69849 1222 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 UBXN1Q04323 297 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 SPEM2Q0P670 501 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 ELF2Q15723 593 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 KLHL40Q2TBA0 621 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 MAP7D1Q3KQU3 841 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 MS4A13Q5J8X5 152 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 PMS2CLQ68D20 193 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 KIAA1211LQ6NV74 962 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 ADIPOR2Q86V24 386 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 DHX40Q8IX18 779 aaKnown RBP15.78■□□□□ 0.12
COL27A1-206ENST00000490831 HJURPQ8NCD3 748 aaPredicted RBP15.78■□□□□ 0.12
COL27A1-206ENST00000490831 HMGB4Q8WW32 186 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 NT5C3BQ969T7 300 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 MYEOVQ96EZ4 313 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 PRMT1Q99873 361 aaKnown RBP15.78■□□□□ 0.12
COL27A1-206ENST00000490831 NUCKS1Q9H1E3 243 aaKnown RBP15.78■□□□□ 0.12
COL27A1-206ENST00000490831 SYNCQ9H7C4 482 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 SEMA4GQ9NTN9 838 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 RRN3Q9NYV6 651 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 XPO7Q9UIA9 1087 aaKnown RBP15.78■□□□□ 0.12
COL27A1-206ENST00000490831 STON1Q9Y6Q2 735 aa15.78■□□□□ 0.12
COL27A1-206ENST00000490831 ABCA7Q8IZY2 2146 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 WASH3PC4AMC7 463 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 FOXD2O60548 495 aaPredicted RBP15.77■□□□□ 0.12
COL27A1-206ENST00000490831 TBL1XO60907 577 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 GRAP2O75791 330 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 GFPT2O94808 682 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 CYP1A1P04798 512 aaPredicted RBP15.77■□□□□ 0.12
COL27A1-206ENST00000490831 MMEP08473 750 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 C7P10643 843 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 GBP1P32455 592 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 STAT1P42224 750 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 MATKP42679 507 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 IL12RB1P42701 662 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 CDR2Q01850 454 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 LMNB2Q03252 620 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 MTA1Q13330 715 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 BYSLQ13895 437 aaKnown RBP15.77■□□□□ 0.12
COL27A1-206ENST00000490831 ZNF234Q14588 700 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 PLA2G2CQ5R387 149 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 TAF3Q5VWG9 929 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 ARCQ7LC44 396 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 XYLT1Q86Y38 959 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 AHI1Q8N157 1196 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 FIBINQ8TAL6 211 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 WFDC5Q8TCV5 224 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 C18orf8Q96DM3 657 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 PDCL3Q9H2J4 239 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 NLRC4Q9NPP4 1024 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 ABCB8Q9NUT2 735 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 TMEM51Q9NW97 253 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 DDIT4Q9NX09 232 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 BCCIPQ9P287 314 aaKnown RBP eCLIP15.77■□□□□ 0.12
COL27A1-206ENST00000490831 GGA2Q9UJY4 613 aa15.77■□□□□ 0.12
COL27A1-206ENST00000490831 SMTNL1A8MU46 457 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 PRR5-ARHGAP8B1AHC4 643 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 MOCS2O96007 188 aaPredicted RBP15.76■□□□□ 0.11
COL27A1-206ENST00000490831 ZNF806P0C7X5 589 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 PABPC1P11940 636 aaKnown RBP15.76■□□□□ 0.11
COL27A1-206ENST00000490831 CHRNB2P17787 502 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 NDUFV2P19404 249 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 BCKDHBP21953 392 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 CCR1P32246 355 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 RPS24P62847 133 aaKnown RBP15.76■□□□□ 0.11
COL27A1-206ENST00000490831 ARHGAP8P85298 464 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 FMO1Q01740 532 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 SPDYCQ5MJ68 293 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 OTUD1Q5VV17 481 aaPredicted RBP15.76■□□□□ 0.11
COL27A1-206ENST00000490831 CHST9Q7L1S5 443 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 METTL3Q86U44 580 aaKnown RBP15.76■□□□□ 0.11
COL27A1-206ENST00000490831 ERICH1Q86X53 443 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 ATP6V0D2Q8N8Y2 350 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms